Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.68□□□□□ -2.3
SLC28A1O00337 RNA5SP95-201ENST00000410319 137 ntBASIC0.68□□□□□ -2.3
SLC28A1O00337 RNU6-101P-201ENST00000410323 104 ntBASIC0.68□□□□□ -2.3
SLC28A1O00337 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
SLC28A1O00337 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
SLC28A1O00337 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
SLC28A1O00337 RNU6-897P-201ENST00000517135 105 ntBASIC0.68□□□□□ -2.3
SLC28A1O00337 Y_RNA.721-201ENST00000517207 102 ntBASIC0.68□□□□□ -2.3
SLC28A1O00337 AC012433.1-201ENST00000588916 398 ntBASIC0.68□□□□□ -2.3
SLC28A1O00337 MIR4791-201ENST00000607666 84 ntBASIC0.68□□□□□ -2.3
SLC28A1O00337 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 MIR373-201ENST00000362273 69 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 RNA5SP432-201ENST00000362480 116 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 Y_RNA.389-201ENST00000383924 113 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 RNU6-474P-201ENST00000384243 107 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 MIR1252-201ENST00000408861 65 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 RNU6-121P-201ENST00000410525 99 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 RNU6-847P-201ENST00000411115 108 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.67□□□□□ -2.3
SLC28A1O00337 MTCO1P5-201ENST00000433573 344 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 MRPS35P2-201ENST00000508242 191 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 RNU4-57P-201ENST00000515980 135 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.67□□□□□ -2.3
SLC28A1O00337 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.67□□□□□ -2.3
SLC28A1O00337 MIR3124-201ENST00000582636 67 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 AL512605.2-201ENST00000592972 256 ntBASIC0.67□□□□□ -2.3
SLC28A1O00337 Y_RNA.581-201ENST00000391017 97 ntBASIC0.66□□□□□ -2.3
SLC28A1O00337 MTND4LP30-201ENST00000454092 297 ntBASIC0.66□□□□□ -2.3
SLC28A1O00337 MIR548AO-201ENST00000579992 96 ntBASIC0.66□□□□□ -2.3
SLC28A1O00337 MTND1P7-201ENST00000632801 297 ntBASIC0.66□□□□□ -2.3
SLC28A1O00337 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.65□□□□□ -2.31
SLC28A1O00337 Y_RNA.14-201ENST00000362415 103 ntBASIC0.65□□□□□ -2.31
SLC28A1O00337 Y_RNA.168-201ENST00000363740 102 ntBASIC0.65□□□□□ -2.31
SLC28A1O00337 RNU6-290P-201ENST00000365212 101 ntBASIC0.65□□□□□ -2.31
SLC28A1O00337 MIR1827-201ENST00000408549 66 ntBASIC0.65□□□□□ -2.31
SLC28A1O00337 SNORA40.15-201ENST00000516884 107 ntBASIC0.65□□□□□ -2.31
SLC28A1O00337 RNU6-988P-201ENST00000519081 107 ntBASIC0.65□□□□□ -2.31
SLC28A1O00337 AP001094.1-201ENST00000579805 193 ntBASIC0.65□□□□□ -2.31
SLC28A1O00337 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
SLC28A1O00337 AC037487.3-201ENST00000606668 112 ntBASIC0.65□□□□□ -2.31
SLC28A1O00337 AC013791.1-201ENST00000616619 62 ntBASIC0.65□□□□□ -2.31
SLC28A1O00337 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
SLC28A1O00337 MIR6767-201ENST00000637302 66 ntBASIC0.65□□□□□ -2.31
SLC28A1O00337 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.64□□□□□ -2.31
SLC28A1O00337 MIR1-1-201ENST00000362147 71 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 MIR367-201ENST00000362299 68 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 Y_RNA.26-201ENST00000362539 101 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 Y_RNA.28-201ENST00000362554 111 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 RNU6-514P-201ENST00000384208 107 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 RNU6-383P-201ENST00000410864 94 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 MTND4LP11-201ENST00000422184 280 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 RNU7-25P-201ENST00000516544 62 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 uc_338.4-201ENST00000616635 176 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 AC243994.1-201ENST00000618627 109 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 AL160413.1-201ENST00000622780 310 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 AC022140.2-201ENST00000623500 188 ntBASIC0.64□□□□□ -2.31
SLC28A1O00337 SNORA25.1-201ENST00000362326 128 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 Y_RNA.138-201ENST00000363462 102 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 RNU6-806P-201ENST00000365147 105 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 Y_RNA.376-201ENST00000365638 108 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 Y_RNA.380-201ENST00000365663 111 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SLC28A1O00337 MT-TN-201ENST00000387400 73 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 SNORA53-201ENST00000391141 249 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 RNA5SP496-201ENST00000391240 109 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 MIR548O-201ENST00000408583 114 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 Y_RNA.638-201ENST00000459374 113 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 Y_RNA.631-201ENST00000459607 101 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 AC107297.1-201ENST00000459991 176 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 RNU2-13P-201ENST00000515909 113 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 RNU7-149P-201ENST00000516739 59 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 RNU2-31P-201ENST00000516954 155 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 AL021707.8-201ENST00000609428 183 ntBASIC0.63□□□□□ -2.31
SLC28A1O00337 MIR377-201ENST00000362145 69 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 MIR96-201ENST00000362288 78 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 RNU6-1272P-201ENST00000362776 107 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 Y_RNA.216-201ENST00000364205 93 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 Y_RNA.460-201ENST00000384255 102 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 Y_RNA.547-201ENST00000384654 119 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 Y_RNA.637-201ENST00000459424 114 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 AC098869.1-201ENST00000481627 292 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.62□□□□□ -2.31
SLC28A1O00337 MIR5692C2-201ENST00000577959 77 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 MIR4724-201ENST00000579485 89 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 AL049861.1-201ENST00000603130 150 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 AP000753.3-201ENST00000604083 169 ntBASIC0.62□□□□□ -2.31
SLC28A1O00337 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.62□□□□□ -2.31
SLC28A1O00337 snoU2_19.2-201ENST00000363024 80 ntBASIC0.61□□□□□ -2.31
SLC28A1O00337 RNU1-93P-201ENST00000364704 169 ntBASIC0.61□□□□□ -2.31
SLC28A1O00337 MIR215-201ENST00000384858 110 ntBASIC0.61□□□□□ -2.31
SLC28A1O00337 SNORD105-201ENST00000386910 85 ntBASIC0.61□□□□□ -2.31
SLC28A1O00337 RPL21P38-201ENST00000418090 167 ntBASIC0.61□□□□□ -2.31
SLC28A1O00337 BTF3P11-201ENST00000426582 477 ntBASIC0.61□□□□□ -2.31
SLC28A1O00337 AC011195.1-201ENST00000578177 177 ntBASIC0.61□□□□□ -2.31
SLC28A1O00337 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.61□□□□□ -2.31
SLC28A1O00337 Y_RNA.293-201ENST00000364908 93 ntBASIC0.6□□□□□ -2.31
SLC28A1O00337 RNU6-1138P-201ENST00000365359 106 ntBASIC0.6□□□□□ -2.31
SLC28A1O00337 RNU6-326P-201ENST00000365480 107 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms