Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RN7SL274P-201ENST00000492268 272 ntBASIC2.31□□□□□ -2.04
APPP05067 RNU7-25P-201ENST00000516544 62 ntBASIC2.31□□□□□ -2.04
APPP05067 MIR4709-201ENST00000577272 72 ntBASIC2.31□□□□□ -2.04
APPP05067 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.31□□□□□ -2.04
APPP05067 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.31□□□□□ -2.04
APPP05067 RNU6-268P-201ENST00000364174 107 ntBASIC2.3□□□□□ -2.04
APPP05067 Y_RNA.337-201ENST00000365312 102 ntBASIC2.3□□□□□ -2.04
APPP05067 RNY1P5-201ENST00000383890 115 ntBASIC2.3□□□□□ -2.04
APPP05067 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
APPP05067 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.3□□□□□ -2.04
APPP05067 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.3□□□□□ -2.04
APPP05067 snoU13.23-201ENST00000458863 104 ntBASIC2.3□□□□□ -2.04
APPP05067 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.3□□□□□ -2.04
APPP05067 MIR3129-201ENST00000581095 76 ntBASIC2.3□□□□□ -2.04
APPP05067 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.3□□□□□ -2.04
APPP05067 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APPP05067 MTND5P32-201ENST00000560711 1802 ntBASIC2.29□□□□□ -2.04
APPP05067 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
APPP05067 Y_RNA.393-201ENST00000383936 102 ntBASIC2.29□□□□□ -2.04
APPP05067 MIR518F-201ENST00000384973 87 ntBASIC2.29□□□□□ -2.04
APPP05067 SNORD37.2-201ENST00000391075 66 ntBASIC2.29□□□□□ -2.04
APPP05067 SNORA40.18-201ENST00000391200 128 ntBASIC2.29□□□□□ -2.04
APPP05067 RNA5SP338-201ENST00000410495 85 ntBASIC2.29□□□□□ -2.04
APPP05067 RNU2-55P-201ENST00000411146 174 ntBASIC2.29□□□□□ -2.04
APPP05067 AC069257.2-201ENST00000441819 155 ntBASIC2.29□□□□□ -2.04
APPP05067 RNU7-197P-201ENST00000458836 62 ntBASIC2.29□□□□□ -2.04
APPP05067 RPL23AP42-201ENST00000471152 471 ntBASIC2.29□□□□□ -2.04
APPP05067 AC092991.1-201ENST00000477176 376 ntBASIC2.29□□□□□ -2.04
APPP05067 AC097639.2-201ENST00000603159 172 ntBASIC2.29□□□□□ -2.04
APPP05067 U1.36-201ENST00000620684 176 ntBASIC2.29□□□□□ -2.04
APPP05067 MIR6844-201ENST00000637122 62 ntBASIC2.29□□□□□ -2.04
APPP05067 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
APPP05067 snoU2-30.1-201ENST00000365012 70 ntBASIC2.28□□□□□ -2.04
APPP05067 MIR516B2-201ENST00000385190 85 ntBASIC2.28□□□□□ -2.04
APPP05067 AL034345.1-201ENST00000407768 123 ntBASIC2.28□□□□□ -2.04
APPP05067 SNORA79-201ENST00000408376 140 ntBASIC2.28□□□□□ -2.04
APPP05067 RNU7-12P-201ENST00000516030 62 ntBASIC2.28□□□□□ -2.04
APPP05067 RNU6-693P-201ENST00000516134 107 ntBASIC2.28□□□□□ -2.04
APPP05067 RNU6-365P-201ENST00000517113 106 ntBASIC2.28□□□□□ -2.04
APPP05067 MIR3122-201ENST00000577243 73 ntBASIC2.28□□□□□ -2.04
APPP05067 MIR3935-201ENST00000583472 104 ntBASIC2.28□□□□□ -2.04
APPP05067 AC092881.1-201ENST00000638218 2733 ntBASIC2.27□□□□□ -2.05
APPP05067 SNORD14E-201ENST00000364009 85 ntBASIC2.27□□□□□ -2.05
APPP05067 Y_RNA.488-201ENST00000384403 102 ntBASIC2.27□□□□□ -2.05
APPP05067 MIR548O-201ENST00000408583 114 ntBASIC2.27□□□□□ -2.05
APPP05067 RNA5SP153-201ENST00000516498 76 ntBASIC2.27□□□□□ -2.05
APPP05067 RNU7-28P-201ENST00000516759 62 ntBASIC2.27□□□□□ -2.05
APPP05067 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.27□□□□□ -2.05
APPP05067 AC112693.2-201ENST00000556538 232 ntBASIC2.27□□□□□ -2.05
APPP05067 MIR4299-201ENST00000577899 72 ntBASIC2.27□□□□□ -2.05
APPP05067 MIR3910-1-201ENST00000580936 111 ntBASIC2.27□□□□□ -2.05
APPP05067 AC106754.2-201ENST00000623006 233 ntBASIC2.27□□□□□ -2.05
APPP05067 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.27□□□□□ -2.05
APPP05067 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
APPP05067 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
APPP05067 MIR583-201ENST00000384846 75 ntBASIC2.26□□□□□ -2.05
APPP05067 MIR526A1-201ENST00000384897 85 ntBASIC2.26□□□□□ -2.05
APPP05067 MIR802-201ENST00000390235 94 ntBASIC2.26□□□□□ -2.05
APPP05067 AF228730.3-201ENST00000436691 102 ntBASIC2.26□□□□□ -2.05
APPP05067 AC003989.2-201ENST00000440224 169 ntBASIC2.26□□□□□ -2.05
APPP05067 AC015712.3-201ENST00000559380 164 ntBASIC2.26□□□□□ -2.05
APPP05067 DEFB122-202ENST00000569013 197 ntBASIC2.26□□□□□ -2.05
APPP05067 SNORA28-201ENST00000606769 126 ntBASIC2.26□□□□□ -2.05
APPP05067 AL773524.1-201ENST00000614065 229 ntBASIC2.26□□□□□ -2.05
APPP05067 AC015726.2-201ENST00000620112 122 ntBASIC2.26□□□□□ -2.05
APPP05067 MTND1P7-201ENST00000632801 297 ntBASIC2.26□□□□□ -2.05
APPP05067 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
APPP05067 AL157777.2-201ENST00000258070 137 ntBASIC2.25□□□□□ -2.05
APPP05067 RNU6-457P-201ENST00000363999 107 ntBASIC2.25□□□□□ -2.05
APPP05067 Y_RNA.547-201ENST00000384654 119 ntBASIC2.25□□□□□ -2.05
APPP05067 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
APPP05067 MIR764-201ENST00000390811 85 ntBASIC2.25□□□□□ -2.05
APPP05067 AL591806.2-201ENST00000433122 173 ntBASIC2.25□□□□□ -2.05
APPP05067 PGBD4P5-201ENST00000445958 426 ntBASIC2.25□□□□□ -2.05
APPP05067 MIR548X2-201ENST00000579776 100 ntBASIC2.25□□□□□ -2.05
APPP05067 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
APPP05067 RNU6-199P-201ENST00000362954 107 ntBASIC2.24□□□□□ -2.05
APPP05067 Y_RNA.251-201ENST00000364551 99 ntBASIC2.24□□□□□ -2.05
APPP05067 RNU6-442P-201ENST00000383968 104 ntBASIC2.24□□□□□ -2.05
APPP05067 Y_RNA.568-201ENST00000384742 113 ntBASIC2.24□□□□□ -2.05
APPP05067 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
APPP05067 RNU6-257P-201ENST00000410238 98 ntBASIC2.24□□□□□ -2.05
APPP05067 SNRPGP13-201ENST00000442212 177 ntBASIC2.24□□□□□ -2.05
APPP05067 CYCTP-201ENST00000504253 315 ntBASIC2.24□□□□□ -2.05
APPP05067 RNA5SP182-201ENST00000516064 82 ntBASIC2.24□□□□□ -2.05
APPP05067 Y_RNA.686-201ENST00000516548 134 ntBASIC2.24□□□□□ -2.05
APPP05067 AC090142.3-201ENST00000519012 385 ntBASIC2.24□□□□□ -2.05
APPP05067 SUMO2P16-201ENST00000519475 264 ntBASIC2.24□□□□□ -2.05
APPP05067 AL160236.1-201ENST00000556317 195 ntBASIC2.24□□□□□ -2.05
APPP05067 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
APPP05067 ZNF355P-201ENST00000427301 3216 ntBASIC2.23□□□□□ -2.05
APPP05067 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
APPP05067 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.23□□□□□ -2.05
APPP05067 RNU6-888P-201ENST00000363010 101 ntBASIC2.23□□□□□ -2.05
APPP05067 Y_RNA.294-201ENST00000364916 102 ntBASIC2.23□□□□□ -2.05
APPP05067 RNU6-597P-201ENST00000365620 102 ntBASIC2.23□□□□□ -2.05
APPP05067 Y_RNA.420-201ENST00000384043 110 ntBASIC2.23□□□□□ -2.05
APPP05067 Y_RNA.494-201ENST00000384432 111 ntBASIC2.23□□□□□ -2.05
APPP05067 Y_RNA.497-201ENST00000384447 98 ntBASIC2.23□□□□□ -2.05
APPP05067 U8.13-201ENST00000390842 128 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms