Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA4Q9Y5G9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA4Q9Y5G9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 MIR30B-201ENST00000384850 88 ntBASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 MIR452-201ENST00000385020 85 ntBASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 MIR136-201ENST00000385207 82 ntBASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 U8.16-201ENST00000391279 133 ntBASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 U3.44-201ENST00000458938 192 ntBASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 SNORD4B-201ENST00000459083 72 ntBASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 SEM1P1-201ENST00000506694 209 ntBASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 CYCSP30-201ENST00000546447 172 ntBASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 YPEL5P3-201ENST00000547227 352 ntBASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 AC105081.1-201ENST00000617727 106 ntBASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.8□□□□□ -1.8
PCDHGA4Q9Y5G9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 SNORA63.2-201ENST00000362603 126 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 RNA5SP133-201ENST00000363368 119 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 SNORA5A-201ENST00000384111 134 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 SNORA11.4-201ENST00000408823 129 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 AC006483.1-201ENST00000487308 313 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 RN7SL323P-201ENST00000494712 295 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 AC023141.11-201ENST00000508864 202 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 RNU7-79P-201ENST00000516082 62 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 SCARNA13-201ENST00000516672 275 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 RNA5SP179-201ENST00000517284 121 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 MIR4474-201ENST00000579189 78 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 AC091167.4-201ENST00000605079 184 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 MIR7153-201ENST00000637758 57 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 AP000648.3-201ENST00000623539 4507 ntBASIC3.79□□□□□ -1.8
PCDHGA4Q9Y5G9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 MIR491-201ENST00000384877 84 ntBASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 HMGN1P33-201ENST00000432945 451 ntBASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 RNU1-95P-201ENST00000516357 160 ntBASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 SNORA74D-201ENST00000516404 141 ntBASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 SNORA31.10-201ENST00000516482 106 ntBASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 RNU1-128P-201ENST00000516704 160 ntBASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 RNU7-137P-201ENST00000516788 62 ntBASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 RNU6-448P-201ENST00000517052 107 ntBASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PCDHGA4Q9Y5G9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 RNA5SP493-201ENST00000364115 91 ntBASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 Y_RNA.354-201ENST00000365448 111 ntBASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 MIR34B-201ENST00000385076 84 ntBASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 SNORA26.7-201ENST00000391288 122 ntBASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 AL034345.1-201ENST00000407768 123 ntBASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 RNU7-12P-201ENST00000516030 62 ntBASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 SNORA70.24-201ENST00000517233 118 ntBASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 RNU6-711P-201ENST00000517255 106 ntBASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 MIR5195-201ENST00000583555 115 ntBASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 AL591424.2-201ENST00000617023 128 ntBASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 AP001362.1-201ENST00000625165 124 ntBASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA4Q9Y5G9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PCDHGA4Q9Y5G9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA4Q9Y5G9 RNA5SP139-201ENST00000364340 117 ntBASIC3.76□□□□□ -1.81
PCDHGA4Q9Y5G9 SNORA25B-201ENST00000365507 128 ntBASIC3.76□□□□□ -1.81
PCDHGA4Q9Y5G9 RNU6-987P-201ENST00000384759 104 ntBASIC3.76□□□□□ -1.81
PCDHGA4Q9Y5G9 RNU2-59P-201ENST00000410482 191 ntBASIC3.76□□□□□ -1.81
PCDHGA4Q9Y5G9 Y_RNA.660-201ENST00000516002 120 ntBASIC3.76□□□□□ -1.81
PCDHGA4Q9Y5G9 RNA5SP168-201ENST00000516642 112 ntBASIC3.76□□□□□ -1.81
PCDHGA4Q9Y5G9 AC087499.8-201ENST00000578406 226 ntBASIC3.76□□□□□ -1.81
PCDHGA4Q9Y5G9 MIR548AR-201ENST00000582191 57 ntBASIC3.76□□□□□ -1.81
PCDHGA4Q9Y5G9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA4Q9Y5G9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA4Q9Y5G9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
PCDHGA4Q9Y5G9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHGA4Q9Y5G9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA4Q9Y5G9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PCDHGA4Q9Y5G9 Y_RNA.205-201ENST00000364128 113 ntBASIC3.75□□□□□ -1.81
PCDHGA4Q9Y5G9 Y_RNA.386-201ENST00000383913 105 ntBASIC3.75□□□□□ -1.81
PCDHGA4Q9Y5G9 SNORA11.2-201ENST00000408318 127 ntBASIC3.75□□□□□ -1.81
PCDHGA4Q9Y5G9 RNU6-634P-201ENST00000459134 106 ntBASIC3.75□□□□□ -1.81
PCDHGA4Q9Y5G9 MIR3200-201ENST00000580767 85 ntBASIC3.75□□□□□ -1.81
PCDHGA4Q9Y5G9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.75□□□□□ -1.81
PCDHGA4Q9Y5G9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA4Q9Y5G9 SNORA25.9-201ENST00000365087 128 ntBASIC3.74□□□□□ -1.81
PCDHGA4Q9Y5G9 Y_RNA.508-201ENST00000384502 114 ntBASIC3.74□□□□□ -1.81
PCDHGA4Q9Y5G9 SNORD28B-201ENST00000390993 75 ntBASIC3.74□□□□□ -1.81
PCDHGA4Q9Y5G9 MIR1262-201ENST00000408276 93 ntBASIC3.74□□□□□ -1.81
PCDHGA4Q9Y5G9 Y_RNA.681-201ENST00000516445 113 ntBASIC3.74□□□□□ -1.81
PCDHGA4Q9Y5G9 RNA5SP380-201ENST00000517190 98 ntBASIC3.74□□□□□ -1.81
PCDHGA4Q9Y5G9 MIR4425-201ENST00000580572 84 ntBASIC3.74□□□□□ -1.81
PCDHGA4Q9Y5G9 MIR4796-201ENST00000580742 81 ntBASIC3.74□□□□□ -1.81
PCDHGA4Q9Y5G9 MIR8055-201ENST00000610739 97 ntBASIC3.74□□□□□ -1.81
PCDHGA4Q9Y5G9 MIR8066-201ENST00000617280 78 ntBASIC3.74□□□□□ -1.81
PCDHGA4Q9Y5G9 MIR8065-201ENST00000620577 100 ntBASIC3.74□□□□□ -1.81
PCDHGA4Q9Y5G9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 251.6 ms