Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SNORA26-201ENST00000391286 122 ntBASIC2.37□□□□□ -2.03
FOXN1O15353 AL627390.1-201ENST00000396055 340 ntBASIC2.37□□□□□ -2.03
FOXN1O15353 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.37□□□□□ -2.03
FOXN1O15353 AL445687.1-201ENST00000439946 251 ntBASIC2.37□□□□□ -2.03
FOXN1O15353 UBBP3-201ENST00000445497 241 ntBASIC2.37□□□□□ -2.03
FOXN1O15353 AL031737.1-201ENST00000450125 223 ntBASIC2.37□□□□□ -2.03
FOXN1O15353 AL021397.1-201ENST00000451806 248 ntBASIC2.37□□□□□ -2.03
FOXN1O15353 RNU6-717P-201ENST00000459076 104 ntBASIC2.37□□□□□ -2.03
FOXN1O15353 AC023141.11-201ENST00000508864 202 ntBASIC2.37□□□□□ -2.03
FOXN1O15353 AL365205.2-201ENST00000594586 68 ntBASIC2.37□□□□□ -2.03
FOXN1O15353 uc_338.28-201ENST00000612082 187 ntBASIC2.37□□□□□ -2.03
FOXN1O15353 AC009487.4-201ENST00000624969 3585 ntBASIC2.37□□□□□ -2.03
FOXN1O15353 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
FOXN1O15353 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
FOXN1O15353 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.36□□□□□ -2.03
FOXN1O15353 RNU6-32P-201ENST00000383948 107 ntBASIC2.36□□□□□ -2.03
FOXN1O15353 SNORA1-201ENST00000384107 130 ntBASIC2.36□□□□□ -2.03
FOXN1O15353 RNU6-13P-201ENST00000384248 107 ntBASIC2.36□□□□□ -2.03
FOXN1O15353 RNU6-12P-201ENST00000384604 107 ntBASIC2.36□□□□□ -2.03
FOXN1O15353 RNU6-41P-201ENST00000384741 107 ntBASIC2.36□□□□□ -2.03
FOXN1O15353 MIR1263-201ENST00000408324 86 ntBASIC2.36□□□□□ -2.03
FOXN1O15353 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.36□□□□□ -2.03
FOXN1O15353 ATP5J2P3-201ENST00000451550 258 ntBASIC2.36□□□□□ -2.03
FOXN1O15353 RNU6-365P-201ENST00000517113 106 ntBASIC2.36□□□□□ -2.03
FOXN1O15353 AC018630.3-201ENST00000542637 96 ntBASIC2.36□□□□□ -2.03
FOXN1O15353 MIR3129-201ENST00000581095 76 ntBASIC2.36□□□□□ -2.03
FOXN1O15353 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.36□□□□□ -2.03
FOXN1O15353 MIR6515-201ENST00000619843 57 ntBASIC2.36□□□□□ -2.03
FOXN1O15353 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
FOXN1O15353 Y_RNA.205-201ENST00000364128 113 ntBASIC2.35□□□□□ -2.03
FOXN1O15353 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
FOXN1O15353 AC004965.1-201ENST00000413033 213 ntBASIC2.35□□□□□ -2.03
FOXN1O15353 AF228730.3-201ENST00000436691 102 ntBASIC2.35□□□□□ -2.03
FOXN1O15353 NDUFA4P2-201ENST00000489989 244 ntBASIC2.35□□□□□ -2.03
FOXN1O15353 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
FOXN1O15353 MIR4662B-201ENST00000579498 81 ntBASIC2.35□□□□□ -2.03
FOXN1O15353 SNRPGP19-201ENST00000603826 189 ntBASIC2.35□□□□□ -2.03
FOXN1O15353 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.35□□□□□ -2.03
FOXN1O15353 AC022709.1-201ENST00000615967 87 ntBASIC2.35□□□□□ -2.03
FOXN1O15353 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
FOXN1O15353 SNORD56.5-201ENST00000364281 72 ntBASIC2.34□□□□□ -2.03
FOXN1O15353 RNU6-106P-201ENST00000384405 107 ntBASIC2.34□□□□□ -2.03
FOXN1O15353 MIR218-1-201ENST00000384999 110 ntBASIC2.34□□□□□ -2.03
FOXN1O15353 MIR95-201ENST00000385072 81 ntBASIC2.34□□□□□ -2.03
FOXN1O15353 SNORA48.3-201ENST00000391081 134 ntBASIC2.34□□□□□ -2.03
FOXN1O15353 RNY4P30-201ENST00000410216 95 ntBASIC2.34□□□□□ -2.03
FOXN1O15353 AC003989.2-201ENST00000440224 169 ntBASIC2.34□□□□□ -2.03
FOXN1O15353 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.34□□□□□ -2.03
FOXN1O15353 RPS29P24-201ENST00000486345 171 ntBASIC2.34□□□□□ -2.03
FOXN1O15353 RNU2-34P-201ENST00000516534 121 ntBASIC2.34□□□□□ -2.03
FOXN1O15353 RNU6-1096P-201ENST00000517089 102 ntBASIC2.34□□□□□ -2.03
FOXN1O15353 JPX_2.1-201ENST00000614161 69 ntBASIC2.34□□□□□ -2.03
FOXN1O15353 AL449363.1-201ENST00000617815 186 ntBASIC2.34□□□□□ -2.03
FOXN1O15353 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
FOXN1O15353 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.34□□□□□ -2.04
FOXN1O15353 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
FOXN1O15353 RNU6-743P-201ENST00000364151 106 ntBASIC2.33□□□□□ -2.04
FOXN1O15353 Y_RNA.621-201ENST00000411065 96 ntBASIC2.33□□□□□ -2.04
FOXN1O15353 MTATP6P21-201ENST00000440681 189 ntBASIC2.33□□□□□ -2.04
FOXN1O15353 MRPS17P9-201ENST00000511924 393 ntBASIC2.33□□□□□ -2.04
FOXN1O15353 RNA5SP236-201ENST00000516169 116 ntBASIC2.33□□□□□ -2.04
FOXN1O15353 Y_RNA.677-201ENST00000516401 85 ntBASIC2.33□□□□□ -2.04
FOXN1O15353 RNU6-504P-201ENST00000516568 104 ntBASIC2.33□□□□□ -2.04
FOXN1O15353 RNA5SP102-201ENST00000516865 106 ntBASIC2.33□□□□□ -2.04
FOXN1O15353 RNU6-537P-201ENST00000517277 103 ntBASIC2.33□□□□□ -2.04
FOXN1O15353 MIR8081-201ENST00000611533 95 ntBASIC2.33□□□□□ -2.04
FOXN1O15353 U6.73-201ENST00000619194 103 ntBASIC2.33□□□□□ -2.04
FOXN1O15353 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
FOXN1O15353 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
FOXN1O15353 Y_RNA.369-201ENST00000365568 117 ntBASIC2.32□□□□□ -2.04
FOXN1O15353 SNORD61-201ENST00000384252 73 ntBASIC2.32□□□□□ -2.04
FOXN1O15353 Y_RNA.528-201ENST00000384575 108 ntBASIC2.32□□□□□ -2.04
FOXN1O15353 SNORA67.5-201ENST00000391036 107 ntBASIC2.32□□□□□ -2.04
FOXN1O15353 RNU2-32P-201ENST00000411193 191 ntBASIC2.32□□□□□ -2.04
FOXN1O15353 RNU6-126P-201ENST00000516685 103 ntBASIC2.32□□□□□ -2.04
FOXN1O15353 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.32□□□□□ -2.04
FOXN1O15353 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
FOXN1O15353 SNORD114-22-201ENST00000365423 72 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 RNU6-546P-201ENST00000383991 107 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 RNU6-342P-201ENST00000384521 104 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 SNORA12.1-201ENST00000390873 148 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 SNORD72-201ENST00000390994 80 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 MIR1253-201ENST00000408273 105 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 RNU6-554P-201ENST00000410466 106 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 AC060773.1-201ENST00000421698 310 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 CALM2P4-201ENST00000430810 426 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 AC025033.1-201ENST00000463883 194 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 AC007012.1-201ENST00000567192 175 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 AC073413.2-201ENST00000604332 360 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 AL512598.1-201ENST00000610158 273 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 AC106754.2-201ENST00000623006 233 ntBASIC2.31□□□□□ -2.04
FOXN1O15353 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXN1O15353 MIR340-201ENST00000362125 95 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 RNA5SP393-201ENST00000363423 117 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 RNU1-96P-201ENST00000364163 162 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 Y_RNA.281-201ENST00000364774 94 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 RNU6-1107P-201ENST00000364817 104 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 RNA5SP138-201ENST00000365098 114 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 RNU6-1292P-201ENST00000383856 107 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms