Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 Y_RNA.802-201ENST00000614892 130 ntBASIC1.38□□□□□ -2.19
ATP2A1O14983 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
ATP2A1O14983 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.38□□□□□ -2.19
ATP2A1O14983 Y_RNA.242-201ENST00000364473 110 ntBASIC1.37□□□□□ -2.19
ATP2A1O14983 RNU1-93P-201ENST00000364704 169 ntBASIC1.37□□□□□ -2.19
ATP2A1O14983 Y_RNA.562-201ENST00000384695 113 ntBASIC1.37□□□□□ -2.19
ATP2A1O14983 SNORD41-201ENST00000386967 70 ntBASIC1.37□□□□□ -2.19
ATP2A1O14983 RNU6-383P-201ENST00000410864 94 ntBASIC1.37□□□□□ -2.19
ATP2A1O14983 AC023449.1-201ENST00000454464 154 ntBASIC1.37□□□□□ -2.19
ATP2A1O14983 MIR4452-201ENST00000583004 71 ntBASIC1.37□□□□□ -2.19
ATP2A1O14983 AC008507.4-201ENST00000585464 127 ntBASIC1.37□□□□□ -2.19
ATP2A1O14983 AL162730.1-201ENST00000605734 292 ntBASIC1.37□□□□□ -2.19
ATP2A1O14983 GHRLOS.1-201ENST00000610995 70 ntBASIC1.37□□□□□ -2.19
ATP2A1O14983 AL442644.1-201ENST00000454390 3105 ntBASIC1.37□□□□□ -2.19
ATP2A1O14983 RNU6-196P-201ENST00000384315 107 ntBASIC1.36□□□□□ -2.19
ATP2A1O14983 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
ATP2A1O14983 AL603910.2-201ENST00000407268 136 ntBASIC1.36□□□□□ -2.19
ATP2A1O14983 Y_RNA.590-201ENST00000410140 107 ntBASIC1.36□□□□□ -2.19
ATP2A1O14983 AC015922.2-201ENST00000435593 184 ntBASIC1.36□□□□□ -2.19
ATP2A1O14983 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.36□□□□□ -2.19
ATP2A1O14983 MIR4282-201ENST00000583613 67 ntBASIC1.36□□□□□ -2.19
ATP2A1O14983 U4.1-201ENST00000620349 87 ntBASIC1.36□□□□□ -2.19
ATP2A1O14983 Y_RNA.224-201ENST00000364308 111 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 SNORD114-22-201ENST00000365423 72 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 RNU6-442P-201ENST00000383968 104 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 SNORA8.3-201ENST00000384679 139 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 MIR15B-201ENST00000385045 98 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 MIR802-201ENST00000390235 94 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
ATP2A1O14983 RNU6-1132P-201ENST00000459214 107 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 COX6CP14-201ENST00000469580 174 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 Y_RNA.679-201ENST00000516416 91 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 AC090142.3-201ENST00000519012 385 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 AC100767.1-201ENST00000528178 123 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 FAM106DP-201ENST00000586416 501 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 AC006006.1-201ENST00000603082 144 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 AL357312.1-201ENST00000603879 298 ntBASIC1.35□□□□□ -2.19
ATP2A1O14983 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
ATP2A1O14983 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
ATP2A1O14983 MIR136-201ENST00000385207 82 ntBASIC1.34□□□□□ -2.19
ATP2A1O14983 RNU6-651P-201ENST00000411040 105 ntBASIC1.34□□□□□ -2.19
ATP2A1O14983 RN7SKP179-201ENST00000516126 217 ntBASIC1.34□□□□□ -2.19
ATP2A1O14983 Y_RNA.122-201ENST00000363331 96 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 Y_RNA.416-201ENST00000384014 113 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 Y_RNA.452-201ENST00000384202 108 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 SNORD38C-201ENST00000384381 69 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 MIR626-201ENST00000385032 94 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 MIR516B2-201ENST00000385190 85 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 SNRPGP14-201ENST00000435400 219 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 RN7SKP88-201ENST00000516847 250 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 RNU6-165P-201ENST00000517170 99 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.33□□□□□ -2.2
ATP2A1O14983 CYP3A52P-201ENST00000563326 91 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 AC062037.2-201ENST00000610137 73 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 7SK.8-201ENST00000612110 250 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 7SK.11-201ENST00000615477 250 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 uc_338.4-201ENST00000616635 176 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 7SK.13-201ENST00000622040 250 ntBASIC1.33□□□□□ -2.2
ATP2A1O14983 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
ATP2A1O14983 Y_RNA.54-201ENST00000362766 105 ntBASIC1.32□□□□□ -2.2
ATP2A1O14983 RNU4-10P-201ENST00000364383 140 ntBASIC1.32□□□□□ -2.2
ATP2A1O14983 Y_RNA.269-201ENST00000364685 89 ntBASIC1.32□□□□□ -2.2
ATP2A1O14983 RNU6-702P-201ENST00000364982 107 ntBASIC1.32□□□□□ -2.2
ATP2A1O14983 Y_RNA.304-201ENST00000365011 112 ntBASIC1.32□□□□□ -2.2
ATP2A1O14983 Y_RNA.350-201ENST00000365409 98 ntBASIC1.32□□□□□ -2.2
ATP2A1O14983 SNORD72-201ENST00000390994 80 ntBASIC1.32□□□□□ -2.2
ATP2A1O14983 MIR4503-201ENST00000582187 83 ntBASIC1.32□□□□□ -2.2
ATP2A1O14983 SNORA4-201ENST00000584302 138 ntBASIC1.32□□□□□ -2.2
ATP2A1O14983 BX284668.6-201ENST00000606899 438 ntBASIC1.32□□□□□ -2.2
ATP2A1O14983 MIR7111-201ENST00000619751 72 ntBASIC1.32□□□□□ -2.2
ATP2A1O14983 MIR8065-201ENST00000620577 100 ntBASIC1.32□□□□□ -2.2
ATP2A1O14983 Y_RNA.144-201ENST00000363521 113 ntBASIC1.31□□□□□ -2.2
ATP2A1O14983 Y_RNA.193-201ENST00000363979 102 ntBASIC1.31□□□□□ -2.2
ATP2A1O14983 Y_RNA.277-201ENST00000364754 102 ntBASIC1.31□□□□□ -2.2
ATP2A1O14983 RNU6-1138P-201ENST00000365359 106 ntBASIC1.31□□□□□ -2.2
ATP2A1O14983 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
ATP2A1O14983 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.31□□□□□ -2.2
ATP2A1O14983 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.31□□□□□ -2.2
ATP2A1O14983 MIR4643-201ENST00000577473 78 ntBASIC1.31□□□□□ -2.2
ATP2A1O14983 AL049861.1-201ENST00000603130 150 ntBASIC1.31□□□□□ -2.2
ATP2A1O14983 7SK.10-201ENST00000621414 298 ntBASIC1.31□□□□□ -2.2
ATP2A1O14983 MIR6767-201ENST00000637302 66 ntBASIC1.31□□□□□ -2.2
ATP2A1O14983 Y_RNA.24-201ENST00000362508 103 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 RNU6-268P-201ENST00000364174 107 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 Y_RNA.229-201ENST00000364347 113 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 RNU6-463P-201ENST00000384340 107 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 Y_RNA.478-201ENST00000384358 107 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 MIR222-201ENST00000384992 110 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 AC245047.8-201ENST00000456455 284 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.3□□□□□ -2.2
ATP2A1O14983 SNORD77.4-201ENST00000516158 81 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 RNU6-947P-201ENST00000516264 106 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 RNU7-149P-201ENST00000516739 59 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 MIR3149-201ENST00000584629 83 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 AC006441.5-201ENST00000612680 209 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 AL442067.1-201ENST00000613261 223 ntBASIC1.3□□□□□ -2.2
ATP2A1O14983 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
ATP2A1O14983 Y_RNA.20-201ENST00000362479 113 ntBASIC1.29□□□□□ -2.2
ATP2A1O14983 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.29□□□□□ -2.2
ATP2A1O14983 RPL39P39-201ENST00000455840 151 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms