Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 NDUFA4P2-201ENST00000489989 244 ntBASIC1.59□□□□□ -2.15
CLDN16Q9Y5I7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.59□□□□□ -2.15
CLDN16Q9Y5I7 AC015712.3-201ENST00000559380 164 ntBASIC1.59□□□□□ -2.15
CLDN16Q9Y5I7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.59□□□□□ -2.15
CLDN16Q9Y5I7 AP001485.1-201ENST00000604799 199 ntBASIC1.59□□□□□ -2.15
CLDN16Q9Y5I7 uc_338.4-201ENST00000616635 176 ntBASIC1.59□□□□□ -2.15
CLDN16Q9Y5I7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
CLDN16Q9Y5I7 WWP1P1-201ENST00000466609 2769 ntBASIC1.59□□□□□ -2.15
CLDN16Q9Y5I7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CLDN16Q9Y5I7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CLDN16Q9Y5I7 RNU6-653P-201ENST00000363074 106 ntBASIC1.58□□□□□ -2.16
CLDN16Q9Y5I7 RNU6-833P-201ENST00000363486 107 ntBASIC1.58□□□□□ -2.16
CLDN16Q9Y5I7 RNU6-923P-201ENST00000364753 107 ntBASIC1.58□□□□□ -2.16
CLDN16Q9Y5I7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
CLDN16Q9Y5I7 RNU6-493P-201ENST00000391321 108 ntBASIC1.58□□□□□ -2.16
CLDN16Q9Y5I7 HMGN2P32-201ENST00000444648 269 ntBASIC1.58□□□□□ -2.16
CLDN16Q9Y5I7 SNORD11-201ENST00000459124 84 ntBASIC1.58□□□□□ -2.16
CLDN16Q9Y5I7 AC019176.1-201ENST00000518519 225 ntBASIC1.58□□□□□ -2.16
CLDN16Q9Y5I7 AC011921.3-201ENST00000605540 361 ntBASIC1.58□□□□□ -2.16
CLDN16Q9Y5I7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 Y_RNA.83-201ENST00000363005 113 ntBASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 RNU6-457P-201ENST00000363999 107 ntBASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 Y_RNA.200-201ENST00000364018 102 ntBASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 Y_RNA.242-201ENST00000364473 110 ntBASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 RN7SKP101-201ENST00000411376 320 ntBASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 COX6CP14-201ENST00000469580 174 ntBASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 AC079140.2-201ENST00000506193 142 ntBASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 AC015688.6-201ENST00000577737 104 ntBASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 MIR3937-201ENST00000580135 106 ntBASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 AC104984.5-201ENST00000586878 94 ntBASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 AC141273.2-201ENST00000618989 130 ntBASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLDN16Q9Y5I7 SNORD33-201ENST00000362761 85 ntBASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 SNORD1A-201ENST00000364968 72 ntBASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 RNU6-442P-201ENST00000383968 104 ntBASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 MIR452-201ENST00000385020 85 ntBASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 MT-TT-201ENST00000387460 66 ntBASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 RNU1-98P-201ENST00000458992 160 ntBASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 RNU7-149P-201ENST00000516739 59 ntBASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 MIR3618-201ENST00000580330 88 ntBASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 AC008507.4-201ENST00000585464 127 ntBASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 Pinc.1-201ENST00000616452 154 ntBASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.56□□□□□ -2.16
CLDN16Q9Y5I7 RNU1-17P-201ENST00000363022 152 ntBASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 snoU2_19.4-201ENST00000364329 80 ntBASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 Y_RNA.336-201ENST00000365307 109 ntBASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 SNORD72-201ENST00000390994 80 ntBASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 SNORA17.3-201ENST00000391159 129 ntBASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 RNU1-78P-201ENST00000391248 165 ntBASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 SNORD13-201ENST00000459299 104 ntBASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 RN7SKP164-201ENST00000516138 266 ntBASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 AC009779.6-201ENST00000603972 165 ntBASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
CLDN16Q9Y5I7 RNY1-201ENST00000364228 113 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 RNA5SP190-201ENST00000365222 118 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 MIR516B2-201ENST00000385190 85 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 MIR616-201ENST00000385293 97 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 RNU6-381P-201ENST00000391259 108 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 AL606845.1-201ENST00000404881 255 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 Y_RNA.622-201ENST00000411091 108 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 SNX2P2-201ENST00000424553 323 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 RNU6-322P-201ENST00000516010 103 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 SNORA25.15-201ENST00000516487 89 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 RNU6-453P-201ENST00000516819 85 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 RNU6-548P-201ENST00000517083 115 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 AC130289.1-201ENST00000577321 73 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 FAM106DP-201ENST00000586416 501 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 AL365434.2-201ENST00000607979 234 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 AL021707.8-201ENST00000609428 183 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
CLDN16Q9Y5I7 SNORD38C-201ENST00000384381 69 ntBASIC1.53□□□□□ -2.16
CLDN16Q9Y5I7 AC092991.1-201ENST00000477176 376 ntBASIC1.53□□□□□ -2.16
CLDN16Q9Y5I7 AC108210.2-201ENST00000503681 201 ntBASIC1.53□□□□□ -2.16
CLDN16Q9Y5I7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.53□□□□□ -2.16
CLDN16Q9Y5I7 SCARNA8-201ENST00000515924 131 ntBASIC1.53□□□□□ -2.16
CLDN16Q9Y5I7 AC024614.2-201ENST00000577584 372 ntBASIC1.53□□□□□ -2.16
CLDN16Q9Y5I7 MIR4524B-201ENST00000581569 115 ntBASIC1.53□□□□□ -2.16
CLDN16Q9Y5I7 RNU2-4P-201ENST00000606190 192 ntBASIC1.53□□□□□ -2.16
CLDN16Q9Y5I7 MIR411-201ENST00000362239 96 ntBASIC1.52□□□□□ -2.17
CLDN16Q9Y5I7 Y_RNA.7-201ENST00000362352 102 ntBASIC1.52□□□□□ -2.17
CLDN16Q9Y5I7 RNU6-103P-201ENST00000363686 107 ntBASIC1.52□□□□□ -2.17
CLDN16Q9Y5I7 SNORA2.2-201ENST00000365473 135 ntBASIC1.52□□□□□ -2.17
CLDN16Q9Y5I7 MIR136-201ENST00000385207 82 ntBASIC1.52□□□□□ -2.17
CLDN16Q9Y5I7 RNU6-1228P-201ENST00000391014 107 ntBASIC1.52□□□□□ -2.17
CLDN16Q9Y5I7 AC015922.2-201ENST00000435593 184 ntBASIC1.52□□□□□ -2.17
CLDN16Q9Y5I7 AC245517.4-201ENST00000448601 281 ntBASIC1.52□□□□□ -2.17
CLDN16Q9Y5I7 RNA5SP445-201ENST00000515889 115 ntBASIC1.52□□□□□ -2.17
CLDN16Q9Y5I7 Y_RNA.797-201ENST00000515977 94 ntBASIC1.52□□□□□ -2.17
CLDN16Q9Y5I7 SNORD77.4-201ENST00000516158 81 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms