Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.74□□□□□ -2.69
CHD1O14646 MIR382-201ENST00000637119 76 ntBASIC-1.74□□□□□ -2.69
CHD1O14646 RNU6-502P-201ENST00000362419 108 ntBASIC-1.74□□□□□ -2.69
CHD1O14646 RNU6-865P-201ENST00000364772 107 ntBASIC-1.74□□□□□ -2.69
CHD1O14646 RNU6-900P-201ENST00000384498 102 ntBASIC-1.74□□□□□ -2.69
CHD1O14646 AC244505.6-201ENST00000452829 130 ntBASIC-1.74□□□□□ -2.69
CHD1O14646 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.74□□□□□ -2.69
CHD1O14646 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.75□□□□□ -2.69
CHD1O14646 SNORD12C-201ENST00000386307 89 ntBASIC-1.75□□□□□ -2.69
CHD1O14646 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.75□□□□□ -2.69
CHD1O14646 FCF1P4-201ENST00000448326 183 ntBASIC-1.75□□□□□ -2.69
CHD1O14646 AC091179.3-201ENST00000474761 144 ntBASIC-1.75□□□□□ -2.69
CHD1O14646 AL133173.2-201ENST00000614270 90 ntBASIC-1.75□□□□□ -2.69
CHD1O14646 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.76□□□□□ -2.69
CHD1O14646 MIR517B-201ENST00000385102 67 ntBASIC-1.76□□□□□ -2.69
CHD1O14646 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.76□□□□□ -2.69
CHD1O14646 RPL30P15-201ENST00000457129 321 ntBASIC-1.76□□□□□ -2.69
CHD1O14646 RNU6-175P-201ENST00000516896 107 ntBASIC-1.76□□□□□ -2.69
CHD1O14646 RNU7-161P-201ENST00000517289 62 ntBASIC-1.76□□□□□ -2.69
CHD1O14646 AC005972.2-201ENST00000604690 348 ntBASIC-1.76□□□□□ -2.69
CHD1O14646 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 RNU6-169P-201ENST00000365336 107 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 RNU6-933P-201ENST00000384424 107 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 RNU6-809P-201ENST00000384461 107 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.77□□□□□ -2.69
CHD1O14646 RNU7-167P-201ENST00000459160 62 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.77□□□□□ -2.69
CHD1O14646 PIGPP4-201ENST00000584447 307 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 MIR6129-201ENST00000616087 109 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 AC072046.2-201ENST00000618366 268 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 AL512427.1-201ENST00000618593 349 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 RNU6-281P-201ENST00000384212 103 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 U8.15-201ENST00000390947 134 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 SNORA40.5-201ENST00000391061 128 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 RNU6-437P-201ENST00000459408 95 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 AC016550.1-201ENST00000505348 785 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 SNORD22.1-201ENST00000516331 125 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 CPDP1-201ENST00000579660 283 ntBASIC-1.77□□□□□ -2.69
CHD1O14646 SNORD74.6-201ENST00000364796 70 ntBASIC-1.78□□□□□ -2.69
CHD1O14646 AP000533.3-201ENST00000447704 118 ntBASIC-1.78□□□□□ -2.69
CHD1O14646 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.78□□□□□ -2.69
CHD1O14646 DEFB131E-201ENST00000532329 154 ntBASIC-1.78□□□□□ -2.69
CHD1O14646 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.78□□□□□ -2.69
CHD1O14646 RNU6-702P-201ENST00000364982 107 ntBASIC-1.79□□□□□ -2.7
CHD1O14646 SNORD116.1-201ENST00000365628 92 ntBASIC-1.79□□□□□ -2.7
CHD1O14646 RNU6-431P-201ENST00000383874 107 ntBASIC-1.79□□□□□ -2.7
CHD1O14646 RNU6-540P-201ENST00000384622 101 ntBASIC-1.79□□□□□ -2.7
CHD1O14646 RNU6-757P-201ENST00000410334 100 ntBASIC-1.79□□□□□ -2.7
CHD1O14646 SNORD54-201ENST00000459159 67 ntBASIC-1.79□□□□□ -2.7
CHD1O14646 AC022137.1-201ENST00000483735 151 ntBASIC-1.79□□□□□ -2.7
CHD1O14646 RPL30P10-201ENST00000488148 337 ntBASIC-1.79□□□□□ -2.7
CHD1O14646 RNU6-410P-201ENST00000517006 107 ntBASIC-1.79□□□□□ -2.7
CHD1O14646 AC109347.2-201ENST00000610220 349 ntBASIC-1.79□□□□□ -2.7
CHD1O14646 JPX_2.1-201ENST00000614161 69 ntBASIC-1.79□□□□□ -2.7
CHD1O14646 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.8□□□□□ -2.7
CHD1O14646 RNU4-75P-201ENST00000364621 146 ntBASIC-1.8□□□□□ -2.7
CHD1O14646 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.8□□□□□ -2.7
CHD1O14646 RNA5SP237-201ENST00000410414 113 ntBASIC-1.8□□□□□ -2.7
CHD1O14646 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.8□□□□□ -2.7
CHD1O14646 RPL30P16-201ENST00000419341 429 ntBASIC-1.8□□□□□ -2.7
CHD1O14646 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.8□□□□□ -2.7
CHD1O14646 RNA5SP272-201ENST00000516095 111 ntBASIC-1.8□□□□□ -2.7
CHD1O14646 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.8□□□□□ -2.7
CHD1O14646 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.8□□□□□ -2.7
CHD1O14646 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.8□□□□□ -2.7
CHD1O14646 RNU6-454P-201ENST00000364292 107 ntBASIC-1.8□□□□□ -2.7
CHD1O14646 RNU6-108P-201ENST00000365558 107 ntBASIC-1.8□□□□□ -2.7
CHD1O14646 MIR410-201ENST00000362222 80 ntBASIC-1.81□□□□□ -2.7
CHD1O14646 RNU6-606P-201ENST00000384721 111 ntBASIC-1.81□□□□□ -2.7
CHD1O14646 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.81□□□□□ -2.7
CHD1O14646 MTND2P3-201ENST00000452458 470 ntBASIC-1.81□□□□□ -2.7
CHD1O14646 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.81□□□□□ -2.7
CHD1O14646 AC022878.1-201ENST00000530684 149 ntBASIC-1.81□□□□□ -2.7
CHD1O14646 RNU4-28P-201ENST00000364739 141 ntBASIC-1.82□□□□□ -2.7
CHD1O14646 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.82□□□□□ -2.7
CHD1O14646 MIR521-1-201ENST00000384902 87 ntBASIC-1.82□□□□□ -2.7
CHD1O14646 MTCO2P21-201ENST00000419780 677 ntBASIC-1.82□□□□□ -2.7
CHD1O14646 AC027807.2-201ENST00000616099 408 ntBASIC-1.82□□□□□ -2.7
CHD1O14646 RNU4-58P-201ENST00000363192 141 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 MTND2P18-201ENST00000419962 1030 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 USP9YP30-201ENST00000430729 455 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 MTND3P1-201ENST00000441336 220 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 AP000676.1-201ENST00000533307 52 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 AC092807.2-201ENST00000609367 243 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 SNORA72.6-201ENST00000384520 129 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 RNU6-159P-201ENST00000391080 106 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 Vault.3-201ENST00000516676 95 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 MIR4703-201ENST00000577728 79 ntBASIC-1.83□□□□□ -2.7
CHD1O14646 SNORD115-34-201ENST00000362441 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-12-201ENST00000362583 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-29-201ENST00000362834 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-9-201ENST00000362912 82 ntBASIC-1.84□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms