Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.98□□□□□ -2.57
TPM3P06753 RNU6-291P-201ENST00000384720 107 ntBASIC-0.98□□□□□ -2.57
TPM3P06753 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.98□□□□□ -2.57
TPM3P06753 MTCO3P40-201ENST00000392516 676 ntBASIC-0.98□□□□□ -2.57
TPM3P06753 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.98□□□□□ -2.57
TPM3P06753 MTND3P7-201ENST00000474435 343 ntBASIC-0.98□□□□□ -2.57
TPM3P06753 RNU6-897P-201ENST00000517135 105 ntBASIC-0.98□□□□□ -2.57
TPM3P06753 MIR5706-201ENST00000579841 80 ntBASIC-0.98□□□□□ -2.57
TPM3P06753 MIR4645-201ENST00000583158 77 ntBASIC-0.98□□□□□ -2.57
TPM3P06753 MIR148A-201ENST00000362215 68 ntBASIC-0.99□□□□□ -2.57
TPM3P06753 RNU6-403P-201ENST00000363163 104 ntBASIC-0.99□□□□□ -2.57
TPM3P06753 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.99□□□□□ -2.57
TPM3P06753 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.99□□□□□ -2.57
TPM3P06753 SNORA75.1-201ENST00000391130 148 ntBASIC-0.99□□□□□ -2.57
TPM3P06753 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.99□□□□□ -2.57
TPM3P06753 RNU1-54P-201ENST00000517181 120 ntBASIC-0.99□□□□□ -2.57
TPM3P06753 DISC2.1-201ENST00000612827 205 ntBASIC-0.99□□□□□ -2.57
TPM3P06753 AL050303.3-201ENST00000613704 284 ntBASIC-0.99□□□□□ -2.57
TPM3P06753 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.99□□□□□ -2.57
TPM3P06753 Y_RNA.146-201ENST00000363549 102 ntBASIC-1□□□□□ -2.57
TPM3P06753 Y_RNA.341-201ENST00000365341 102 ntBASIC-1□□□□□ -2.57
TPM3P06753 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1□□□□□ -2.57
TPM3P06753 RNU7-115P-201ENST00000516433 55 ntBASIC-1□□□□□ -2.57
TPM3P06753 RNU6-966P-201ENST00000516479 104 ntBASIC-1□□□□□ -2.57
TPM3P06753 MIR2355-201ENST00000517199 87 ntBASIC-1□□□□□ -2.57
TPM3P06753 IGLVI-20-201ENST00000519296 130 ntBASIC-1□□□□□ -2.57
TPM3P06753 AC018462.2-201ENST00000605375 395 ntBASIC-1□□□□□ -2.57
TPM3P06753 MIR8064-201ENST00000612863 90 ntBASIC-1□□□□□ -2.57
TPM3P06753 AC010205.1-201ENST00000616668 449 ntBASIC-1□□□□□ -2.57
TPM3P06753 AL162726.3-218ENST00000636401 95 ntBASIC-1□□□□□ -2.57
TPM3P06753 MIR4788-201ENST00000639104 80 ntBASIC-1□□□□□ -2.57
TPM3P06753 SNORD114-28-201ENST00000363610 72 ntBASIC-1.01□□□□□ -2.57
TPM3P06753 MIR548O-201ENST00000408583 114 ntBASIC-1.01□□□□□ -2.57
TPM3P06753 RPL21P38-201ENST00000418090 167 ntBASIC-1.01□□□□□ -2.57
TPM3P06753 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.01□□□□□ -2.57
TPM3P06753 RPL39P25-201ENST00000449384 154 ntBASIC-1.01□□□□□ -2.57
TPM3P06753 RNU6-475P-201ENST00000516073 104 ntBASIC-1.01□□□□□ -2.57
TPM3P06753 AC138749.4-201ENST00000563970 127 ntBASIC-1.01□□□□□ -2.57
TPM3P06753 MIR4677-201ENST00000584153 80 ntBASIC-1.01□□□□□ -2.57
TPM3P06753 SNORA70.25-201ENST00000612741 95 ntBASIC-1.01□□□□□ -2.57
TPM3P06753 FTX_2.1-201ENST00000618816 94 ntBASIC-1.01□□□□□ -2.57
TPM3P06753 AL109933.3-201ENST00000619095 188 ntBASIC-1.01□□□□□ -2.57
TPM3P06753 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.02□□□□□ -2.57
TPM3P06753 RNU6-535P-201ENST00000384722 107 ntBASIC-1.02□□□□□ -2.57
TPM3P06753 MIR329-2-201ENST00000385029 84 ntBASIC-1.02□□□□□ -2.57
TPM3P06753 MIR196A2-201ENST00000385189 110 ntBASIC-1.02□□□□□ -2.57
TPM3P06753 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.02□□□□□ -2.57
TPM3P06753 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-1.02□□□□□ -2.57
TPM3P06753 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.02□□□□□ -2.57
TPM3P06753 MIR378D2-201ENST00000580636 98 ntBASIC-1.02□□□□□ -2.57
TPM3P06753 MIR4263-201ENST00000584745 83 ntBASIC-1.02□□□□□ -2.57
TPM3P06753 MIR3942-201ENST00000585264 109 ntBASIC-1.02□□□□□ -2.57
TPM3P06753 SNORD114-31-201ENST00000363219 75 ntBASIC-1.03□□□□□ -2.57
TPM3P06753 Y_RNA.115-201ENST00000363272 98 ntBASIC-1.03□□□□□ -2.57
TPM3P06753 SNORA40.5-201ENST00000391061 128 ntBASIC-1.03□□□□□ -2.57
TPM3P06753 MTND2P22-201ENST00000444325 1033 ntBASIC-1.03□□□□□ -2.57
TPM3P06753 SNORD11-201ENST00000459124 84 ntBASIC-1.03□□□□□ -2.57
TPM3P06753 RNU6-437P-201ENST00000459408 95 ntBASIC-1.03□□□□□ -2.57
TPM3P06753 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.04□□□□□ -2.58
TPM3P06753 MIR1278-201ENST00000408753 81 ntBASIC-1.04□□□□□ -2.58
TPM3P06753 RNU4-30P-201ENST00000410245 143 ntBASIC-1.04□□□□□ -2.58
TPM3P06753 AC109327.2-201ENST00000448339 378 ntBASIC-1.04□□□□□ -2.58
TPM3P06753 TRBVB-201ENST00000477100 408 ntBASIC-1.04□□□□□ -2.58
TPM3P06753 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.04□□□□□ -2.58
TPM3P06753 Y_RNA.696-201ENST00000516725 107 ntBASIC-1.04□□□□□ -2.58
TPM3P06753 MIR6128-201ENST00000615528 109 ntBASIC-1.04□□□□□ -2.58
TPM3P06753 MIR548AZ-201ENST00000616567 95 ntBASIC-1.04□□□□□ -2.58
TPM3P06753 MIR548AY-201ENST00000617669 107 ntBASIC-1.04□□□□□ -2.58
TPM3P06753 Y_RNA.85-201ENST00000363014 111 ntBASIC-1.05□□□□□ -2.58
TPM3P06753 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.05□□□□□ -2.58
TPM3P06753 MTND5P34-201ENST00000568888 325 ntBASIC-1.05□□□□□ -2.58
TPM3P06753 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.05□□□□□ -2.58
TPM3P06753 AL162376.1-201ENST00000624117 175 ntBASIC-1.05□□□□□ -2.58
TPM3P06753 MIR6863-201ENST00000636112 90 ntBASIC-1.05□□□□□ -2.58
TPM3P06753 RNU6-708P-201ENST00000384217 107 ntBASIC-1.06□□□□□ -2.58
TPM3P06753 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.06□□□□□ -2.58
TPM3P06753 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.06□□□□□ -2.58
TPM3P06753 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.06□□□□□ -2.58
TPM3P06753 RNU6-284P-201ENST00000411105 106 ntBASIC-1.06□□□□□ -2.58
TPM3P06753 RNU2-11P-201ENST00000459191 187 ntBASIC-1.06□□□□□ -2.58
TPM3P06753 RPS29P24-201ENST00000486345 171 ntBASIC-1.06□□□□□ -2.58
TPM3P06753 AC024933.1-201ENST00000608472 348 ntBASIC-1.06□□□□□ -2.58
TPM3P06753 uc_338.36-201ENST00000622331 158 ntBASIC-1.06□□□□□ -2.58
TPM3P06753 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.07□□□□□ -2.58
TPM3P06753 RNU6-674P-201ENST00000363831 107 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 RNU4-50P-201ENST00000364361 141 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 SNORA22B-201ENST00000383876 138 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 RNU6-926P-201ENST00000384075 107 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 SNORA27-201ENST00000384323 126 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 SNORA32.3-201ENST00000384772 121 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
TPM3P06753 U8.15-201ENST00000390947 134 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 RNU6-956P-201ENST00000458868 103 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.07□□□□□ -2.58
TPM3P06753 AC026782.1-201ENST00000512952 449 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 RNU6-470P-201ENST00000515954 104 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 AP003072.1-201ENST00000531740 145 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 AL512360.1-201ENST00000555346 234 ntBASIC-1.07□□□□□ -2.58
TPM3P06753 MIR4491-201ENST00000581087 68 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 215.6 ms