Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 SNORD115-10-201ENST00000365073 81 ntBASIC2.38□□□□□ -2.03
SHOXO15266 SNORD115-43-201ENST00000365503 82 ntBASIC2.38□□□□□ -2.03
SHOXO15266 Y_RNA.366-201ENST00000365540 102 ntBASIC2.38□□□□□ -2.03
SHOXO15266 SNORD115-36-201ENST00000365629 82 ntBASIC2.38□□□□□ -2.03
SHOXO15266 RNY4P18-201ENST00000391107 89 ntBASIC2.38□□□□□ -2.03
SHOXO15266 RNU6-938P-201ENST00000411285 103 ntBASIC2.38□□□□□ -2.03
SHOXO15266 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.38□□□□□ -2.03
SHOXO15266 SCARNA16.3-201ENST00000516595 184 ntBASIC2.38□□□□□ -2.03
SHOXO15266 SNORD115-40-201ENST00000606510 82 ntBASIC2.38□□□□□ -2.03
SHOXO15266 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.38□□□□□ -2.03
SHOXO15266 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHOXO15266 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHOXO15266 AL035425.3-201ENST00000564206 4996 ntBASIC2.38□□□□□ -2.03
SHOXO15266 AL442644.1-201ENST00000454390 3105 ntBASIC2.37□□□□□ -2.03
SHOXO15266 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHOXO15266 RNU6-153P-201ENST00000364422 104 ntBASIC2.37□□□□□ -2.03
SHOXO15266 SNORA9.2-201ENST00000365361 133 ntBASIC2.37□□□□□ -2.03
SHOXO15266 SNORA27-201ENST00000384323 126 ntBASIC2.37□□□□□ -2.03
SHOXO15266 MIR136-201ENST00000385207 82 ntBASIC2.37□□□□□ -2.03
SHOXO15266 MIR1267-201ENST00000408723 78 ntBASIC2.37□□□□□ -2.03
SHOXO15266 AL035398.1-201ENST00000430869 322 ntBASIC2.37□□□□□ -2.03
SHOXO15266 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.37□□□□□ -2.03
SHOXO15266 RNU7-96P-201ENST00000459535 64 ntBASIC2.37□□□□□ -2.03
SHOXO15266 PDCD5P2-201ENST00000507570 312 ntBASIC2.37□□□□□ -2.03
SHOXO15266 AC008885.1-201ENST00000514930 301 ntBASIC2.37□□□□□ -2.03
SHOXO15266 SNORA31.25-201ENST00000517242 134 ntBASIC2.37□□□□□ -2.03
SHOXO15266 MIR8057-201ENST00000620957 69 ntBASIC2.37□□□□□ -2.03
SHOXO15266 SNORA3A-201ENST00000364113 130 ntBASIC2.36□□□□□ -2.03
SHOXO15266 SNORA70.7-201ENST00000384159 133 ntBASIC2.36□□□□□ -2.03
SHOXO15266 MIR570-201ENST00000384917 97 ntBASIC2.36□□□□□ -2.03
SHOXO15266 MIR660-201ENST00000385235 97 ntBASIC2.36□□□□□ -2.03
SHOXO15266 MIR759-201ENST00000390224 91 ntBASIC2.36□□□□□ -2.03
SHOXO15266 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SHOXO15266 RNA5SP450-201ENST00000411206 102 ntBASIC2.36□□□□□ -2.03
SHOXO15266 AC105272.1-201ENST00000438604 198 ntBASIC2.36□□□□□ -2.03
SHOXO15266 PGBD4P5-201ENST00000445958 426 ntBASIC2.36□□□□□ -2.03
SHOXO15266 RNU6-412P-201ENST00000516434 106 ntBASIC2.36□□□□□ -2.03
SHOXO15266 IGKV1-22-201ENST00000524313 326 ntBASIC2.36□□□□□ -2.03
SHOXO15266 MIR4325-201ENST00000583049 90 ntBASIC2.36□□□□□ -2.03
SHOXO15266 AC021506.2-201ENST00000612354 169 ntBASIC2.36□□□□□ -2.03
SHOXO15266 MIR6715A-201ENST00000615929 79 ntBASIC2.36□□□□□ -2.03
SHOXO15266 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.36□□□□□ -2.03
SHOXO15266 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SHOXO15266 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.36□□□□□ -2.03
SHOXO15266 MIR302B-201ENST00000362188 73 ntBASIC2.35□□□□□ -2.03
SHOXO15266 Y_RNA.213-201ENST00000364178 111 ntBASIC2.35□□□□□ -2.03
SHOXO15266 RNU6-301P-201ENST00000384277 107 ntBASIC2.35□□□□□ -2.03
SHOXO15266 Y_RNA.510-201ENST00000384511 114 ntBASIC2.35□□□□□ -2.03
SHOXO15266 RNU6-851P-201ENST00000384565 107 ntBASIC2.35□□□□□ -2.03
SHOXO15266 MIR512-1-201ENST00000384913 84 ntBASIC2.35□□□□□ -2.03
SHOXO15266 U8.17-201ENST00000391292 132 ntBASIC2.35□□□□□ -2.03
SHOXO15266 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.35□□□□□ -2.03
SHOXO15266 RNU7-193P-201ENST00000516723 65 ntBASIC2.35□□□□□ -2.03
SHOXO15266 AC090821.2-201ENST00000523552 176 ntBASIC2.35□□□□□ -2.03
SHOXO15266 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.35□□□□□ -2.03
SHOXO15266 MIR7106-201ENST00000612419 65 ntBASIC2.35□□□□□ -2.03
SHOXO15266 AC091932.4-201ENST00000623386 200 ntBASIC2.35□□□□□ -2.03
SHOXO15266 AC006386.2-201ENST00000624491 75 ntBASIC2.35□□□□□ -2.03
SHOXO15266 AC012005.1-201ENST00000624575 75 ntBASIC2.35□□□□□ -2.03
SHOXO15266 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.35□□□□□ -2.03
SHOXO15266 AL596211.1-201ENST00000569873 2277 ntBASIC2.35□□□□□ -2.03
SHOXO15266 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SHOXO15266 RNU6-349P-201ENST00000362402 107 ntBASIC2.34□□□□□ -2.03
SHOXO15266 SNORA5B-201ENST00000363786 132 ntBASIC2.34□□□□□ -2.03
SHOXO15266 RNU6-755P-201ENST00000364400 103 ntBASIC2.34□□□□□ -2.03
SHOXO15266 SNORA54-201ENST00000384281 123 ntBASIC2.34□□□□□ -2.03
SHOXO15266 MIR548A1-201ENST00000385041 97 ntBASIC2.34□□□□□ -2.03
SHOXO15266 SNX2P2-201ENST00000424553 323 ntBASIC2.34□□□□□ -2.03
SHOXO15266 RPS29P24-201ENST00000486345 171 ntBASIC2.34□□□□□ -2.03
SHOXO15266 AC021443.1-201ENST00000604478 211 ntBASIC2.34□□□□□ -2.03
SHOXO15266 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.34□□□□□ -2.03
SHOXO15266 SNORD3E-202ENST00000627253 216 ntBASIC2.34□□□□□ -2.03
SHOXO15266 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SHOXO15266 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.33□□□□□ -2.04
SHOXO15266 MIR422A-201ENST00000362286 90 ntBASIC2.33□□□□□ -2.04
SHOXO15266 Y_RNA.35-201ENST00000362601 101 ntBASIC2.33□□□□□ -2.04
SHOXO15266 SNORA22-201ENST00000383907 134 ntBASIC2.33□□□□□ -2.04
SHOXO15266 RNA5SP100-201ENST00000410903 110 ntBASIC2.33□□□□□ -2.04
SHOXO15266 RNA5SP59-201ENST00000410922 110 ntBASIC2.33□□□□□ -2.04
SHOXO15266 AC063976.4-201ENST00000421971 163 ntBASIC2.33□□□□□ -2.04
SHOXO15266 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.33□□□□□ -2.04
SHOXO15266 RN7SL429P-201ENST00000479090 223 ntBASIC2.33□□□□□ -2.04
SHOXO15266 RN7SL489P-201ENST00000486185 223 ntBASIC2.33□□□□□ -2.04
SHOXO15266 RN7SL327P-201ENST00000488659 223 ntBASIC2.33□□□□□ -2.04
SHOXO15266 AC079804.2-201ENST00000490376 200 ntBASIC2.33□□□□□ -2.04
SHOXO15266 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.33□□□□□ -2.04
SHOXO15266 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.33□□□□□ -2.04
SHOXO15266 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.33□□□□□ -2.04
SHOXO15266 RN7SL853P-201ENST00000617250 223 ntBASIC2.33□□□□□ -2.04
SHOXO15266 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.33□□□□□ -2.04
SHOXO15266 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.33□□□□□ -2.04
SHOXO15266 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SHOXO15266 MIR342-201ENST00000362212 99 ntBASIC2.32□□□□□ -2.04
SHOXO15266 MIR424-201ENST00000362227 98 ntBASIC2.32□□□□□ -2.04
SHOXO15266 MIR516B2-201ENST00000385190 85 ntBASIC2.32□□□□□ -2.04
SHOXO15266 RNU6-360P-201ENST00000390944 104 ntBASIC2.32□□□□□ -2.04
SHOXO15266 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.32□□□□□ -2.04
SHOXO15266 RNU6-998P-201ENST00000515894 101 ntBASIC2.32□□□□□ -2.04
SHOXO15266 MIR6840-201ENST00000611937 71 ntBASIC2.32□□□□□ -2.04
SHOXO15266 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms