Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC245047.8-201ENST00000456455 284 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 Y_RNA.637-201ENST00000459424 114 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 AC048334.1-201ENST00000477975 159 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 AC098869.1-201ENST00000481627 292 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAF3IP2O43734 SERF1AP1-201ENST00000514575 187 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 RNU7-40P-201ENST00000516397 64 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 SNORA27.4-201ENST00000516650 95 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 RNA5SP404-201ENST00000517118 132 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.8□□□□□ -2.28
TRAF3IP2O43734 AL021707.8-201ENST00000609428 183 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.8□□□□□ -2.28
TRAF3IP2O43734 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
TRAF3IP2O43734 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TRAF3IP2O43734 Y_RNA.26-201ENST00000362539 101 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 Y_RNA.64-201ENST00000362845 102 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 RNA5SP48-201ENST00000363969 126 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 Y_RNA.326-201ENST00000365176 113 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 MIR215-201ENST00000384858 110 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 MIR802-201ENST00000390235 94 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 RNU6-1109P-201ENST00000391187 107 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 RNA5SP496-201ENST00000391240 109 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 SNORD79.1-201ENST00000516069 84 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 RNU6-1338P-201ENST00000516328 91 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 RNU6-1153P-201ENST00000516760 105 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 AP003072.1-201ENST00000531740 145 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 RPL23AP91-201ENST00000569211 455 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 MIR5692C2-201ENST00000577959 77 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 AC006504.6-201ENST00000590142 199 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 PRELID3BP2-201ENST00000605362 201 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 AC211469.2-201ENST00000605461 205 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 AC006441.5-201ENST00000612680 209 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 AL391516.1-201ENST00000554380 2449 ntBASIC0.79□□□□□ -2.28
TRAF3IP2O43734 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TRAF3IP2O43734 SNORA63-201ENST00000363450 132 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 SNORA80D-201ENST00000384488 135 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 RNU6-1160P-201ENST00000384546 104 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 Y_RNA.518-201ENST00000384552 113 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 MIR526A2-201ENST00000390198 65 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 RNU6-910P-201ENST00000390844 107 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 RNU6-1203P-201ENST00000410703 110 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 BTF3P11-201ENST00000426582 477 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAF3IP2O43734 AC023449.1-201ENST00000454464 154 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 SNORD123-201ENST00000459473 70 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAF3IP2O43734 RNU6-947P-201ENST00000516264 106 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 MIR4764-201ENST00000580680 88 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 FAM71BP1-201ENST00000604431 523 ntBASIC0.78□□□□□ -2.28
TRAF3IP2O43734 AC134026.1-201ENST00000623249 2239 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
TRAF3IP2O43734 MIR367-201ENST00000362299 68 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 RNU6-268P-201ENST00000364174 107 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 RNU6-1138P-201ENST00000365359 106 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 Y_RNA.363-201ENST00000365529 113 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 Y_RNA.370-201ENST00000365589 108 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 RNU6-713P-201ENST00000384761 107 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 MIR520C-201ENST00000385005 87 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 RNA5SP480-201ENST00000516840 109 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 Y_RNA.720-201ENST00000517166 92 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 AP003716.2-201ENST00000528260 108 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAF3IP2O43734 MIR4724-201ENST00000579485 89 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 MIR3192-201ENST00000584920 77 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 Y_RNA.812-201ENST00000610788 101 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 Y_RNA.784-201ENST00000613803 101 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 Y_RNA.787-201ENST00000616522 101 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 Y_RNA.780-201ENST00000617336 101 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 Y_RNA.801-201ENST00000619005 101 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 AC012676.2-201ENST00000619258 186 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 PVT1_3.1-201ENST00000620853 95 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 AC022140.2-201ENST00000623500 188 ntBASIC0.77□□□□□ -2.29
TRAF3IP2O43734 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAF3IP2O43734 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TRAF3IP2O43734 MIR335-201ENST00000362173 94 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 Y_RNA.14-201ENST00000362415 103 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 Y_RNA.16-201ENST00000362421 102 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 Y_RNA.275-201ENST00000364726 110 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 MIR598-201ENST00000384868 97 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 MIR7-2-201ENST00000384970 110 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 AL603910.2-201ENST00000407268 136 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 MIR548F4-201ENST00000408515 105 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 AC063976.4-201ENST00000421971 163 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAF3IP2O43734 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAF3IP2O43734 snoU13.25-201ENST00000458945 104 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 UBL5P1-201ENST00000507979 193 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 RNU6-126P-201ENST00000516685 103 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 SNORA18.7-201ENST00000516910 131 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAF3IP2O43734 MIR3973-201ENST00000579824 107 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 AL008718.3-201ENST00000610217 321 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 AP001282.2-201ENST00000616149 309 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 Pinc.1-201ENST00000616452 154 ntBASIC0.76□□□□□ -2.29
TRAF3IP2O43734 RNA5SP264-201ENST00000363115 107 ntBASIC0.75□□□□□ -2.29
TRAF3IP2O43734 SNORD114-26-201ENST00000363543 72 ntBASIC0.75□□□□□ -2.29
TRAF3IP2O43734 RNU6-662P-201ENST00000384253 104 ntBASIC0.75□□□□□ -2.29
TRAF3IP2O43734 RNU6-342P-201ENST00000384521 104 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms