Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 SNORA26.5-201ENST00000391215 123 ntBASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-847P-201ENST00000411115 108 ntBASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-977P-201ENST00000516411 103 ntBASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 SNORA40.14-201ENST00000516543 86 ntBASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-1007P-201ENST00000516586 107 ntBASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 AP000753.3-201ENST00000604083 169 ntBASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-369P-201ENST00000362515 102 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.58-201ENST00000362807 102 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.154-201ENST00000363624 102 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-674P-201ENST00000363831 107 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 RNU4-50P-201ENST00000364361 141 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 RNU1-133P-201ENST00000364867 167 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 RNY3P1-201ENST00000365085 102 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-934P-201ENST00000365154 107 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-125P-201ENST00000384505 107 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 RNU7-152P-201ENST00000458982 64 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 SNORD11-201ENST00000459124 84 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 RNU7-25P-201ENST00000516544 62 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 MIR4771-2-201ENST00000577758 74 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 MIR4771-1-201ENST00000582617 74 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 SNORA4-201ENST00000584302 138 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 AC006157.1-201ENST00000611750 366 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 AC006441.5-201ENST00000612680 209 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 RMST_2.1-201ENST00000617263 136 ntBASIC0.37□□□□□ -2.35
TRAV39A0A0B4J263 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.252-201ENST00000364556 101 ntBASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.529-201ENST00000384586 119 ntBASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 MIR140-201ENST00000385282 100 ntBASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-308P-201ENST00000390957 107 ntBASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-130P-201ENST00000411112 103 ntBASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 SEPT14P8-201ENST00000508026 178 ntBASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-1046P-201ENST00000516538 107 ntBASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.713-201ENST00000517013 96 ntBASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 AC040926.1-201ENST00000530195 238 ntBASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 SNORD113-5-201ENST00000607261 78 ntBASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 PART1_1.1-201ENST00000611761 217 ntBASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 MIR6513-201ENST00000621188 64 ntBASIC0.36□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.70-201ENST00000362886 110 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-1283P-201ENST00000365314 105 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 RNU1-115P-201ENST00000365329 160 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.508-201ENST00000384502 114 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.526-201ENST00000384572 110 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.547-201ENST00000384654 119 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 MIR573-201ENST00000384964 99 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-1248P-201ENST00000391096 64 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-383P-201ENST00000410864 94 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 AC090844.1-201ENST00000422019 156 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 AC236972.2-201ENST00000434979 310 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 AC092628.1-201ENST00000436250 252 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 RNU7-67P-201ENST00000459003 62 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 AL162730.1-201ENST00000605734 292 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 uc_338.4-201ENST00000616635 176 ntBASIC0.35□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.494-201ENST00000384432 111 ntBASIC0.34□□□□□ -2.36
TRAV39A0A0B4J263 MIR548O-201ENST00000408583 114 ntBASIC0.34□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.602-201ENST00000410535 92 ntBASIC0.34□□□□□ -2.36
TRAV39A0A0B4J263 MTCO2P12-201ENST00000427426 682 ntBASIC0.34□□□□□ -2.36
TRAV39A0A0B4J263 AC107297.1-201ENST00000459991 176 ntBASIC0.34□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-976P-201ENST00000516086 111 ntBASIC0.34□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-875P-201ENST00000516488 106 ntBASIC0.34□□□□□ -2.36
TRAV39A0A0B4J263 AL512605.2-201ENST00000592972 256 ntBASIC0.34□□□□□ -2.36
TRAV39A0A0B4J263 MIR377-201ENST00000362145 69 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 SNORD113-8-201ENST00000363497 74 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-1205P-201ENST00000363625 106 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-899P-201ENST00000363947 107 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.241-201ENST00000364470 117 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.242-201ENST00000364473 110 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.418-201ENST00000384029 102 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 MT-TN-201ENST00000387400 73 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-763P-201ENST00000390865 106 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-177P-201ENST00000411257 104 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 AC244023.1-201ENST00000426884 112 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 AC023449.1-201ENST00000454464 154 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 RNU2-13P-201ENST00000515909 113 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 RNA5SP436-201ENST00000516020 115 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-507P-201ENST00000516045 100 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-397P-201ENST00000516226 104 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-191P-201ENST00000516295 94 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 RNU7-149P-201ENST00000516739 59 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 AL049861.1-201ENST00000603130 150 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 AC242498.1-201ENST00000604134 111 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 LARP7P1-201ENST00000605576 316 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 AC022709.1-201ENST00000615967 87 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 AC007485.1-201ENST00000616755 206 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 AC134878.1-201ENST00000619901 243 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 AL589743.1-201ENST00000551932 2712 ntBASIC0.33□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.303-201ENST00000364998 94 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.315-201ENST00000365117 102 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-580P-201ENST00000365159 107 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 MIR598-201ENST00000384868 97 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.579-201ENST00000390939 94 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 RNU7-62P-201ENST00000458856 62 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-1132P-201ENST00000459214 107 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms