Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 SNORA40-201ENST00000388090 126 ntBASIC1.99□□□□□ -2.09
RHOP08100 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RHOP08100 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.99□□□□□ -2.09
RHOP08100 RNA5SP233-201ENST00000459153 113 ntBASIC1.99□□□□□ -2.09
RHOP08100 RNU6-504P-201ENST00000516568 104 ntBASIC1.99□□□□□ -2.09
RHOP08100 AC090142.3-201ENST00000519012 385 ntBASIC1.99□□□□□ -2.09
RHOP08100 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
RHOP08100 RNU6-888P-201ENST00000363010 101 ntBASIC1.98□□□□□ -2.09
RHOP08100 RNU6-112P-201ENST00000363599 104 ntBASIC1.98□□□□□ -2.09
RHOP08100 SNORD50B-201ENST00000364995 70 ntBASIC1.98□□□□□ -2.09
RHOP08100 Y_RNA.420-201ENST00000384043 110 ntBASIC1.98□□□□□ -2.09
RHOP08100 Y_RNA.542-201ENST00000384641 111 ntBASIC1.98□□□□□ -2.09
RHOP08100 RNU6-588P-201ENST00000410281 105 ntBASIC1.98□□□□□ -2.09
RHOP08100 HMGN2P38-201ENST00000423806 265 ntBASIC1.98□□□□□ -2.09
RHOP08100 SNRPGP14-201ENST00000435400 219 ntBASIC1.98□□□□□ -2.09
RHOP08100 HSPE1P9-201ENST00000440046 311 ntBASIC1.98□□□□□ -2.09
RHOP08100 STAG3L5P-204ENST00000443759 179 ntBASIC1.98□□□□□ -2.09
RHOP08100 AC090255.1-201ENST00000495779 349 ntBASIC1.98□□□□□ -2.09
RHOP08100 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.98□□□□□ -2.09
RHOP08100 AC006441.5-201ENST00000612680 209 ntBASIC1.98□□□□□ -2.09
RHOP08100 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.98□□□□□ -2.09
RHOP08100 AP001340.1-201ENST00000624405 217 ntBASIC1.98□□□□□ -2.09
RHOP08100 AC091895.1-201ENST00000624494 256 ntBASIC1.98□□□□□ -2.09
RHOP08100 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RHOP08100 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RHOP08100 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RHOP08100 MIRLET7C-201ENST00000362160 84 ntBASIC1.97□□□□□ -2.09
RHOP08100 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
RHOP08100 snoU2-30.1-201ENST00000365012 70 ntBASIC1.97□□□□□ -2.09
RHOP08100 Y_RNA.336-201ENST00000365307 109 ntBASIC1.97□□□□□ -2.09
RHOP08100 RN7SKP200-201ENST00000410564 320 ntBASIC1.97□□□□□ -2.09
RHOP08100 MLLT10P1-201ENST00000418346 262 ntBASIC1.97□□□□□ -2.09
RHOP08100 AL158823.1-201ENST00000418441 478 ntBASIC1.97□□□□□ -2.09
RHOP08100 MTND4LP9-201ENST00000427694 174 ntBASIC1.97□□□□□ -2.09
RHOP08100 HMGN2P32-201ENST00000444648 269 ntBASIC1.97□□□□□ -2.09
RHOP08100 AL021397.1-201ENST00000451806 248 ntBASIC1.97□□□□□ -2.09
RHOP08100 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.97□□□□□ -2.09
RHOP08100 RNA5SP437-201ENST00000517249 129 ntBASIC1.97□□□□□ -2.09
RHOP08100 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.97□□□□□ -2.09
RHOP08100 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.97□□□□□ -2.09
RHOP08100 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.97□□□□□ -2.09
RHOP08100 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
RHOP08100 RNY1P11-201ENST00000363759 113 ntBASIC1.96□□□□□ -2.1
RHOP08100 SNORD14E-201ENST00000364009 85 ntBASIC1.96□□□□□ -2.1
RHOP08100 RNU6-442P-201ENST00000383968 104 ntBASIC1.96□□□□□ -2.1
RHOP08100 SNORD61-201ENST00000384252 73 ntBASIC1.96□□□□□ -2.1
RHOP08100 RNU6-959P-201ENST00000384671 107 ntBASIC1.96□□□□□ -2.1
RHOP08100 MIR548A2-201ENST00000384956 97 ntBASIC1.96□□□□□ -2.1
RHOP08100 MIR624-201ENST00000385217 97 ntBASIC1.96□□□□□ -2.1
RHOP08100 AL034345.1-201ENST00000407768 123 ntBASIC1.96□□□□□ -2.1
RHOP08100 MIR548I2-201ENST00000408348 149 ntBASIC1.96□□□□□ -2.1
RHOP08100 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.96□□□□□ -2.1
RHOP08100 SNRPGP13-201ENST00000442212 177 ntBASIC1.96□□□□□ -2.1
RHOP08100 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
RHOP08100 CYCTP-201ENST00000504253 315 ntBASIC1.96□□□□□ -2.1
RHOP08100 RNA5SP272-201ENST00000516095 111 ntBASIC1.96□□□□□ -2.1
RHOP08100 AC027279.3-201ENST00000625055 122 ntBASIC1.96□□□□□ -2.1
RHOP08100 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RHOP08100 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RHOP08100 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.95□□□□□ -2.1
RHOP08100 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RHOP08100 RNA5SP276-201ENST00000362580 94 ntBASIC1.95□□□□□ -2.1
RHOP08100 RNA5SP190-201ENST00000365222 118 ntBASIC1.95□□□□□ -2.1
RHOP08100 RNU6-1292P-201ENST00000383856 107 ntBASIC1.95□□□□□ -2.1
RHOP08100 MIR9-3-201ENST00000385084 90 ntBASIC1.95□□□□□ -2.1
RHOP08100 MIR802-201ENST00000390235 94 ntBASIC1.95□□□□□ -2.1
RHOP08100 SNORA17.3-201ENST00000391159 129 ntBASIC1.95□□□□□ -2.1
RHOP08100 RNA5SP127-201ENST00000411051 133 ntBASIC1.95□□□□□ -2.1
RHOP08100 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
RHOP08100 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.95□□□□□ -2.1
RHOP08100 AL606753.1-201ENST00000427435 87 ntBASIC1.95□□□□□ -2.1
RHOP08100 AC108667.1-201ENST00000428618 249 ntBASIC1.95□□□□□ -2.1
RHOP08100 SNORD45.4-201ENST00000516629 73 ntBASIC1.95□□□□□ -2.1
RHOP08100 RNA5SP481-201ENST00000516814 122 ntBASIC1.95□□□□□ -2.1
RHOP08100 AC131055.1-201ENST00000584626 316 ntBASIC1.95□□□□□ -2.1
RHOP08100 AC002984.1-201ENST00000591692 448 ntBASIC1.95□□□□□ -2.1
RHOP08100 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.95□□□□□ -2.1
RHOP08100 AL627230.6-201ENST00000611129 280 ntBASIC1.95□□□□□ -2.1
RHOP08100 AC084768.2-201ENST00000622736 221 ntBASIC1.95□□□□□ -2.1
RHOP08100 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.95□□□□□ -2.1
RHOP08100 SNORA4.2-201ENST00000365313 147 ntBASIC1.94□□□□□ -2.1
RHOP08100 RNU6-1336P-201ENST00000383886 109 ntBASIC1.94□□□□□ -2.1
RHOP08100 RNU6-1031P-201ENST00000384773 107 ntBASIC1.94□□□□□ -2.1
RHOP08100 MIR518F-201ENST00000384973 87 ntBASIC1.94□□□□□ -2.1
RHOP08100 Y_RNA.584-201ENST00000391090 114 ntBASIC1.94□□□□□ -2.1
RHOP08100 RNU6-460P-201ENST00000391158 108 ntBASIC1.94□□□□□ -2.1
RHOP08100 RNA5SP100-201ENST00000410903 110 ntBASIC1.94□□□□□ -2.1
RHOP08100 RNA5SP59-201ENST00000410922 110 ntBASIC1.94□□□□□ -2.1
RHOP08100 RPL23AP6-201ENST00000446637 472 ntBASIC1.94□□□□□ -2.1
RHOP08100 Y_RNA.666-201ENST00000516187 112 ntBASIC1.94□□□□□ -2.1
RHOP08100 SNORA25.15-201ENST00000516487 89 ntBASIC1.94□□□□□ -2.1
RHOP08100 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
RHOP08100 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.94□□□□□ -2.1
RHOP08100 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.94□□□□□ -2.1
RHOP08100 MIR3683-201ENST00000580847 82 ntBASIC1.94□□□□□ -2.1
RHOP08100 MIR4448-201ENST00000584360 86 ntBASIC1.94□□□□□ -2.1
RHOP08100 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.94□□□□□ -2.1
RHOP08100 TUG1_4.1-201ENST00000619464 181 ntBASIC1.94□□□□□ -2.1
RHOP08100 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.94□□□□□ -2.1
RHOP08100 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms