Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RNU7-149P-201ENST00000516739 59 ntBASIC1.84□□□□□ -2.11
CTNND1O60716 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.84□□□□□ -2.11
CTNND1O60716 AC141273.2-201ENST00000618989 130 ntBASIC1.84□□□□□ -2.11
CTNND1O60716 snoU2_19.4-201ENST00000364329 80 ntBASIC1.83□□□□□ -2.12
CTNND1O60716 RNU4-17P-201ENST00000365598 141 ntBASIC1.83□□□□□ -2.12
CTNND1O60716 RNY3P5-201ENST00000384127 102 ntBASIC1.83□□□□□ -2.12
CTNND1O60716 MIR653-201ENST00000385279 96 ntBASIC1.83□□□□□ -2.12
CTNND1O60716 SNORD72-201ENST00000390994 80 ntBASIC1.83□□□□□ -2.12
CTNND1O60716 SNX2P2-201ENST00000424553 323 ntBASIC1.83□□□□□ -2.12
CTNND1O60716 AC245517.4-201ENST00000448601 281 ntBASIC1.83□□□□□ -2.12
CTNND1O60716 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.83□□□□□ -2.12
CTNND1O60716 AC090049.2-201ENST00000550377 109 ntBASIC1.83□□□□□ -2.12
CTNND1O60716 AL513534.2-201ENST00000603836 250 ntBASIC1.83□□□□□ -2.12
CTNND1O60716 AC009779.6-201ENST00000603972 165 ntBASIC1.83□□□□□ -2.12
CTNND1O60716 BX248123.2-201ENST00000606318 124 ntBASIC1.83□□□□□ -2.12
CTNND1O60716 AL365434.2-201ENST00000607979 234 ntBASIC1.83□□□□□ -2.12
CTNND1O60716 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CTNND1O60716 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CTNND1O60716 Y_RNA.200-201ENST00000364018 102 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 Y_RNA.308-201ENST00000365043 101 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 RNA5SP363-201ENST00000365072 115 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 RNU6-1138P-201ENST00000365359 106 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 Y_RNA.552-201ENST00000384665 112 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 RNU6-381P-201ENST00000391259 108 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 AC015922.2-201ENST00000435593 184 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 AC092991.1-201ENST00000477176 376 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 SCARNA8-201ENST00000515924 131 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 RN7SKP164-201ENST00000516138 266 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 SNORD77.4-201ENST00000516158 81 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 RNY3P16-201ENST00000516338 101 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 Pinc.1-201ENST00000616452 154 ntBASIC1.82□□□□□ -2.12
CTNND1O60716 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CTNND1O60716 Y_RNA.327-201ENST00000365201 102 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 RNU6-1065P-201ENST00000384513 106 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 Y_RNA.515-201ENST00000384535 112 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 MIR499A-201ENST00000384903 122 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 RNU6-1228P-201ENST00000391014 107 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 AC245047.8-201ENST00000456455 284 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 RNA5SP445-201ENST00000515889 115 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 RNU6-322P-201ENST00000516010 103 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 RNU6-917P-201ENST00000516294 104 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 RNU6-453P-201ENST00000516819 85 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 RNU6-388P-201ENST00000517012 105 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 RNU6-389P-201ENST00000517048 105 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 SNORA31.24-201ENST00000517232 57 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 AC019176.1-201ENST00000518519 225 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 MIR4662B-201ENST00000579498 81 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 MIR3937-201ENST00000580135 106 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 MIR4285-201ENST00000581001 85 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 AL391903.3-201ENST00000612158 163 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.81□□□□□ -2.12
CTNND1O60716 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CTNND1O60716 Y_RNA.83-201ENST00000363005 113 ntBASIC1.8□□□□□ -2.12
CTNND1O60716 SNORA7.1-201ENST00000363750 139 ntBASIC1.8□□□□□ -2.12
CTNND1O60716 RNU6-392P-201ENST00000364926 101 ntBASIC1.8□□□□□ -2.12
CTNND1O60716 MIR526A1-201ENST00000384897 85 ntBASIC1.8□□□□□ -2.12
CTNND1O60716 MT-TT-201ENST00000387460 66 ntBASIC1.8□□□□□ -2.12
CTNND1O60716 MIR1323-201ENST00000408090 73 ntBASIC1.8□□□□□ -2.12
CTNND1O60716 RNU2-55P-201ENST00000411146 174 ntBASIC1.8□□□□□ -2.12
CTNND1O60716 SNRPGP14-201ENST00000435400 219 ntBASIC1.8□□□□□ -2.12
CTNND1O60716 RNU6-126P-201ENST00000516685 103 ntBASIC1.8□□□□□ -2.12
CTNND1O60716 FAM106DP-201ENST00000586416 501 ntBASIC1.8□□□□□ -2.12
CTNND1O60716 AC078938.1-201ENST00000620993 318 ntBASIC1.8□□□□□ -2.12
CTNND1O60716 ZNF209P-201ENST00000593450 2304 ntBASIC1.8□□□□□ -2.12
CTNND1O60716 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CTNND1O60716 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CTNND1O60716 RNU6-103P-201ENST00000363686 107 ntBASIC1.79□□□□□ -2.12
CTNND1O60716 RNU6-268P-201ENST00000364174 107 ntBASIC1.79□□□□□ -2.12
CTNND1O60716 SNORA25.9-201ENST00000365087 128 ntBASIC1.79□□□□□ -2.12
CTNND1O60716 SNORD38C-201ENST00000384381 69 ntBASIC1.79□□□□□ -2.12
CTNND1O60716 MIR136-201ENST00000385207 82 ntBASIC1.79□□□□□ -2.12
CTNND1O60716 RNU6-493P-201ENST00000391321 108 ntBASIC1.79□□□□□ -2.12
CTNND1O60716 AL606845.1-201ENST00000404881 255 ntBASIC1.79□□□□□ -2.12
CTNND1O60716 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.79□□□□□ -2.12
CTNND1O60716 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.79□□□□□ -2.12
CTNND1O60716 RNU6-902P-201ENST00000517212 91 ntBASIC1.79□□□□□ -2.12
CTNND1O60716 AC090142.3-201ENST00000519012 385 ntBASIC1.79□□□□□ -2.12
CTNND1O60716 AC006441.5-201ENST00000612680 209 ntBASIC1.79□□□□□ -2.12
CTNND1O60716 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.78□□□□□ -2.12
CTNND1O60716 RNU6-923P-201ENST00000364753 107 ntBASIC1.78□□□□□ -2.12
CTNND1O60716 AL451046.2-201ENST00000403074 277 ntBASIC1.78□□□□□ -2.12
CTNND1O60716 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CTNND1O60716 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.78□□□□□ -2.12
CTNND1O60716 MIR4421-201ENST00000578133 69 ntBASIC1.78□□□□□ -2.12
CTNND1O60716 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
CTNND1O60716 Y_RNA.7-201ENST00000362352 102 ntBASIC1.77□□□□□ -2.13
CTNND1O60716 MIR516B2-201ENST00000385190 85 ntBASIC1.77□□□□□ -2.13
CTNND1O60716 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.77□□□□□ -2.13
CTNND1O60716 SNRPGP8-201ENST00000454064 226 ntBASIC1.77□□□□□ -2.13
CTNND1O60716 RNU6-1299P-201ENST00000516316 100 ntBASIC1.77□□□□□ -2.13
CTNND1O60716 AC130289.1-201ENST00000577321 73 ntBASIC1.77□□□□□ -2.13
CTNND1O60716 AL442644.1-201ENST00000454390 3105 ntBASIC1.77□□□□□ -2.13
CTNND1O60716 MIR411-201ENST00000362239 96 ntBASIC1.76□□□□□ -2.13
CTNND1O60716 Y_RNA.486-201ENST00000384398 107 ntBASIC1.76□□□□□ -2.13
CTNND1O60716 RNU6-830P-201ENST00000516353 107 ntBASIC1.76□□□□□ -2.13
CTNND1O60716 RNU6-922P-201ENST00000516753 99 ntBASIC1.76□□□□□ -2.13
CTNND1O60716 RNU1-92P-201ENST00000517017 135 ntBASIC1.76□□□□□ -2.13
CTNND1O60716 MIR4308-201ENST00000580634 81 ntBASIC1.76□□□□□ -2.13
CTNND1O60716 MIR4744-201ENST00000581563 82 ntBASIC1.76□□□□□ -2.13
CTNND1O60716 Z83818.1-201ENST00000603584 150 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms