Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNU2-11P-201ENST00000459191 187 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 AC091153.1-201ENST00000466297 402 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-158P-201ENST00000517104 100 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 AL442644.1-201ENST00000454390 3105 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 Y_RNA.370-201ENST00000365589 108 ntBASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU1-109P-201ENST00000383960 147 ntBASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 Y_RNA.558-201ENST00000384685 113 ntBASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 SNORD15B-201ENST00000384714 146 ntBASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-904P-201ENST00000516206 101 ntBASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 AC004812.1-201ENST00000540773 146 ntBASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 FAM71BP1-201ENST00000604431 523 ntBASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 YPEL5P2-201ENST00000605553 359 ntBASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR622-201ENST00000638396 96 ntBASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHGA11Q9Y5H2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 SNORD56.5-201ENST00000364281 72 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 SNORD73B-201ENST00000364394 72 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 RNA5SP72-201ENST00000364442 117 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 SNORA7.4-201ENST00000384249 137 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 Y_RNA.531-201ENST00000384589 121 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 RNA5SP261-201ENST00000410536 106 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 RN7SKP27-201ENST00000410684 333 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 Z92545.1-201ENST00000411782 234 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 AC005326.1-201ENST00000429197 123 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 RN7SL863P-201ENST00000462370 296 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-109P-201ENST00000516364 107 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-184P-201ENST00000516514 107 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR4444-1-201ENST00000581696 74 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR4444-2-201ENST00000584390 74 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR6075-201ENST00000620782 95 ntBASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3□□□□□ -1.93
PCDHGA11Q9Y5H2 AC093010.3-201ENST00000570269 15214 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-661P-201ENST00000362409 107 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 Y_RNA.220-201ENST00000364244 109 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 Y_RNA.494-201ENST00000384432 111 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 RNA5SP274-201ENST00000410484 108 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 RPS3AP1-201ENST00000413190 320 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 HMGN2P3-201ENST00000433603 273 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 HMGN2P5-201ENST00000436882 273 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 RPS23P4-201ENST00000487908 423 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU7-53P-201ENST00000516705 60 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 DEFB131E-201ENST00000532329 154 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR5680-201ENST00000577577 84 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR6733-201ENST00000635723 61 ntBASIC2.99□□□□□ -1.93
PCDHGA11Q9Y5H2 AC007336.1-201ENST00000576365 3828 ntBASIC2.98□□□□□ -1.93
PCDHGA11Q9Y5H2 Y_RNA.93-201ENST00000363066 109 ntBASIC2.98□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR518A2-201ENST00000384966 87 ntBASIC2.98□□□□□ -1.93
PCDHGA11Q9Y5H2 SNORA48.7-201ENST00000391302 135 ntBASIC2.98□□□□□ -1.93
PCDHGA11Q9Y5H2 AL512326.2-201ENST00000426359 151 ntBASIC2.98□□□□□ -1.93
PCDHGA11Q9Y5H2 MTATP8P2-201ENST00000435212 202 ntBASIC2.98□□□□□ -1.93
PCDHGA11Q9Y5H2 PRSS3P4-201ENST00000453323 162 ntBASIC2.98□□□□□ -1.93
PCDHGA11Q9Y5H2 RPPH1-2P-201ENST00000516688 293 ntBASIC2.98□□□□□ -1.93
PCDHGA11Q9Y5H2 RNA5SP481-201ENST00000516814 122 ntBASIC2.98□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR1254-2-201ENST00000579553 63 ntBASIC2.98□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR4429-201ENST00000580105 73 ntBASIC2.98□□□□□ -1.93
PCDHGA11Q9Y5H2 AC012314.7-201ENST00000619693 93 ntBASIC2.98□□□□□ -1.93
PCDHGA11Q9Y5H2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 AC092881.1-201ENST00000638218 2733 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 Y_RNA.10-201ENST00000362371 110 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 SNORA4.2-201ENST00000365313 147 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR516B2-201ENST00000385190 85 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-1319P-201ENST00000390855 104 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 SNORA48.1-201ENST00000390879 135 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-747P-201ENST00000390928 104 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-241P-201ENST00000391148 104 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR1283-2-201ENST00000408621 87 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 SNORA19.1-201ENST00000410656 129 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 RNA5SP120-201ENST00000410900 112 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-177P-201ENST00000411257 104 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 AL135938.1-201ENST00000443141 297 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU7-67P-201ENST00000459003 62 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 AC006023.1-201ENST00000603944 259 ntBASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PCDHGA11Q9Y5H2 SNORA71.3-201ENST00000362582 128 ntBASIC2.96□□□□□ -1.94
PCDHGA11Q9Y5H2 RNU6-1067P-201ENST00000384752 107 ntBASIC2.96□□□□□ -1.94
PCDHGA11Q9Y5H2 MIR670-201ENST00000390142 98 ntBASIC2.96□□□□□ -1.94
PCDHGA11Q9Y5H2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PCDHGA11Q9Y5H2 RNU7-113P-201ENST00000459273 62 ntBASIC2.96□□□□□ -1.94
PCDHGA11Q9Y5H2 RNU7-34P-201ENST00000459394 64 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms