Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU6-180P-201ENST00000516697 61 ntBASIC-0.25□□□□□ -2.45
COL1A1P02452 SNORA31.14-201ENST00000516728 116 ntBASIC-0.25□□□□□ -2.45
COL1A1P02452 RNU6-897P-201ENST00000517135 105 ntBASIC-0.25□□□□□ -2.45
COL1A1P02452 LRRC34P1-201ENST00000542742 915 ntBASIC-0.25□□□□□ -2.45
COL1A1P02452 AC134878.1-201ENST00000619901 243 ntBASIC-0.25□□□□□ -2.45
COL1A1P02452 MIR655-201ENST00000362159 97 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 MIR587-201ENST00000384845 96 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 RNU6-648P-201ENST00000410190 107 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 MTND3P21-201ENST00000433774 331 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 MTND1P17-201ENST00000448961 204 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 RNU7-73P-201ENST00000458743 63 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 SNORA40.9-201ENST00000515895 93 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 RN7SKP298-201ENST00000515950 94 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 RNU6-256P-201ENST00000516747 97 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 MTATP6P24-201ENST00000576835 677 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.26□□□□□ -2.45
COL1A1P02452 MIR6507-201ENST00000613630 70 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.26□□□□□ -2.45
COL1A1P02452 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.27□□□□□ -2.45
COL1A1P02452 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 SNORD115-30-201ENST00000364117 82 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 RNA5SP245-201ENST00000364239 121 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 RNU6-740P-201ENST00000364734 105 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 SNORA26.5-201ENST00000391215 123 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 RNU6-735P-201ENST00000410612 107 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 RNU6-284P-201ENST00000411105 106 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 MCFD2P1-201ENST00000417812 300 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 AC244250.2-201ENST00000418731 148 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 SNRPGP14-201ENST00000435400 219 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 MIR3152-201ENST00000579801 74 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL1A1P02452 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.27□□□□□ -2.45
COL1A1P02452 RNU6-490P-201ENST00000362985 107 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 RNU6-269P-201ENST00000391077 97 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 RNU6-192P-201ENST00000391253 100 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 MIR1257-201ENST00000408490 117 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 AC236972.2-201ENST00000434979 310 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL1A1P02452 RNU7-67P-201ENST00000459003 62 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 SNORA18.4-201ENST00000516440 124 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 RNU6-835P-201ENST00000516974 104 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 MTND5P34-201ENST00000568888 325 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 NAMPTP3-201ENST00000569273 224 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.28□□□□□ -2.45
COL1A1P02452 JPX_2.1-201ENST00000614161 69 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 AC244669.1-204ENST00000621564 178 ntBASIC-0.28□□□□□ -2.45
COL1A1P02452 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 SNORD14C-201ENST00000365382 88 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 MIR518F-201ENST00000384973 87 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 AL031003.1-201ENST00000404229 172 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 MTCO1P5-201ENST00000433573 344 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL1A1P02452 POLR2KP2-201ENST00000438155 177 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL1A1P02452 RNU6-408P-201ENST00000515910 100 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 RNU7-116P-201ENST00000516940 62 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 RNA5SP47-201ENST00000517230 109 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 RNU2-60P-201ENST00000517290 128 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 POLR3GP1-201ENST00000594073 261 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 AC121247.2-201ENST00000604776 136 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 AL590491.3-201ENST00000610731 82 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 MIR8055-201ENST00000610739 97 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 U8.6-201ENST00000364939 135 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 RNU6-597P-201ENST00000365620 102 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 RNU6-767P-201ENST00000384132 107 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 SNORD12C-201ENST00000386307 89 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 SNORA3B-201ENST00000391305 131 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
COL1A1P02452 MIR548L-201ENST00000408303 86 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 SNORD12B-201ENST00000410433 91 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 RNU2-61P-201ENST00000411069 191 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 AC023449.1-201ENST00000454464 154 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 MTND3P7-201ENST00000474435 343 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.29□□□□□ -2.46
COL1A1P02452 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL1A1P02452 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 RNU6-958P-201ENST00000516995 106 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 MTND1P24-201ENST00000552175 861 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 MIR4432-201ENST00000581823 84 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 MIR4677-201ENST00000584153 80 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 MIR548AD-201ENST00000584780 82 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 AC006441.5-201ENST00000612680 209 ntBASIC-0.29□□□□□ -2.46
COL1A1P02452 DISC2.1-201ENST00000612827 205 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms