Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNU2-70P-201ENST00000410718 179 ntBASIC1.8□□□□□ -2.12
PHGDHO43175 RNU6-1135P-201ENST00000411083 103 ntBASIC1.8□□□□□ -2.12
PHGDHO43175 AC015922.2-201ENST00000435593 184 ntBASIC1.8□□□□□ -2.12
PHGDHO43175 RPS29P11-201ENST00000496507 171 ntBASIC1.8□□□□□ -2.12
PHGDHO43175 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.8□□□□□ -2.12
PHGDHO43175 WWP1P1-201ENST00000466609 2769 ntBASIC1.8□□□□□ -2.12
PHGDHO43175 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PHGDHO43175 Y_RNA.23-201ENST00000362496 106 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 SNORD114-1-201ENST00000362705 72 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 Y_RNA.180-201ENST00000363867 113 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 RNU6-268P-201ENST00000364174 107 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 RNU6-312P-201ENST00000364629 107 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 MIR526A1-201ENST00000384897 85 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 SNORA26-201ENST00000391286 122 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 SNORA79-201ENST00000408376 140 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 AC006461.1-201ENST00000412637 326 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 AL445685.2-201ENST00000422551 342 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 SNRPGP14-201ENST00000435400 219 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 AC092991.1-201ENST00000477176 376 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 AC079140.2-201ENST00000506193 142 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 RNU6-365P-201ENST00000517113 106 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 AC019176.1-201ENST00000518519 225 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 AC090142.3-201ENST00000519012 385 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 MIR4298-201ENST00000584380 73 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 FAM106DP-201ENST00000586416 501 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 AL365434.2-201ENST00000607979 234 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 AC006441.5-201ENST00000612680 209 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.79□□□□□ -2.12
PHGDHO43175 MIR302D-201ENST00000362275 68 ntBASIC1.78□□□□□ -2.12
PHGDHO43175 Y_RNA.634-201ENST00000364811 113 ntBASIC1.78□□□□□ -2.12
PHGDHO43175 SNORA2.2-201ENST00000365473 135 ntBASIC1.78□□□□□ -2.12
PHGDHO43175 RNU6-804P-201ENST00000384286 107 ntBASIC1.78□□□□□ -2.12
PHGDHO43175 Y_RNA.666-201ENST00000516187 112 ntBASIC1.78□□□□□ -2.12
PHGDHO43175 RNU6-917P-201ENST00000516294 104 ntBASIC1.78□□□□□ -2.12
PHGDHO43175 MIR4431-201ENST00000579990 94 ntBASIC1.78□□□□□ -2.12
PHGDHO43175 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.78□□□□□ -2.12
PHGDHO43175 Y_RNA.8-201ENST00000362353 102 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 SNORD33-201ENST00000362761 85 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 RNU6-818P-201ENST00000364837 108 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 Y_RNA.441-201ENST00000384123 112 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 MIR9-3-201ENST00000385084 90 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 MIR136-201ENST00000385207 82 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 MIR934-201ENST00000401241 83 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 MIR1261-201ENST00000408659 82 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 snoU13.26-201ENST00000459452 105 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 RNU6-322P-201ENST00000516010 103 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 RNA5SP153-201ENST00000516498 76 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 AC024614.2-201ENST00000577584 372 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 MIR3937-201ENST00000580135 106 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 AC015726.2-201ENST00000620112 122 ntBASIC1.77□□□□□ -2.13
PHGDHO43175 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PHGDHO43175 RNU4-43P-201ENST00000410628 137 ntBASIC1.76□□□□□ -2.13
PHGDHO43175 RNU6-394P-201ENST00000410735 107 ntBASIC1.76□□□□□ -2.13
PHGDHO43175 CYCSP49-201ENST00000420810 319 ntBASIC1.76□□□□□ -2.13
PHGDHO43175 snoU13.15-201ENST00000459407 104 ntBASIC1.76□□□□□ -2.13
PHGDHO43175 RNU6-197P-201ENST00000516680 100 ntBASIC1.76□□□□□ -2.13
PHGDHO43175 RNU6-255P-201ENST00000516957 105 ntBASIC1.76□□□□□ -2.13
PHGDHO43175 AC090049.2-201ENST00000550377 109 ntBASIC1.76□□□□□ -2.13
PHGDHO43175 AC021753.1-201ENST00000635724 168 ntBASIC1.76□□□□□ -2.13
PHGDHO43175 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
PHGDHO43175 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
PHGDHO43175 RNU4-84P-201ENST00000364200 139 ntBASIC1.75□□□□□ -2.13
PHGDHO43175 RNU6-1130P-201ENST00000365434 107 ntBASIC1.75□□□□□ -2.13
PHGDHO43175 Y_RNA.357-201ENST00000365487 109 ntBASIC1.75□□□□□ -2.13
PHGDHO43175 RNU6-643P-201ENST00000384018 107 ntBASIC1.75□□□□□ -2.13
PHGDHO43175 SNORD61-201ENST00000384252 73 ntBASIC1.75□□□□□ -2.13
PHGDHO43175 MIR653-201ENST00000385279 96 ntBASIC1.75□□□□□ -2.13
PHGDHO43175 AL451046.2-201ENST00000403074 277 ntBASIC1.75□□□□□ -2.13
PHGDHO43175 MIR548O-201ENST00000408583 114 ntBASIC1.75□□□□□ -2.13
PHGDHO43175 SNX2P2-201ENST00000424553 323 ntBASIC1.75□□□□□ -2.13
PHGDHO43175 SNRPGP13-201ENST00000442212 177 ntBASIC1.75□□□□□ -2.13
PHGDHO43175 RNU6-922P-201ENST00000516753 99 ntBASIC1.75□□□□□ -2.13
PHGDHO43175 MIR4422-201ENST00000581938 83 ntBASIC1.75□□□□□ -2.13
PHGDHO43175 Y_RNA.66-201ENST00000362862 102 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 Y_RNA.272-201ENST00000364696 102 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 RNU6-1336P-201ENST00000383886 109 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 RNU6-1065P-201ENST00000384513 106 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 RNU7-25P-201ENST00000516544 62 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 RNU6-504P-201ENST00000516568 104 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 RNU6-1270P-201ENST00000517128 108 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 MTND5P41-201ENST00000517498 206 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 AL160236.1-201ENST00000556317 195 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 MIR3144-201ENST00000579460 79 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 MIR3618-201ENST00000580330 88 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 MIR378D2-201ENST00000580636 98 ntBASIC1.74□□□□□ -2.13
PHGDHO43175 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PHGDHO43175 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PHGDHO43175 Y_RNA.398-201ENST00000383952 99 ntBASIC1.73□□□□□ -2.13
PHGDHO43175 RNU6-239P-201ENST00000390990 99 ntBASIC1.73□□□□□ -2.13
PHGDHO43175 RNU1-78P-201ENST00000391248 165 ntBASIC1.73□□□□□ -2.13
PHGDHO43175 AC027119.1-201ENST00000440877 241 ntBASIC1.73□□□□□ -2.13
PHGDHO43175 UBL5P3-201ENST00000475112 231 ntBASIC1.73□□□□□ -2.13
PHGDHO43175 RNU6-693P-201ENST00000516134 107 ntBASIC1.73□□□□□ -2.13
PHGDHO43175 AC007751.1-201ENST00000529260 376 ntBASIC1.73□□□□□ -2.13
PHGDHO43175 AC097639.2-201ENST00000603159 172 ntBASIC1.73□□□□□ -2.13
PHGDHO43175 AL513534.2-201ENST00000603836 250 ntBASIC1.73□□□□□ -2.13
PHGDHO43175 MIR3658-201ENST00000636291 56 ntBASIC1.73□□□□□ -2.13
PHGDHO43175 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms