Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL160236.1-201ENST00000556317 195 ntBASIC1.65□□□□□ -2.15
LDB2O43679 MIR4431-201ENST00000579990 94 ntBASIC1.65□□□□□ -2.15
LDB2O43679 MIR3683-201ENST00000580847 82 ntBASIC1.65□□□□□ -2.15
LDB2O43679 AC120024.3-201ENST00000603167 156 ntBASIC1.65□□□□□ -2.15
LDB2O43679 MIR502-201ENST00000606349 86 ntBASIC1.65□□□□□ -2.15
LDB2O43679 AC027279.3-201ENST00000625055 122 ntBASIC1.65□□□□□ -2.15
LDB2O43679 RNU6-1084P-201ENST00000362498 107 ntBASIC1.64□□□□□ -2.15
LDB2O43679 SNORD50B-201ENST00000364995 70 ntBASIC1.64□□□□□ -2.15
LDB2O43679 RNU6-484P-201ENST00000384016 107 ntBASIC1.64□□□□□ -2.15
LDB2O43679 Y_RNA.441-201ENST00000384123 112 ntBASIC1.64□□□□□ -2.15
LDB2O43679 SNORD72-201ENST00000390994 80 ntBASIC1.64□□□□□ -2.15
LDB2O43679 U8.16-201ENST00000391279 133 ntBASIC1.64□□□□□ -2.15
LDB2O43679 SNORA79-201ENST00000408376 140 ntBASIC1.64□□□□□ -2.15
LDB2O43679 SEPT7P4-201ENST00000437076 306 ntBASIC1.64□□□□□ -2.15
LDB2O43679 HMGN2P32-201ENST00000444648 269 ntBASIC1.64□□□□□ -2.15
LDB2O43679 RNA5SP153-201ENST00000516498 76 ntBASIC1.64□□□□□ -2.15
LDB2O43679 SNORD45.4-201ENST00000516629 73 ntBASIC1.64□□□□□ -2.15
LDB2O43679 RNA5SP168-201ENST00000516642 112 ntBASIC1.64□□□□□ -2.15
LDB2O43679 MIR4713-201ENST00000582691 75 ntBASIC1.64□□□□□ -2.15
LDB2O43679 Pinc.1-201ENST00000616452 154 ntBASIC1.64□□□□□ -2.15
LDB2O43679 AL513423.1-201ENST00000621695 132 ntBASIC1.64□□□□□ -2.15
LDB2O43679 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
LDB2O43679 RNU6-661P-201ENST00000362409 107 ntBASIC1.63□□□□□ -2.15
LDB2O43679 RNU6-457P-201ENST00000363999 107 ntBASIC1.63□□□□□ -2.15
LDB2O43679 SNORD14E-201ENST00000364009 85 ntBASIC1.63□□□□□ -2.15
LDB2O43679 Y_RNA.357-201ENST00000365487 109 ntBASIC1.63□□□□□ -2.15
LDB2O43679 RNU6-643P-201ENST00000384018 107 ntBASIC1.63□□□□□ -2.15
LDB2O43679 Y_RNA.464-201ENST00000384282 110 ntBASIC1.63□□□□□ -2.15
LDB2O43679 RNU6-163P-201ENST00000384396 106 ntBASIC1.63□□□□□ -2.15
LDB2O43679 MIR802-201ENST00000390235 94 ntBASIC1.63□□□□□ -2.15
LDB2O43679 SNORA17.3-201ENST00000391159 129 ntBASIC1.63□□□□□ -2.15
LDB2O43679 SNORA26-201ENST00000391286 122 ntBASIC1.63□□□□□ -2.15
LDB2O43679 RNU5E-9P-201ENST00000411164 104 ntBASIC1.63□□□□□ -2.15
LDB2O43679 RNU6-197P-201ENST00000516680 100 ntBASIC1.63□□□□□ -2.15
LDB2O43679 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.63□□□□□ -2.15
LDB2O43679 AC097639.2-201ENST00000603159 172 ntBASIC1.63□□□□□ -2.15
LDB2O43679 Y_RNA.336-201ENST00000365307 109 ntBASIC1.62□□□□□ -2.15
LDB2O43679 RNU6-442P-201ENST00000383968 104 ntBASIC1.62□□□□□ -2.15
LDB2O43679 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
LDB2O43679 RNU2-70P-201ENST00000410718 179 ntBASIC1.62□□□□□ -2.15
LDB2O43679 RNU6-1135P-201ENST00000411083 103 ntBASIC1.62□□□□□ -2.15
LDB2O43679 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
LDB2O43679 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.62□□□□□ -2.15
LDB2O43679 PGBD4P5-201ENST00000445958 426 ntBASIC1.62□□□□□ -2.15
LDB2O43679 AC114811.1-201ENST00000507207 168 ntBASIC1.62□□□□□ -2.15
LDB2O43679 AC107027.2-201ENST00000512197 115 ntBASIC1.62□□□□□ -2.15
LDB2O43679 MIR3122-201ENST00000577243 73 ntBASIC1.62□□□□□ -2.15
LDB2O43679 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LDB2O43679 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LDB2O43679 MIR424-201ENST00000362227 98 ntBASIC1.61□□□□□ -2.15
LDB2O43679 RNU6-833P-201ENST00000363486 107 ntBASIC1.61□□□□□ -2.15
LDB2O43679 RNU6-414P-201ENST00000363705 104 ntBASIC1.61□□□□□ -2.15
LDB2O43679 RNU4-84P-201ENST00000364200 139 ntBASIC1.61□□□□□ -2.15
LDB2O43679 Y_RNA.634-201ENST00000364811 113 ntBASIC1.61□□□□□ -2.15
LDB2O43679 MIR660-201ENST00000385235 97 ntBASIC1.61□□□□□ -2.15
LDB2O43679 RNU6-1212P-201ENST00000517023 104 ntBASIC1.61□□□□□ -2.15
LDB2O43679 RNU6-1116P-201ENST00000517269 99 ntBASIC1.61□□□□□ -2.15
LDB2O43679 RNU6-1123P-201ENST00000362347 106 ntBASIC1.6□□□□□ -2.15
LDB2O43679 Y_RNA.272-201ENST00000364696 102 ntBASIC1.6□□□□□ -2.15
LDB2O43679 RNU6-203P-201ENST00000384038 104 ntBASIC1.6□□□□□ -2.15
LDB2O43679 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
LDB2O43679 Y_RNA.486-201ENST00000384398 107 ntBASIC1.6□□□□□ -2.15
LDB2O43679 RNU6-239P-201ENST00000390990 99 ntBASIC1.6□□□□□ -2.15
LDB2O43679 MIR891A-201ENST00000401237 79 ntBASIC1.6□□□□□ -2.15
LDB2O43679 RNU6-394P-201ENST00000410735 107 ntBASIC1.6□□□□□ -2.15
LDB2O43679 AC006461.1-201ENST00000412637 326 ntBASIC1.6□□□□□ -2.15
LDB2O43679 RNU7-12P-201ENST00000516030 62 ntBASIC1.6□□□□□ -2.15
LDB2O43679 RNU6-365P-201ENST00000517113 106 ntBASIC1.6□□□□□ -2.15
LDB2O43679 SNORD3E-202ENST00000627253 216 ntBASIC1.6□□□□□ -2.15
LDB2O43679 MIR378A-201ENST00000362177 66 ntBASIC1.59□□□□□ -2.15
LDB2O43679 Y_RNA.91-201ENST00000363042 107 ntBASIC1.59□□□□□ -2.15
LDB2O43679 RNU6-1062P-201ENST00000383908 107 ntBASIC1.59□□□□□ -2.15
LDB2O43679 MIR194-1-201ENST00000384892 85 ntBASIC1.59□□□□□ -2.15
LDB2O43679 SNRPGP14-201ENST00000435400 219 ntBASIC1.59□□□□□ -2.15
LDB2O43679 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.59□□□□□ -2.15
LDB2O43679 JTBP1-201ENST00000441314 247 ntBASIC1.59□□□□□ -2.15
LDB2O43679 AC108729.3-201ENST00000513484 108 ntBASIC1.59□□□□□ -2.15
LDB2O43679 AC006441.5-201ENST00000612680 209 ntBASIC1.59□□□□□ -2.15
LDB2O43679 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
LDB2O43679 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
LDB2O43679 SNORD24-201ENST00000383884 75 ntBASIC1.58□□□□□ -2.16
LDB2O43679 AL161935.2-201ENST00000414627 60 ntBASIC1.58□□□□□ -2.16
LDB2O43679 RNU6-504P-201ENST00000516568 104 ntBASIC1.58□□□□□ -2.16
LDB2O43679 RNU7-121P-201ENST00000516604 62 ntBASIC1.58□□□□□ -2.16
LDB2O43679 MIR378D2-201ENST00000580636 98 ntBASIC1.58□□□□□ -2.16
LDB2O43679 AC104465.1-201ENST00000611365 139 ntBASIC1.58□□□□□ -2.16
LDB2O43679 Y_RNA.66-201ENST00000362862 102 ntBASIC1.57□□□□□ -2.16
LDB2O43679 RNU6-268P-201ENST00000364174 107 ntBASIC1.57□□□□□ -2.16
LDB2O43679 Y_RNA.337-201ENST00000365312 102 ntBASIC1.57□□□□□ -2.16
LDB2O43679 MIR1267-201ENST00000408723 78 ntBASIC1.57□□□□□ -2.16
LDB2O43679 AC004965.1-201ENST00000413033 213 ntBASIC1.57□□□□□ -2.16
LDB2O43679 SNORD116-25-201ENST00000516517 92 ntBASIC1.57□□□□□ -2.16
LDB2O43679 MIR3144-201ENST00000579460 79 ntBASIC1.57□□□□□ -2.16
LDB2O43679 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
LDB2O43679 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
LDB2O43679 MIR8074-201ENST00000615081 81 ntBASIC1.57□□□□□ -2.16
LDB2O43679 AL442644.1-201ENST00000454390 3105 ntBASIC1.57□□□□□ -2.16
LDB2O43679 RNU6-978P-201ENST00000364371 103 ntBASIC1.56□□□□□ -2.16
LDB2O43679 RNU6-804P-201ENST00000384286 107 ntBASIC1.56□□□□□ -2.16
LDB2O43679 MIR452-201ENST00000385020 85 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms