Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 Y_RNA.703-201ENST00000516846 111 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 MIR3646-201ENST00000578301 84 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 MIR4287-201ENST00000579398 78 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 DNAJC19P2-201ENST00000593340 302 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 AC021506.2-201ENST00000612354 169 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 AL773524.1-201ENST00000614065 229 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 snoU2-30.1-201ENST00000365012 70 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 SNORD24-201ENST00000383884 75 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 Y_RNA.393-201ENST00000383936 102 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 U8.16-201ENST00000391279 133 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 CALM2P4-201ENST00000430810 426 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 CYCTP-201ENST00000504253 315 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 RNA5SP168-201ENST00000516642 112 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 RNA5SP364-201ENST00000516938 78 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 MIR4709-201ENST00000577272 72 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS4BO75351 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS4BO75351 AC120024.3-201ENST00000603167 156 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 AL096840.1-201ENST00000603287 93 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 Y_RNA.778-201ENST00000620203 90 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 AL513423.1-201ENST00000621695 132 ntBASIC1.96□□□□□ -2.1
VPS4BO75351 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS4BO75351 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
VPS4BO75351 Y_RNA.8-201ENST00000362353 102 ntBASIC1.95□□□□□ -2.1
VPS4BO75351 RNA5SP276-201ENST00000362580 94 ntBASIC1.95□□□□□ -2.1
VPS4BO75351 RNU6-833P-201ENST00000363486 107 ntBASIC1.95□□□□□ -2.1
VPS4BO75351 SNORD116-18-201ENST00000383961 92 ntBASIC1.95□□□□□ -2.1
VPS4BO75351 Y_RNA.400-201ENST00000383963 111 ntBASIC1.95□□□□□ -2.1
VPS4BO75351 AL023284.1-201ENST00000403956 276 ntBASIC1.95□□□□□ -2.1
VPS4BO75351 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
VPS4BO75351 RNU2-70P-201ENST00000410718 179 ntBASIC1.95□□□□□ -2.1
VPS4BO75351 HMGN2P32-201ENST00000444648 269 ntBASIC1.95□□□□□ -2.1
VPS4BO75351 RNU6-365P-201ENST00000517113 106 ntBASIC1.95□□□□□ -2.1
VPS4BO75351 MIR3133-201ENST00000583157 78 ntBASIC1.95□□□□□ -2.1
VPS4BO75351 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS4BO75351 AL627230.6-201ENST00000611129 280 ntBASIC1.95□□□□□ -2.1
VPS4BO75351 RNU6-888P-201ENST00000363010 101 ntBASIC1.94□□□□□ -2.1
VPS4BO75351 RNU6-442P-201ENST00000383968 104 ntBASIC1.94□□□□□ -2.1
VPS4BO75351 RNU6-768P-201ENST00000384683 107 ntBASIC1.94□□□□□ -2.1
VPS4BO75351 MIR194-1-201ENST00000384892 85 ntBASIC1.94□□□□□ -2.1
VPS4BO75351 AC244636.1-201ENST00000421152 228 ntBASIC1.94□□□□□ -2.1
VPS4BO75351 AL445646.1-201ENST00000431784 216 ntBASIC1.94□□□□□ -2.1
VPS4BO75351 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS4BO75351 AC114811.1-201ENST00000507207 168 ntBASIC1.94□□□□□ -2.1
VPS4BO75351 SNORD116-25-201ENST00000516517 92 ntBASIC1.94□□□□□ -2.1
VPS4BO75351 RNU6-504P-201ENST00000516568 104 ntBASIC1.94□□□□□ -2.1
VPS4BO75351 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS4BO75351 MIR6845-201ENST00000613182 61 ntBASIC1.94□□□□□ -2.1
VPS4BO75351 RNU6-1084P-201ENST00000362498 107 ntBASIC1.93□□□□□ -2.1
VPS4BO75351 SNORD14E-201ENST00000364009 85 ntBASIC1.93□□□□□ -2.1
VPS4BO75351 RNU6-268P-201ENST00000364174 107 ntBASIC1.93□□□□□ -2.1
VPS4BO75351 SNORD50.2-201ENST00000365465 70 ntBASIC1.93□□□□□ -2.1
VPS4BO75351 MIR548A2-201ENST00000384956 97 ntBASIC1.93□□□□□ -2.1
VPS4BO75351 AL161935.2-201ENST00000414627 60 ntBASIC1.93□□□□□ -2.1
VPS4BO75351 RNU6-1116P-201ENST00000517269 99 ntBASIC1.93□□□□□ -2.1
VPS4BO75351 AC090142.3-201ENST00000519012 385 ntBASIC1.93□□□□□ -2.1
VPS4BO75351 AC007751.1-201ENST00000529260 376 ntBASIC1.93□□□□□ -2.1
VPS4BO75351 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS4BO75351 snoU13.31-201ENST00000607291 104 ntBASIC1.93□□□□□ -2.1
VPS4BO75351 MIR3658-201ENST00000636291 56 ntBASIC1.93□□□□□ -2.1
VPS4BO75351 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
VPS4BO75351 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS4BO75351 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
VPS4BO75351 MIR424-201ENST00000362227 98 ntBASIC1.92□□□□□ -2.1
VPS4BO75351 RNU6-818P-201ENST00000364837 108 ntBASIC1.92□□□□□ -2.1
VPS4BO75351 SNORD61-201ENST00000384252 73 ntBASIC1.92□□□□□ -2.1
VPS4BO75351 Y_RNA.508-201ENST00000384502 114 ntBASIC1.92□□□□□ -2.1
VPS4BO75351 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
VPS4BO75351 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
VPS4BO75351 RNA5SP182-201ENST00000516064 82 ntBASIC1.92□□□□□ -2.1
VPS4BO75351 AL365205.2-201ENST00000594586 68 ntBASIC1.92□□□□□ -2.1
VPS4BO75351 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
VPS4BO75351 MIR378A-201ENST00000362177 66 ntBASIC1.91□□□□□ -2.1
VPS4BO75351 RNU6-774P-201ENST00000363238 107 ntBASIC1.91□□□□□ -2.1
VPS4BO75351 Y_RNA.215-201ENST00000364204 112 ntBASIC1.91□□□□□ -2.1
VPS4BO75351 MIR660-201ENST00000385235 97 ntBASIC1.91□□□□□ -2.1
VPS4BO75351 SNRPGP13-201ENST00000442212 177 ntBASIC1.91□□□□□ -2.1
VPS4BO75351 PGBD4P5-201ENST00000445958 426 ntBASIC1.91□□□□□ -2.1
VPS4BO75351 RNU7-34P-201ENST00000459394 64 ntBASIC1.91□□□□□ -2.1
VPS4BO75351 Y_RNA.666-201ENST00000516187 112 ntBASIC1.91□□□□□ -2.1
VPS4BO75351 RNU6-830P-201ENST00000516353 107 ntBASIC1.91□□□□□ -2.1
VPS4BO75351 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
VPS4BO75351 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
VPS4BO75351 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VPS4BO75351 RNU6-661P-201ENST00000362409 107 ntBASIC1.9□□□□□ -2.11
VPS4BO75351 RNU6-151P-201ENST00000364158 107 ntBASIC1.9□□□□□ -2.11
VPS4BO75351 RNU6-163P-201ENST00000384396 106 ntBASIC1.9□□□□□ -2.11
VPS4BO75351 Y_RNA.521-201ENST00000384560 114 ntBASIC1.9□□□□□ -2.11
VPS4BO75351 MIR518F-201ENST00000384973 87 ntBASIC1.9□□□□□ -2.11
VPS4BO75351 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VPS4BO75351 SNORA40.18-201ENST00000391200 128 ntBASIC1.9□□□□□ -2.11
VPS4BO75351 SNORA75.5-201ENST00000391291 81 ntBASIC1.9□□□□□ -2.11
VPS4BO75351 MIR891A-201ENST00000401237 79 ntBASIC1.9□□□□□ -2.11
VPS4BO75351 RNA5SP489-201ENST00000410986 109 ntBASIC1.9□□□□□ -2.11
VPS4BO75351 CYCSP49-201ENST00000420810 319 ntBASIC1.9□□□□□ -2.11
VPS4BO75351 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.9□□□□□ -2.11
VPS4BO75351 RNU7-197P-201ENST00000458836 62 ntBASIC1.9□□□□□ -2.11
VPS4BO75351 RNU6-346P-201ENST00000516288 111 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms