Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.02□□□□□ -2.25
SNX3O60493 AC002429.1-201ENST00000437672 148 ntBASIC1.02□□□□□ -2.25
SNX3O60493 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.02□□□□□ -2.25
SNX3O60493 MTCO2P24-201ENST00000515611 426 ntBASIC1.02□□□□□ -2.25
SNX3O60493 AP003716.2-201ENST00000528260 108 ntBASIC1.02□□□□□ -2.25
SNX3O60493 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.02□□□□□ -2.25
SNX3O60493 AC006006.1-201ENST00000603082 144 ntBASIC1.02□□□□□ -2.25
SNX3O60493 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
SNX3O60493 U2.14-201ENST00000615943 113 ntBASIC1.02□□□□□ -2.25
SNX3O60493 AC008163.1-202ENST00000636004 2889 ntBASIC1.01□□□□□ -2.25
SNX3O60493 Y_RNA.24-201ENST00000362508 103 ntBASIC1.01□□□□□ -2.25
SNX3O60493 MIR570-201ENST00000384917 97 ntBASIC1.01□□□□□ -2.25
SNX3O60493 RNU4-62P-201ENST00000410125 130 ntBASIC1.01□□□□□ -2.25
SNX3O60493 RNU7-21P-201ENST00000459430 62 ntBASIC1.01□□□□□ -2.25
SNX3O60493 RPS23P4-201ENST00000487908 423 ntBASIC1.01□□□□□ -2.25
SNX3O60493 AC108210.2-201ENST00000503681 201 ntBASIC1.01□□□□□ -2.25
SNX3O60493 RNU7-181P-201ENST00000517234 74 ntBASIC1.01□□□□□ -2.25
SNX3O60493 AC015712.3-201ENST00000559380 164 ntBASIC1.01□□□□□ -2.25
SNX3O60493 AL360085.1-201ENST00000604713 532 ntBASIC1.01□□□□□ -2.25
SNX3O60493 AC008133.2-201ENST00000624540 351 ntBASIC1.01□□□□□ -2.25
SNX3O60493 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
SNX3O60493 MIR103A2-201ENST00000362154 78 ntBASIC1□□□□□ -2.25
SNX3O60493 Y_RNA.47-201ENST00000362697 108 ntBASIC1□□□□□ -2.25
SNX3O60493 RNU6-1138P-201ENST00000365359 106 ntBASIC1□□□□□ -2.25
SNX3O60493 Y_RNA.396-201ENST00000383949 103 ntBASIC1□□□□□ -2.25
SNX3O60493 SNORA8.3-201ENST00000384679 139 ntBASIC1□□□□□ -2.25
SNX3O60493 MIR19B1-201ENST00000384829 87 ntBASIC1□□□□□ -2.25
SNX3O60493 Y_RNA.587-201ENST00000391210 103 ntBASIC1□□□□□ -2.25
SNX3O60493 5S_rRNA.2-201ENST00000391293 112 ntBASIC1□□□□□ -2.25
SNX3O60493 SNORA11.2-201ENST00000408318 127 ntBASIC1□□□□□ -2.25
SNX3O60493 MIR1185-1-201ENST00000408598 86 ntBASIC1□□□□□ -2.25
SNX3O60493 AL358176.2-201ENST00000425769 204 ntBASIC1□□□□□ -2.25
SNX3O60493 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1□□□□□ -2.25
SNX3O60493 RNU4-57P-201ENST00000515980 135 ntBASIC1□□□□□ -2.25
SNX3O60493 SNORD77.4-201ENST00000516158 81 ntBASIC1□□□□□ -2.25
SNX3O60493 DNAJC19P9-201ENST00000555084 351 ntBASIC1□□□□□ -2.25
SNX3O60493 U6.104-201ENST00000637979 90 ntBASIC1□□□□□ -2.25
SNX3O60493 Y_RNA.82-201ENST00000363000 102 ntBASIC0.99□□□□□ -2.25
SNX3O60493 Y_RNA.92-201ENST00000363043 102 ntBASIC0.99□□□□□ -2.25
SNX3O60493 RNA5SP48-201ENST00000363969 126 ntBASIC0.99□□□□□ -2.25
SNX3O60493 Y_RNA.235-201ENST00000364412 102 ntBASIC0.99□□□□□ -2.25
SNX3O60493 Y_RNA.306-201ENST00000365015 102 ntBASIC0.99□□□□□ -2.25
SNX3O60493 Y_RNA.312-201ENST00000365089 102 ntBASIC0.99□□□□□ -2.25
SNX3O60493 Y_RNA.322-201ENST00000365151 102 ntBASIC0.99□□□□□ -2.25
SNX3O60493 Y_RNA.518-201ENST00000384552 113 ntBASIC0.99□□□□□ -2.25
SNX3O60493 MIR626-201ENST00000385032 94 ntBASIC0.99□□□□□ -2.25
SNX3O60493 MIR548O-201ENST00000408583 114 ntBASIC0.99□□□□□ -2.25
SNX3O60493 AC009474.2-201ENST00000451383 136 ntBASIC0.99□□□□□ -2.25
SNX3O60493 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.99□□□□□ -2.25
SNX3O60493 SNORD2.1-201ENST00000458762 69 ntBASIC0.99□□□□□ -2.25
SNX3O60493 Y_RNA.650-201ENST00000459002 102 ntBASIC0.99□□□□□ -2.25
SNX3O60493 RNU7-95P-201ENST00000459222 64 ntBASIC0.99□□□□□ -2.25
SNX3O60493 OR2A41P-201ENST00000473586 105 ntBASIC0.99□□□□□ -2.25
SNX3O60493 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.99□□□□□ -2.25
SNX3O60493 Y_RNA.666-201ENST00000516187 112 ntBASIC0.99□□□□□ -2.25
SNX3O60493 RNU7-25P-201ENST00000516544 62 ntBASIC0.99□□□□□ -2.25
SNX3O60493 Y_RNA.777-201ENST00000516982 102 ntBASIC0.99□□□□□ -2.25
SNX3O60493 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.99□□□□□ -2.25
SNX3O60493 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.99□□□□□ -2.25
SNX3O60493 MIR5688-201ENST00000580619 83 ntBASIC0.99□□□□□ -2.25
SNX3O60493 Y_RNA.771-201ENST00000598668 102 ntBASIC0.99□□□□□ -2.25
SNX3O60493 Y_RNA.789-201ENST00000622480 102 ntBASIC0.99□□□□□ -2.25
SNX3O60493 MIR4251-201ENST00000635819 61 ntBASIC0.99□□□□□ -2.25
SNX3O60493 RNU6-1309P-201ENST00000363305 108 ntBASIC0.98□□□□□ -2.25
SNX3O60493 SNORA7.1-201ENST00000363750 139 ntBASIC0.98□□□□□ -2.25
SNX3O60493 Y_RNA.229-201ENST00000364347 113 ntBASIC0.98□□□□□ -2.25
SNX3O60493 SNORA70.7-201ENST00000384159 133 ntBASIC0.98□□□□□ -2.25
SNX3O60493 Y_RNA.486-201ENST00000384398 107 ntBASIC0.98□□□□□ -2.25
SNX3O60493 Y_RNA.547-201ENST00000384654 119 ntBASIC0.98□□□□□ -2.25
SNX3O60493 RNU6-327P-201ENST00000516270 127 ntBASIC0.98□□□□□ -2.25
SNX3O60493 AC100767.1-201ENST00000528178 123 ntBASIC0.98□□□□□ -2.25
SNX3O60493 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.98□□□□□ -2.25
SNX3O60493 AL353997.5-201ENST00000618886 171 ntBASIC0.98□□□□□ -2.25
SNX3O60493 Y_RNA.149-201ENST00000363558 117 ntBASIC0.97□□□□□ -2.25
SNX3O60493 Y_RNA.330-201ENST00000365230 109 ntBASIC0.97□□□□□ -2.25
SNX3O60493 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.97□□□□□ -2.25
SNX3O60493 Y_RNA.590-201ENST00000410140 107 ntBASIC0.97□□□□□ -2.25
SNX3O60493 RNU7-90P-201ENST00000459216 62 ntBASIC0.97□□□□□ -2.25
SNX3O60493 SNORD124-201ENST00000459577 104 ntBASIC0.97□□□□□ -2.25
SNX3O60493 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.97□□□□□ -2.25
SNX3O60493 SCARNA15.1-201ENST00000516384 125 ntBASIC0.97□□□□□ -2.25
SNX3O60493 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
SNX3O60493 AC012433.1-201ENST00000588916 398 ntBASIC0.97□□□□□ -2.25
SNX3O60493 Y_RNA.122-201ENST00000363331 96 ntBASIC0.96□□□□□ -2.26
SNX3O60493 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
SNX3O60493 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
SNX3O60493 Y_RNA.370-201ENST00000365589 108 ntBASIC0.96□□□□□ -2.26
SNX3O60493 MIR1302-7-201ENST00000408841 72 ntBASIC0.96□□□□□ -2.26
SNX3O60493 MTND2P23-201ENST00000422990 651 ntBASIC0.96□□□□□ -2.26
SNX3O60493 AC108667.1-201ENST00000428618 249 ntBASIC0.96□□□□□ -2.26
SNX3O60493 COX6CP14-201ENST00000469580 174 ntBASIC0.96□□□□□ -2.26
SNX3O60493 Y_RNA.679-201ENST00000516416 91 ntBASIC0.96□□□□□ -2.26
SNX3O60493 AC007751.1-201ENST00000529260 376 ntBASIC0.96□□□□□ -2.26
SNX3O60493 MIR4643-201ENST00000577473 78 ntBASIC0.96□□□□□ -2.26
SNX3O60493 MIR4282-201ENST00000583613 67 ntBASIC0.96□□□□□ -2.26
SNX3O60493 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.96□□□□□ -2.26
SNX3O60493 SEPT14P17-201ENST00000617978 177 ntBASIC0.96□□□□□ -2.26
SNX3O60493 AL353770.2-201ENST00000620024 78 ntBASIC0.96□□□□□ -2.26
SNX3O60493 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SNX3O60493 SNORA1.2-201ENST00000365189 134 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms