Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AL392103.1-201ENST00000447000 198 ntBASIC0.92□□□□□ -2.26
GGPS1O95749 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.92□□□□□ -2.26
GGPS1O95749 RNA5SP436-201ENST00000516020 115 ntBASIC0.92□□□□□ -2.26
GGPS1O95749 ACA64.5-201ENST00000516207 127 ntBASIC0.92□□□□□ -2.26
GGPS1O95749 RNU6-197P-201ENST00000516680 100 ntBASIC0.92□□□□□ -2.26
GGPS1O95749 DEFB108E-201ENST00000524692 240 ntBASIC0.92□□□□□ -2.26
GGPS1O95749 Y_RNA.128-201ENST00000363391 112 ntBASIC0.91□□□□□ -2.26
GGPS1O95749 RNU5E-4P-201ENST00000364931 120 ntBASIC0.91□□□□□ -2.26
GGPS1O95749 RNU6-144P-201ENST00000383951 107 ntBASIC0.91□□□□□ -2.26
GGPS1O95749 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.91□□□□□ -2.26
GGPS1O95749 MIR1302-7-201ENST00000408841 72 ntBASIC0.91□□□□□ -2.26
GGPS1O95749 AC004941.2-201ENST00000427009 228 ntBASIC0.91□□□□□ -2.26
GGPS1O95749 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.91□□□□□ -2.26
GGPS1O95749 AC109810.1-201ENST00000534066 224 ntBASIC0.91□□□□□ -2.26
GGPS1O95749 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.91□□□□□ -2.26
GGPS1O95749 AC023827.1-201ENST00000569247 97 ntBASIC0.91□□□□□ -2.26
GGPS1O95749 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
GGPS1O95749 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
GGPS1O95749 Y_RNA.105-201ENST00000363182 111 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 RNU6-1205P-201ENST00000363625 106 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 RNU6-867P-201ENST00000364956 107 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 RNU6-290P-201ENST00000365212 101 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 Y_RNA.394-201ENST00000383942 103 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 U8.17-201ENST00000391292 132 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 RNU6-121P-201ENST00000410525 99 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 RNU2-64P-201ENST00000411315 191 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 MTND4LP30-201ENST00000454092 297 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 MRPS35P2-201ENST00000508242 191 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 AC015726.2-201ENST00000620112 122 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 AC134503.1-201ENST00000633048 54 ntBASIC0.9□□□□□ -2.27
GGPS1O95749 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
GGPS1O95749 Y_RNA.535-201ENST00000384612 99 ntBASIC0.89□□□□□ -2.27
GGPS1O95749 RNU6-1067P-201ENST00000384752 107 ntBASIC0.89□□□□□ -2.27
GGPS1O95749 MIR608-201ENST00000384820 100 ntBASIC0.89□□□□□ -2.27
GGPS1O95749 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
GGPS1O95749 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
GGPS1O95749 SNORA40.15-201ENST00000516884 107 ntBASIC0.89□□□□□ -2.27
GGPS1O95749 AC106800.4-201ENST00000614905 153 ntBASIC0.89□□□□□ -2.27
GGPS1O95749 Y_RNA.61-201ENST00000362835 102 ntBASIC0.88□□□□□ -2.27
GGPS1O95749 Y_RNA.276-201ENST00000364732 109 ntBASIC0.88□□□□□ -2.27
GGPS1O95749 SNORA22B-201ENST00000383876 138 ntBASIC0.88□□□□□ -2.27
GGPS1O95749 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.88□□□□□ -2.27
GGPS1O95749 Y_RNA.711-201ENST00000516993 102 ntBASIC0.88□□□□□ -2.27
GGPS1O95749 MIR4714-201ENST00000580728 77 ntBASIC0.88□□□□□ -2.27
GGPS1O95749 AC013791.1-201ENST00000616619 62 ntBASIC0.88□□□□□ -2.27
GGPS1O95749 PVT1_3.1-201ENST00000620853 95 ntBASIC0.88□□□□□ -2.27
GGPS1O95749 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
GGPS1O95749 SNORA1.2-201ENST00000365189 134 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 Y_RNA.537-201ENST00000384626 109 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 MIR548P-201ENST00000408336 84 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 Y_RNA.637-201ENST00000459424 114 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 RNU4-57P-201ENST00000515980 135 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 RNU2-31P-201ENST00000516954 155 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 RNU7-181P-201ENST00000517234 74 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 AC036111.3-201ENST00000526389 112 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 AL512605.2-201ENST00000592972 256 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 AL355297.3-201ENST00000604082 446 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 AL021707.8-201ENST00000609428 183 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.87□□□□□ -2.27
GGPS1O95749 AC022140.2-201ENST00000623500 188 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 MIR6516-201ENST00000630554 81 ntBASIC0.87□□□□□ -2.27
GGPS1O95749 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
GGPS1O95749 RNU6-1272P-201ENST00000362776 107 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 Y_RNA.158-201ENST00000363651 101 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 SNORA51.10-201ENST00000384418 136 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 Y_RNA.540-201ENST00000384638 111 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 MIR598-201ENST00000384868 97 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 MIR570-201ENST00000384917 97 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 SNORA53-201ENST00000391141 249 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 SNORD111-201ENST00000408139 94 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 AC023449.1-201ENST00000454464 154 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 AC131281.1-201ENST00000522984 164 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 AC013244.2-201ENST00000603396 103 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 AC037487.3-201ENST00000606668 112 ntBASIC0.86□□□□□ -2.27
GGPS1O95749 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
GGPS1O95749 SNORA25.1-201ENST00000362326 128 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 snoU2_19.2-201ENST00000363024 80 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 Y_RNA.138-201ENST00000363462 102 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 RNU6-770P-201ENST00000363929 105 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 RNU6-654P-201ENST00000364373 107 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 RNU1-133P-201ENST00000364867 167 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 RNU6-326P-201ENST00000365480 107 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 Y_RNA.455-201ENST00000384230 98 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 Y_RNA.541-201ENST00000384640 113 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 RNA5SP496-201ENST00000391240 109 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 RNU6-613P-201ENST00000410412 108 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 AL035398.1-201ENST00000430869 322 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 U7.7-201ENST00000459276 60 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 MIR2115-201ENST00000516657 100 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 AL353765.1-201ENST00000605514 183 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
GGPS1O95749 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.84□□□□□ -2.27
GGPS1O95749 Y_RNA.214-201ENST00000364201 112 ntBASIC0.84□□□□□ -2.27
GGPS1O95749 SNORD113.3-201ENST00000364630 78 ntBASIC0.84□□□□□ -2.27
GGPS1O95749 RNU6-514P-201ENST00000384208 107 ntBASIC0.84□□□□□ -2.27
GGPS1O95749 AC006461.1-201ENST00000412637 326 ntBASIC0.84□□□□□ -2.27
GGPS1O95749 ELOCP20-201ENST00000422460 345 ntBASIC0.84□□□□□ -2.27
GGPS1O95749 AC005534.2-201ENST00000431047 433 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms