Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC015922.2-201ENST00000435593 184 ntBASIC2.22□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.22□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6-346P-201ENST00000516288 111 ntBASIC2.22□□□□□ -2.05
CCDC163A0A0D9SF12 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 RNU6-457P-201ENST00000363999 107 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 SNORA25.7-201ENST00000364375 127 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 RNU4-11P-201ENST00000365287 132 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 RNU2-40P-201ENST00000410833 196 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 SUMO1P3-201ENST00000439961 304 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 JTBP1-201ENST00000441314 247 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 AC090255.1-201ENST00000495779 349 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 RNU7-25P-201ENST00000516544 62 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 AL160236.1-201ENST00000556317 195 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 AC022254.1-201ENST00000567857 235 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 MIR3129-201ENST00000581095 76 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 MIR3133-201ENST00000583157 78 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 AL365434.2-201ENST00000607979 234 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 AC009831.4-201ENST00000620744 325 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 MTND1P7-201ENST00000632801 297 ntBASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC163A0A0D9SF12 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 Y_RNA.66-201ENST00000362862 102 ntBASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 DEFA7P-201ENST00000382676 285 ntBASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 Y_RNA.393-201ENST00000383936 102 ntBASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 RNU6-588P-201ENST00000410281 105 ntBASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 AL445646.1-201ENST00000431784 216 ntBASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 RNU7-121P-201ENST00000516604 62 ntBASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 RNU6-1212P-201ENST00000517023 104 ntBASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 AP000942.3-201ENST00000603702 160 ntBASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 AC006441.5-201ENST00000612680 209 ntBASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 MIR8074-201ENST00000615081 81 ntBASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 Y_RNA.778-201ENST00000620203 90 ntBASIC2.2□□□□□ -2.06
CCDC163A0A0D9SF12 RNU6-1123P-201ENST00000362347 106 ntBASIC2.19□□□□□ -2.06
CCDC163A0A0D9SF12 RNU6-661P-201ENST00000362409 107 ntBASIC2.19□□□□□ -2.06
CCDC163A0A0D9SF12 Y_RNA.506-201ENST00000384494 102 ntBASIC2.19□□□□□ -2.06
CCDC163A0A0D9SF12 MIR452-201ENST00000385020 85 ntBASIC2.19□□□□□ -2.06
CCDC163A0A0D9SF12 Y_RNA.580-201ENST00000391004 95 ntBASIC2.19□□□□□ -2.06
CCDC163A0A0D9SF12 RNA5SP247-201ENST00000411181 105 ntBASIC2.19□□□□□ -2.06
CCDC163A0A0D9SF12 SNORA18.4-201ENST00000516440 124 ntBASIC2.19□□□□□ -2.06
CCDC163A0A0D9SF12 MIR8063-201ENST00000621930 81 ntBASIC2.19□□□□□ -2.06
CCDC163A0A0D9SF12 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC163A0A0D9SF12 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC163A0A0D9SF12 RNU6-978P-201ENST00000364371 103 ntBASIC2.18□□□□□ -2.06
CCDC163A0A0D9SF12 SNORA1-201ENST00000384107 130 ntBASIC2.18□□□□□ -2.06
CCDC163A0A0D9SF12 SNORA67.3-201ENST00000384366 140 ntBASIC2.18□□□□□ -2.06
CCDC163A0A0D9SF12 Y_RNA.547-201ENST00000384654 119 ntBASIC2.18□□□□□ -2.06
CCDC163A0A0D9SF12 MIR513A1-201ENST00000385138 129 ntBASIC2.18□□□□□ -2.06
CCDC163A0A0D9SF12 SNRPGP14-201ENST00000435400 219 ntBASIC2.18□□□□□ -2.06
CCDC163A0A0D9SF12 RNA5SP182-201ENST00000516064 82 ntBASIC2.18□□□□□ -2.06
CCDC163A0A0D9SF12 RNU7-200P-201ENST00000516105 62 ntBASIC2.18□□□□□ -2.06
CCDC163A0A0D9SF12 AC090142.3-201ENST00000519012 385 ntBASIC2.18□□□□□ -2.06
CCDC163A0A0D9SF12 FAM106DP-201ENST00000586416 501 ntBASIC2.18□□□□□ -2.06
CCDC163A0A0D9SF12 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC163A0A0D9SF12 RNU6-1082P-201ENST00000364574 107 ntBASIC2.17□□□□□ -2.06
CCDC163A0A0D9SF12 MIR136-201ENST00000385207 82 ntBASIC2.17□□□□□ -2.06
CCDC163A0A0D9SF12 MIR513C-201ENST00000401352 84 ntBASIC2.17□□□□□ -2.06
CCDC163A0A0D9SF12 AC097639.2-201ENST00000603159 172 ntBASIC2.17□□□□□ -2.06
CCDC163A0A0D9SF12 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CCDC163A0A0D9SF12 MIR21-201ENST00000362134 72 ntBASIC2.16□□□□□ -2.06
CCDC163A0A0D9SF12 RNU6-888P-201ENST00000363010 101 ntBASIC2.16□□□□□ -2.06
CCDC163A0A0D9SF12 SNORD24-201ENST00000383884 75 ntBASIC2.16□□□□□ -2.06
CCDC163A0A0D9SF12 Y_RNA.400-201ENST00000383963 111 ntBASIC2.16□□□□□ -2.06
CCDC163A0A0D9SF12 AC019129.1-201ENST00000403786 261 ntBASIC2.16□□□□□ -2.06
CCDC163A0A0D9SF12 AL023284.1-201ENST00000403956 276 ntBASIC2.16□□□□□ -2.06
CCDC163A0A0D9SF12 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC163A0A0D9SF12 SNORA25.12-201ENST00000516202 82 ntBASIC2.16□□□□□ -2.06
CCDC163A0A0D9SF12 AC112693.2-201ENST00000556538 232 ntBASIC2.16□□□□□ -2.06
CCDC163A0A0D9SF12 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.06
CCDC163A0A0D9SF12 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.06
CCDC163A0A0D9SF12 SNORD115-28-201ENST00000363931 81 ntBASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 Y_RNA.338-201ENST00000365320 114 ntBASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 RNU6-125P-201ENST00000384505 107 ntBASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 MIR194-1-201ENST00000384892 85 ntBASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 MIR518F-201ENST00000384973 87 ntBASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 AL603908.1-201ENST00000406098 201 ntBASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 AF228730.3-201ENST00000436691 102 ntBASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 AC007751.1-201ENST00000529260 376 ntBASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 AC103810.8-201ENST00000607347 118 ntBASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC163A0A0D9SF12 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CCDC163A0A0D9SF12 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
CCDC163A0A0D9SF12 Y_RNA.215-201ENST00000364204 112 ntBASIC2.14□□□□□ -2.07
CCDC163A0A0D9SF12 Y_RNA.488-201ENST00000384403 102 ntBASIC2.14□□□□□ -2.07
CCDC163A0A0D9SF12 MIR526A1-201ENST00000384897 85 ntBASIC2.14□□□□□ -2.07
CCDC163A0A0D9SF12 MIR548A2-201ENST00000384956 97 ntBASIC2.14□□□□□ -2.07
CCDC163A0A0D9SF12 MIR30A-201ENST00000385092 71 ntBASIC2.14□□□□□ -2.07
CCDC163A0A0D9SF12 SNORA75.5-201ENST00000391291 81 ntBASIC2.14□□□□□ -2.07
CCDC163A0A0D9SF12 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.14□□□□□ -2.07
CCDC163A0A0D9SF12 SNORA18.7-201ENST00000516910 131 ntBASIC2.14□□□□□ -2.07
CCDC163A0A0D9SF12 MIR3198-2-201ENST00000577868 80 ntBASIC2.14□□□□□ -2.07
CCDC163A0A0D9SF12 MIR3646-201ENST00000578301 84 ntBASIC2.14□□□□□ -2.07
CCDC163A0A0D9SF12 MIR6073-201ENST00000352083 89 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 RNU6-597P-201ENST00000365620 102 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms