Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 RNU6-290P-201ENST00000365212 101 ntBASIC0.84□□□□□ -2.27
MMP1P03956 Y_RNA.569-201ENST00000384749 103 ntBASIC0.84□□□□□ -2.27
MMP1P03956 MIR516B2-201ENST00000385190 85 ntBASIC0.84□□□□□ -2.27
MMP1P03956 RNU6-763P-201ENST00000390865 106 ntBASIC0.84□□□□□ -2.27
MMP1P03956 MIR936-201ENST00000401264 98 ntBASIC0.84□□□□□ -2.27
MMP1P03956 RNU6-985P-201ENST00000410182 104 ntBASIC0.84□□□□□ -2.27
MMP1P03956 SNORA36B-201ENST00000410438 131 ntBASIC0.84□□□□□ -2.27
MMP1P03956 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.84□□□□□ -2.27
MMP1P03956 Y_RNA.637-201ENST00000459424 114 ntBASIC0.84□□□□□ -2.27
MMP1P03956 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
MMP1P03956 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.84□□□□□ -2.27
MMP1P03956 MRPS35P2-201ENST00000508242 191 ntBASIC0.84□□□□□ -2.27
MMP1P03956 MIR1273G-201ENST00000577677 100 ntBASIC0.84□□□□□ -2.27
MMP1P03956 AL590095.2-201ENST00000604136 117 ntBASIC0.84□□□□□ -2.27
MMP1P03956 MIR6866-201ENST00000638146 69 ntBASIC0.84□□□□□ -2.27
MMP1P03956 Y_RNA.16-201ENST00000362421 102 ntBASIC0.83□□□□□ -2.28
MMP1P03956 RNU6-674P-201ENST00000363831 107 ntBASIC0.83□□□□□ -2.28
MMP1P03956 MIR452-201ENST00000385020 85 ntBASIC0.83□□□□□ -2.28
MMP1P03956 RNU6-131P-201ENST00000391144 107 ntBASIC0.83□□□□□ -2.28
MMP1P03956 SNRPGP14-201ENST00000435400 219 ntBASIC0.83□□□□□ -2.28
MMP1P03956 AC002429.1-201ENST00000437672 148 ntBASIC0.83□□□□□ -2.28
MMP1P03956 MTND5P22-201ENST00000458380 195 ntBASIC0.83□□□□□ -2.28
MMP1P03956 U8.19-201ENST00000459095 133 ntBASIC0.83□□□□□ -2.28
MMP1P03956 RNU6-437P-201ENST00000459408 95 ntBASIC0.83□□□□□ -2.28
MMP1P03956 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.83□□□□□ -2.28
MMP1P03956 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.83□□□□□ -2.28
MMP1P03956 MIR3192-201ENST00000584920 77 ntBASIC0.83□□□□□ -2.28
MMP1P03956 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
MMP1P03956 Y_RNA.11-201ENST00000362375 109 ntBASIC0.82□□□□□ -2.28
MMP1P03956 snoU2-30.1-201ENST00000365012 70 ntBASIC0.82□□□□□ -2.28
MMP1P03956 AC113618.1-201ENST00000416747 285 ntBASIC0.82□□□□□ -2.28
MMP1P03956 RPL39P39-201ENST00000455840 151 ntBASIC0.82□□□□□ -2.28
MMP1P03956 RPS26P48-201ENST00000491713 339 ntBASIC0.82□□□□□ -2.28
MMP1P03956 RNU6-947P-201ENST00000516264 106 ntBASIC0.82□□□□□ -2.28
MMP1P03956 RNY3P15-201ENST00000516297 97 ntBASIC0.82□□□□□ -2.28
MMP1P03956 SNORA40.15-201ENST00000516884 107 ntBASIC0.82□□□□□ -2.28
MMP1P03956 AP003733.2-201ENST00000529409 171 ntBASIC0.82□□□□□ -2.28
MMP1P03956 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.82□□□□□ -2.28
MMP1P03956 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.82□□□□□ -2.28
MMP1P03956 RNU6-1084P-201ENST00000362498 107 ntBASIC0.81□□□□□ -2.28
MMP1P03956 Y_RNA.84-201ENST00000363011 104 ntBASIC0.81□□□□□ -2.28
MMP1P03956 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
MMP1P03956 SNORA80D-201ENST00000384488 135 ntBASIC0.81□□□□□ -2.28
MMP1P03956 MIR508-201ENST00000384857 115 ntBASIC0.81□□□□□ -2.28
MMP1P03956 RNU6-1248P-201ENST00000391096 64 ntBASIC0.81□□□□□ -2.28
MMP1P03956 MTCO2P33-201ENST00000402100 465 ntBASIC0.81□□□□□ -2.28
MMP1P03956 AL603910.2-201ENST00000407268 136 ntBASIC0.81□□□□□ -2.28
MMP1P03956 SNORD11-201ENST00000459124 84 ntBASIC0.81□□□□□ -2.28
MMP1P03956 AC091959.1-201ENST00000495857 238 ntBASIC0.81□□□□□ -2.28
MMP1P03956 SNORD111.1-201ENST00000516421 86 ntBASIC0.81□□□□□ -2.28
MMP1P03956 RNU2-31P-201ENST00000516954 155 ntBASIC0.81□□□□□ -2.28
MMP1P03956 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.81□□□□□ -2.28
MMP1P03956 RNU6-1272P-201ENST00000362776 107 ntBASIC0.8□□□□□ -2.28
MMP1P03956 SNORD114-23-201ENST00000363536 72 ntBASIC0.8□□□□□ -2.28
MMP1P03956 Y_RNA.217-201ENST00000364214 105 ntBASIC0.8□□□□□ -2.28
MMP1P03956 RNU1-36P-201ENST00000365130 165 ntBASIC0.8□□□□□ -2.28
MMP1P03956 RNU6-326P-201ENST00000365480 107 ntBASIC0.8□□□□□ -2.28
MMP1P03956 RNU6-639P-201ENST00000384074 107 ntBASIC0.8□□□□□ -2.28
MMP1P03956 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
MMP1P03956 SNORD72-201ENST00000390994 80 ntBASIC0.8□□□□□ -2.28
MMP1P03956 AL731563.1-201ENST00000442202 214 ntBASIC0.8□□□□□ -2.28
MMP1P03956 Y_RNA.641-201ENST00000459414 105 ntBASIC0.8□□□□□ -2.28
MMP1P03956 SNORD124-201ENST00000459577 104 ntBASIC0.8□□□□□ -2.28
MMP1P03956 SNORA74.3-201ENST00000517108 154 ntBASIC0.8□□□□□ -2.28
MMP1P03956 AP003072.1-201ENST00000531740 145 ntBASIC0.8□□□□□ -2.28
MMP1P03956 RPL23AP91-201ENST00000569211 455 ntBASIC0.8□□□□□ -2.28
MMP1P03956 AC008507.4-201ENST00000585464 127 ntBASIC0.8□□□□□ -2.28
MMP1P03956 PRELID3BP2-201ENST00000605362 201 ntBASIC0.8□□□□□ -2.28
MMP1P03956 AL391903.3-201ENST00000612158 163 ntBASIC0.8□□□□□ -2.28
MMP1P03956 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.8□□□□□ -2.28
MMP1P03956 Y_RNA.30-201ENST00000362572 97 ntBASIC0.79□□□□□ -2.28
MMP1P03956 RNA5SP457-201ENST00000363657 124 ntBASIC0.79□□□□□ -2.28
MMP1P03956 RNU6-899P-201ENST00000363947 107 ntBASIC0.79□□□□□ -2.28
MMP1P03956 Y_RNA.326-201ENST00000365176 113 ntBASIC0.79□□□□□ -2.28
MMP1P03956 RNU6-662P-201ENST00000384253 104 ntBASIC0.79□□□□□ -2.28
MMP1P03956 MIR200A-201ENST00000384875 90 ntBASIC0.79□□□□□ -2.28
MMP1P03956 MIR136-201ENST00000385207 82 ntBASIC0.79□□□□□ -2.28
MMP1P03956 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
MMP1P03956 HMGN2P32-201ENST00000444648 269 ntBASIC0.79□□□□□ -2.28
MMP1P03956 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.79□□□□□ -2.28
MMP1P03956 RNU7-41P-201ENST00000515917 61 ntBASIC0.79□□□□□ -2.28
MMP1P03956 AP003716.2-201ENST00000528260 108 ntBASIC0.79□□□□□ -2.28
MMP1P03956 AL512605.2-201ENST00000592972 256 ntBASIC0.79□□□□□ -2.28
MMP1P03956 AL021707.8-201ENST00000609428 183 ntBASIC0.79□□□□□ -2.28
MMP1P03956 AL008718.3-201ENST00000610217 321 ntBASIC0.79□□□□□ -2.28
MMP1P03956 AC013791.1-201ENST00000616619 62 ntBASIC0.79□□□□□ -2.28
MMP1P03956 AC010487.4-201ENST00000637027 61 ntBASIC0.79□□□□□ -2.28
MMP1P03956 RNU6-268P-201ENST00000364174 107 ntBASIC0.78□□□□□ -2.28
MMP1P03956 Y_RNA.512-201ENST00000384518 102 ntBASIC0.78□□□□□ -2.28
MMP1P03956 RNU6-1109P-201ENST00000391187 107 ntBASIC0.78□□□□□ -2.28
MMP1P03956 RNU6-1203P-201ENST00000410703 110 ntBASIC0.78□□□□□ -2.28
MMP1P03956 RNU6-383P-201ENST00000410864 94 ntBASIC0.78□□□□□ -2.28
MMP1P03956 SNORD123-201ENST00000459473 70 ntBASIC0.78□□□□□ -2.28
MMP1P03956 SNORA18.7-201ENST00000516910 131 ntBASIC0.78□□□□□ -2.28
MMP1P03956 AC087685.1-201ENST00000587507 141 ntBASIC0.78□□□□□ -2.28
MMP1P03956 JPX_2.1-201ENST00000614161 69 ntBASIC0.78□□□□□ -2.28
MMP1P03956 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
MMP1P03956 Y_RNA.152-201ENST00000363578 100 ntBASIC0.77□□□□□ -2.29
MMP1P03956 SNORD14E-201ENST00000364009 85 ntBASIC0.77□□□□□ -2.29
MMP1P03956 SNORD28B-201ENST00000390993 75 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms