Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 Y_RNA.275-201ENST00000364726 110 ntBASIC1.42□□□□□ -2.18
PCDHGB3Q9Y5G1 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
PCDHGB3Q9Y5G1 Y_RNA.293-201ENST00000364908 93 ntBASIC1.42□□□□□ -2.18
PCDHGB3Q9Y5G1 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
PCDHGB3Q9Y5G1 NDUFA4P2-201ENST00000489989 244 ntBASIC1.42□□□□□ -2.18
PCDHGB3Q9Y5G1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.42□□□□□ -2.18
PCDHGB3Q9Y5G1 SNORA31.2-201ENST00000516019 134 ntBASIC1.42□□□□□ -2.18
PCDHGB3Q9Y5G1 SNORD116-28-201ENST00000516123 91 ntBASIC1.42□□□□□ -2.18
PCDHGB3Q9Y5G1 SCARNA24.2-201ENST00000516968 130 ntBASIC1.42□□□□□ -2.18
PCDHGB3Q9Y5G1 DEFB108E-201ENST00000524692 240 ntBASIC1.42□□□□□ -2.18
PCDHGB3Q9Y5G1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 RNA5SP327-201ENST00000362494 101 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 Y_RNA.574-201ENST00000384766 95 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 MIR222-201ENST00000384992 110 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 MIR526A2-201ENST00000390198 65 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 RNU4-62P-201ENST00000410125 130 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 AC008737.2-201ENST00000599446 118 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 AL022345.2-201ENST00000606307 135 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 MIR8062-201ENST00000621515 85 ntBASIC1.41□□□□□ -2.18
PCDHGB3Q9Y5G1 Y_RNA.4-201ENST00000362333 112 ntBASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 RNA5SP48-201ENST00000363969 126 ntBASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 SNORA63C-201ENST00000364578 129 ntBASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 Y_RNA.370-201ENST00000365589 108 ntBASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 RNU6-738P-201ENST00000384531 106 ntBASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 AL117187.1-201ENST00000555482 181 ntBASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 MIR4303-201ENST00000581299 66 ntBASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 BX284668.6-201ENST00000606899 438 ntBASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 Y_RNA.802-201ENST00000614892 130 ntBASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 U2.14-201ENST00000615943 113 ntBASIC1.4□□□□□ -2.19
PCDHGB3Q9Y5G1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 Y_RNA.149-201ENST00000363558 117 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 Y_RNA.376-201ENST00000365638 108 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 Y_RNA.461-201ENST00000384263 103 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 SNORA80D-201ENST00000384488 135 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 MIR520C-201ENST00000385005 87 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 MIR548F4-201ENST00000408515 105 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 MTATP8P1-201ENST00000467115 207 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 Y_RNA.673-201ENST00000516306 88 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 MIR4662B-201ENST00000579498 81 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 AC006006.1-201ENST00000603082 144 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 AC006441.5-201ENST00000612680 209 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 AP001282.2-201ENST00000616149 309 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 AC027335.2-201ENST00000624030 375 ntBASIC1.39□□□□□ -2.19
PCDHGB3Q9Y5G1 MIR337-201ENST00000362281 93 ntBASIC1.38□□□□□ -2.19
PCDHGB3Q9Y5G1 RNY1P10-201ENST00000363268 113 ntBASIC1.38□□□□□ -2.19
PCDHGB3Q9Y5G1 RNU6-238P-201ENST00000363313 106 ntBASIC1.38□□□□□ -2.19
PCDHGB3Q9Y5G1 RNU1-124P-201ENST00000363861 145 ntBASIC1.38□□□□□ -2.19
PCDHGB3Q9Y5G1 MIR1278-201ENST00000408753 81 ntBASIC1.38□□□□□ -2.19
PCDHGB3Q9Y5G1 RNU7-95P-201ENST00000459222 64 ntBASIC1.38□□□□□ -2.19
PCDHGB3Q9Y5G1 RNU7-40P-201ENST00000516397 64 ntBASIC1.38□□□□□ -2.19
PCDHGB3Q9Y5G1 SNORA18.7-201ENST00000516910 131 ntBASIC1.38□□□□□ -2.19
PCDHGB3Q9Y5G1 AL008718.3-201ENST00000610217 321 ntBASIC1.38□□□□□ -2.19
PCDHGB3Q9Y5G1 uc_338.4-201ENST00000616635 176 ntBASIC1.38□□□□□ -2.19
PCDHGB3Q9Y5G1 snoU18.1-201ENST00000629629 71 ntBASIC1.38□□□□□ -2.19
PCDHGB3Q9Y5G1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
PCDHGB3Q9Y5G1 Y_RNA.237-201ENST00000364439 102 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 Y_RNA.459-201ENST00000384251 102 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 RNU6-1289P-201ENST00000384431 106 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 SNORA8.3-201ENST00000384679 139 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 AC245047.8-201ENST00000456455 284 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 SNORD123-201ENST00000459473 70 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 AC048334.1-201ENST00000477975 159 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 RPS23P4-201ENST00000487908 423 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 AC136443.5-201ENST00000603741 370 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 AL359821.1-201ENST00000605519 182 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 AL021707.8-201ENST00000609428 183 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 AL391903.3-201ENST00000612158 163 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 Pinc.1-201ENST00000616452 154 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.37□□□□□ -2.19
PCDHGB3Q9Y5G1 U8.1-201ENST00000362843 134 ntBASIC1.36□□□□□ -2.19
PCDHGB3Q9Y5G1 RNU6-268P-201ENST00000364174 107 ntBASIC1.36□□□□□ -2.19
PCDHGB3Q9Y5G1 SNORA1.2-201ENST00000365189 134 ntBASIC1.36□□□□□ -2.19
PCDHGB3Q9Y5G1 MIR19B1-201ENST00000384829 87 ntBASIC1.36□□□□□ -2.19
PCDHGB3Q9Y5G1 SNRPGP14-201ENST00000435400 219 ntBASIC1.36□□□□□ -2.19
PCDHGB3Q9Y5G1 SNRPGP13-201ENST00000442212 177 ntBASIC1.36□□□□□ -2.19
PCDHGB3Q9Y5G1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.36□□□□□ -2.19
PCDHGB3Q9Y5G1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.36□□□□□ -2.19
PCDHGB3Q9Y5G1 MIR4764-201ENST00000580680 88 ntBASIC1.36□□□□□ -2.19
PCDHGB3Q9Y5G1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.36□□□□□ -2.19
PCDHGB3Q9Y5G1 AL096861.1-201ENST00000610899 123 ntBASIC1.36□□□□□ -2.19
PCDHGB3Q9Y5G1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.36□□□□□ -2.19
PCDHGB3Q9Y5G1 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
PCDHGB3Q9Y5G1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
PCDHGB3Q9Y5G1 RNU6-1138P-201ENST00000365359 106 ntBASIC1.35□□□□□ -2.19
PCDHGB3Q9Y5G1 RNU6-211P-201ENST00000384047 107 ntBASIC1.35□□□□□ -2.19
PCDHGB3Q9Y5G1 Y_RNA.518-201ENST00000384552 113 ntBASIC1.35□□□□□ -2.19
PCDHGB3Q9Y5G1 RNU6-910P-201ENST00000390844 107 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms