Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 Y_RNA.274-201ENST00000364714 101 ntBASIC1.2□□□□□ -2.22
CDX4O14627 RNU6-923P-201ENST00000364753 107 ntBASIC1.2□□□□□ -2.22
CDX4O14627 Y_RNA.308-201ENST00000365043 101 ntBASIC1.2□□□□□ -2.22
CDX4O14627 SNORA4.2-201ENST00000365313 147 ntBASIC1.2□□□□□ -2.22
CDX4O14627 SNORA72-201ENST00000384339 132 ntBASIC1.2□□□□□ -2.22
CDX4O14627 MIR520G-201ENST00000385064 90 ntBASIC1.2□□□□□ -2.22
CDX4O14627 RNU6-847P-201ENST00000411115 108 ntBASIC1.2□□□□□ -2.22
CDX4O14627 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.2□□□□□ -2.22
CDX4O14627 RNU6-138P-201ENST00000515952 107 ntBASIC1.2□□□□□ -2.22
CDX4O14627 RNU7-116P-201ENST00000516940 62 ntBASIC1.2□□□□□ -2.22
CDX4O14627 RNU6-341P-201ENST00000516973 96 ntBASIC1.2□□□□□ -2.22
CDX4O14627 RNU6-794P-201ENST00000517261 64 ntBASIC1.2□□□□□ -2.22
CDX4O14627 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.2□□□□□ -2.22
CDX4O14627 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.2□□□□□ -2.22
CDX4O14627 MIR8054-201ENST00000620877 86 ntBASIC1.2□□□□□ -2.22
CDX4O14627 MIR8063-201ENST00000621930 81 ntBASIC1.2□□□□□ -2.22
CDX4O14627 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.2□□□□□ -2.22
CDX4O14627 Y_RNA.24-201ENST00000362508 103 ntBASIC1.19□□□□□ -2.22
CDX4O14627 SNORA1B-201ENST00000362535 133 ntBASIC1.19□□□□□ -2.22
CDX4O14627 Y_RNA.83-201ENST00000363005 113 ntBASIC1.19□□□□□ -2.22
CDX4O14627 RNU6-653P-201ENST00000363074 106 ntBASIC1.19□□□□□ -2.22
CDX4O14627 Y_RNA.297-201ENST00000364950 91 ntBASIC1.19□□□□□ -2.22
CDX4O14627 Y_RNA.304-201ENST00000365011 112 ntBASIC1.19□□□□□ -2.22
CDX4O14627 RNU6-1065P-201ENST00000384513 106 ntBASIC1.19□□□□□ -2.22
CDX4O14627 RNU6-1031P-201ENST00000384773 107 ntBASIC1.19□□□□□ -2.22
CDX4O14627 RNU6-440P-201ENST00000390882 105 ntBASIC1.19□□□□□ -2.22
CDX4O14627 RNU1-78P-201ENST00000391248 165 ntBASIC1.19□□□□□ -2.22
CDX4O14627 RNU6-493P-201ENST00000391321 108 ntBASIC1.19□□□□□ -2.22
CDX4O14627 PGBD4P5-201ENST00000445958 426 ntBASIC1.19□□□□□ -2.22
CDX4O14627 RNU6-437P-201ENST00000459408 95 ntBASIC1.19□□□□□ -2.22
CDX4O14627 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.19□□□□□ -2.22
CDX4O14627 SNORA31.10-201ENST00000516482 106 ntBASIC1.19□□□□□ -2.22
CDX4O14627 MIR411-201ENST00000362239 96 ntBASIC1.18□□□□□ -2.22
CDX4O14627 Y_RNA.203-201ENST00000364106 102 ntBASIC1.18□□□□□ -2.22
CDX4O14627 Y_RNA.262-201ENST00000364641 102 ntBASIC1.18□□□□□ -2.22
CDX4O14627 RNU6-200P-201ENST00000364743 107 ntBASIC1.18□□□□□ -2.22
CDX4O14627 RNU6-47P-201ENST00000383866 107 ntBASIC1.18□□□□□ -2.22
CDX4O14627 RNU6-969P-201ENST00000383900 105 ntBASIC1.18□□□□□ -2.22
CDX4O14627 Y_RNA.393-201ENST00000383936 102 ntBASIC1.18□□□□□ -2.22
CDX4O14627 MIR626-201ENST00000385032 94 ntBASIC1.18□□□□□ -2.22
CDX4O14627 AL161935.2-201ENST00000414627 60 ntBASIC1.18□□□□□ -2.22
CDX4O14627 MTND5P15-201ENST00000434246 349 ntBASIC1.18□□□□□ -2.22
CDX4O14627 AC079140.2-201ENST00000506193 142 ntBASIC1.18□□□□□ -2.22
CDX4O14627 RNA5SP61-201ENST00000516453 100 ntBASIC1.18□□□□□ -2.22
CDX4O14627 RNU7-28P-201ENST00000516759 62 ntBASIC1.18□□□□□ -2.22
CDX4O14627 RNU2-56P-201ENST00000516826 190 ntBASIC1.18□□□□□ -2.22
CDX4O14627 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.18□□□□□ -2.22
CDX4O14627 AC100767.1-201ENST00000528178 123 ntBASIC1.18□□□□□ -2.22
CDX4O14627 Y_RNA.802-201ENST00000614892 130 ntBASIC1.18□□□□□ -2.22
CDX4O14627 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CDX4O14627 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDX4O14627 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDX4O14627 snoU2_19.4-201ENST00000364329 80 ntBASIC1.17□□□□□ -2.22
CDX4O14627 RNU6-144P-201ENST00000383951 107 ntBASIC1.17□□□□□ -2.22
CDX4O14627 SNORA8.3-201ENST00000384679 139 ntBASIC1.17□□□□□ -2.22
CDX4O14627 RNU6-907P-201ENST00000390924 102 ntBASIC1.17□□□□□ -2.22
CDX4O14627 Z98949.2-201ENST00000440996 144 ntBASIC1.17□□□□□ -2.22
CDX4O14627 AL049830.1-201ENST00000468034 425 ntBASIC1.17□□□□□ -2.22
CDX4O14627 RNU6-113P-201ENST00000516653 101 ntBASIC1.17□□□□□ -2.22
CDX4O14627 RNU6-453P-201ENST00000516819 85 ntBASIC1.17□□□□□ -2.22
CDX4O14627 AC022559.1-201ENST00000520905 205 ntBASIC1.17□□□□□ -2.22
CDX4O14627 AP002004.2-201ENST00000531656 154 ntBASIC1.17□□□□□ -2.22
CDX4O14627 MIR4724-201ENST00000579485 89 ntBASIC1.17□□□□□ -2.22
CDX4O14627 MIR4308-201ENST00000580634 81 ntBASIC1.17□□□□□ -2.22
CDX4O14627 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CDX4O14627 AL161722.3-201ENST00000605789 2983 ntBASIC1.16□□□□□ -2.22
CDX4O14627 MIR367-201ENST00000362299 68 ntBASIC1.16□□□□□ -2.22
CDX4O14627 RNU6-1209P-201ENST00000363655 107 ntBASIC1.16□□□□□ -2.22
CDX4O14627 RNU4-41P-201ENST00000364426 143 ntBASIC1.16□□□□□ -2.22
CDX4O14627 Y_RNA.265-201ENST00000364677 108 ntBASIC1.16□□□□□ -2.22
CDX4O14627 MIR194-1-201ENST00000384892 85 ntBASIC1.16□□□□□ -2.22
CDX4O14627 MIR513A1-201ENST00000385138 129 ntBASIC1.16□□□□□ -2.22
CDX4O14627 MT-TT-201ENST00000387460 66 ntBASIC1.16□□□□□ -2.22
CDX4O14627 MIR526A2-201ENST00000390198 65 ntBASIC1.16□□□□□ -2.22
CDX4O14627 SNORA12.1-201ENST00000390873 148 ntBASIC1.16□□□□□ -2.22
CDX4O14627 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.16□□□□□ -2.22
CDX4O14627 MLLT10P1-201ENST00000418346 262 ntBASIC1.16□□□□□ -2.22
CDX4O14627 STAG3L5P-204ENST00000443759 179 ntBASIC1.16□□□□□ -2.22
CDX4O14627 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.16□□□□□ -2.22
CDX4O14627 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.16□□□□□ -2.22
CDX4O14627 Y_RNA.644-201ENST00000459006 113 ntBASIC1.16□□□□□ -2.22
CDX4O14627 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
CDX4O14627 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.16□□□□□ -2.22
CDX4O14627 SCARNA8-201ENST00000515924 131 ntBASIC1.16□□□□□ -2.22
CDX4O14627 Y_RNA.674-201ENST00000516362 113 ntBASIC1.16□□□□□ -2.22
CDX4O14627 AC019176.1-201ENST00000518519 225 ntBASIC1.16□□□□□ -2.22
CDX4O14627 AL358944.1-201ENST00000528537 144 ntBASIC1.16□□□□□ -2.22
CDX4O14627 RPL23AP91-201ENST00000569211 455 ntBASIC1.16□□□□□ -2.22
CDX4O14627 AC015688.6-201ENST00000577737 104 ntBASIC1.16□□□□□ -2.22
CDX4O14627 MIR3937-201ENST00000580135 106 ntBASIC1.16□□□□□ -2.22
CDX4O14627 MIR3668-201ENST00000582138 75 ntBASIC1.16□□□□□ -2.22
CDX4O14627 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
CDX4O14627 AC021506.2-201ENST00000612354 169 ntBASIC1.16□□□□□ -2.22
CDX4O14627 AL591926.4-201ENST00000616895 298 ntBASIC1.16□□□□□ -2.22
CDX4O14627 AL513423.1-201ENST00000621695 132 ntBASIC1.16□□□□□ -2.22
CDX4O14627 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CDX4O14627 RNU6-674P-201ENST00000363831 107 ntBASIC1.15□□□□□ -2.23
CDX4O14627 Y_RNA.229-201ENST00000364347 113 ntBASIC1.15□□□□□ -2.23
CDX4O14627 Y_RNA.253-201ENST00000364562 112 ntBASIC1.15□□□□□ -2.23
CDX4O14627 SNORD1A-201ENST00000364968 72 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms