Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 MIR6828-201ENST00000636181 60 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-34-201ENST00000362441 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-12-201ENST00000362583 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-29-201ENST00000362834 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-9-201ENST00000362912 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-21-201ENST00000362963 81 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-14-201ENST00000363090 81 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-13-201ENST00000363358 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-41-201ENST00000363608 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-11-201ENST00000363616 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-5-201ENST00000363633 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-39-201ENST00000363694 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-4-201ENST00000363810 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-16-201ENST00000363887 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-6-201ENST00000363942 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-42-201ENST00000364273 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-15-201ENST00000364809 81 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-1-201ENST00000364961 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-26-201ENST00000365067 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-10-201ENST00000365073 81 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-43-201ENST00000365503 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-36-201ENST00000365629 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 RNU6-811P-201ENST00000384069 107 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 RNU6-648P-201ENST00000410190 107 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 AC244250.2-201ENST00000418731 148 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.55□□□□□ -2.5
FREM3P0C091 MTND1P11-201ENST00000456661 876 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 RNU2-12P-201ENST00000517216 168 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.55□□□□□ -2.5
FREM3P0C091 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 SNORD115-40-201ENST00000606510 82 ntBASIC-0.55□□□□□ -2.5
FREM3P0C091 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 FCF1P9-201ENST00000412546 282 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 SNORD11.1-201ENST00000459482 85 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 RNU6-138P-201ENST00000515952 107 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 RNU6-232P-201ENST00000517144 64 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 MIR2355-201ENST00000517199 87 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 RNA5SP47-201ENST00000517230 109 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.56□□□□□ -2.5
FREM3P0C091 AC125232.2-201ENST00000592457 143 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 AC011921.3-201ENST00000605540 361 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 AC097520.1-201ENST00000624435 385 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 RNU6-740P-201ENST00000364734 105 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 RNU6-652P-201ENST00000365488 107 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 SNORD12B-201ENST00000410433 91 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 RNU6-284P-201ENST00000411105 106 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 USP9YP30-201ENST00000430729 455 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 AC022140.2-201ENST00000623500 188 ntBASIC-0.56□□□□□ -2.5
FREM3P0C091 RNU6-318P-201ENST00000384283 103 ntBASIC-0.57□□□□□ -2.5
FREM3P0C091 RNU6-297P-201ENST00000384636 107 ntBASIC-0.57□□□□□ -2.5
FREM3P0C091 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
FREM3P0C091 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.57□□□□□ -2.5
FREM3P0C091 RNU2-61P-201ENST00000411069 191 ntBASIC-0.57□□□□□ -2.5
FREM3P0C091 PRDX4P1-201ENST00000507189 574 ntBASIC-0.57□□□□□ -2.5
FREM3P0C091 RNU7-161P-201ENST00000517289 62 ntBASIC-0.57□□□□□ -2.5
FREM3P0C091 SNORA70.25-201ENST00000612741 95 ntBASIC-0.57□□□□□ -2.5
FREM3P0C091 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.57□□□□□ -2.5
FREM3P0C091 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.57□□□□□ -2.5
FREM3P0C091 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 SNORA27-201ENST00000384323 126 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 MIR563-201ENST00000385080 79 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 SNORD72-201ENST00000390994 80 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 SNORA75.4-201ENST00000391278 119 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 MTND2P22-201ENST00000444325 1033 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 RPS29P24-201ENST00000486345 171 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 AP003072.1-201ENST00000531740 145 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 MIR3152-201ENST00000579801 74 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 MIR4273-201ENST00000582824 84 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 MIR4436A-201ENST00000585278 85 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 AC245884.10-201ENST00000597355 337 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 AL080274.1-201ENST00000605565 220 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 DISC2.1-201ENST00000612827 205 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.58□□□□□ -2.5
FREM3P0C091 AL596211.1-201ENST00000569873 2277 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 RNY3-201ENST00000365484 102 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 RNU6-38P-201ENST00000384085 107 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 RNU4-70P-201ENST00000384579 139 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.58□□□□□ -2.5
FREM3P0C091 AC236972.2-201ENST00000434979 310 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 AC026782.1-201ENST00000512952 449 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 RNU6-998P-201ENST00000515894 101 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 RNU6-830P-201ENST00000516353 107 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 RNU6-958P-201ENST00000516995 106 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 MIR4491-201ENST00000581087 68 ntBASIC-0.58□□□□□ -2.5
FREM3P0C091 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.58□□□□□ -2.5
FREM3P0C091 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.58□□□□□ -2.5
FREM3P0C091 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.59□□□□□ -2.5
FREM3P0C091 SNORA26.8-201ENST00000391306 124 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms