Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 Y_RNA.692-201ENST00000516627 105 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 RNU7-149P-201ENST00000516739 59 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 AL365205.2-201ENST00000594586 68 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 AC073413.2-201ENST00000604332 360 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 JPX_2.1-201ENST00000614161 69 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
PTPN22Q9Y2R2 RNU6-1325P-201ENST00000364905 105 ntBASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 AL603914.1-201ENST00000401964 204 ntBASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 AL158823.1-201ENST00000418441 478 ntBASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 AL445646.1-201ENST00000431784 216 ntBASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 RNU7-193P-201ENST00000516723 65 ntBASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 AL359075.3-201ENST00000613288 217 ntBASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 Pinc.1-201ENST00000616452 154 ntBASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 MIR8070-201ENST00000616510 88 ntBASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 MIR338-201ENST00000636369 67 ntBASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 FO624990.1-201ENST00000636373 85 ntBASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PTPN22Q9Y2R2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
PTPN22Q9Y2R2 Y_RNA.66-201ENST00000362862 102 ntBASIC2.51□□□□□ -2.01
PTPN22Q9Y2R2 RNA5SP493-201ENST00000364115 91 ntBASIC2.51□□□□□ -2.01
PTPN22Q9Y2R2 Y_RNA.242-201ENST00000364473 110 ntBASIC2.51□□□□□ -2.01
PTPN22Q9Y2R2 MIR624-201ENST00000385217 97 ntBASIC2.51□□□□□ -2.01
PTPN22Q9Y2R2 SNORA17.3-201ENST00000391159 129 ntBASIC2.51□□□□□ -2.01
PTPN22Q9Y2R2 HMGN1P7-201ENST00000491722 313 ntBASIC2.51□□□□□ -2.01
PTPN22Q9Y2R2 RNU6-341P-201ENST00000516973 96 ntBASIC2.51□□□□□ -2.01
PTPN22Q9Y2R2 MIR3121-201ENST00000579680 77 ntBASIC2.51□□□□□ -2.01
PTPN22Q9Y2R2 AC087685.1-201ENST00000587507 141 ntBASIC2.51□□□□□ -2.01
PTPN22Q9Y2R2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 U8.1-201ENST00000362843 134 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 RNU6-1164P-201ENST00000364428 107 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 RNU6-1336P-201ENST00000383886 109 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 MIR515-2-201ENST00000384883 83 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 MIR515-1-201ENST00000384884 83 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 BX510359.4-201ENST00000423750 193 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 AL158147.1-201ENST00000443970 75 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 ATP5J2P3-201ENST00000451550 258 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 RNU7-107P-201ENST00000459121 61 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 NDUFA4P2-201ENST00000489989 244 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 RNU6-365P-201ENST00000517113 106 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 MIR3914-2-201ENST00000637339 95 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 U6.108-201ENST00000637764 58 ntBASIC2.5□□□□□ -2.01
PTPN22Q9Y2R2 Y_RNA.486-201ENST00000384398 107 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 MIR583-201ENST00000384846 75 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 SNORD23.1-201ENST00000408212 104 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 RNU6-1064P-201ENST00000410626 104 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 RPS26P45-201ENST00000471748 340 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 RNU6-504P-201ENST00000516568 104 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 SNORA31.25-201ENST00000517242 134 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 AC024995.1-201ENST00000523014 93 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 MIR4446-201ENST00000578505 67 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 AC005786.1-201ENST00000588553 154 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 U1.36-201ENST00000620684 176 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 MIR6079-201ENST00000635807 62 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 U6.95-201ENST00000636931 70 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 ZNF355P-201ENST00000427301 3216 ntBASIC2.49□□□□□ -2.01
PTPN22Q9Y2R2 MIR378A-201ENST00000362177 66 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 SNORD114-6-201ENST00000364393 72 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 Y_RNA.253-201ENST00000364562 112 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 RNU6-44P-201ENST00000384045 107 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 RNU6-1144P-201ENST00000384247 104 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 RNU6-476P-201ENST00000384726 107 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 MIR891A-201ENST00000401237 79 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 AL117342.1-201ENST00000404861 406 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 RNU6-1186P-201ENST00000410429 97 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 RNA5SP127-201ENST00000411051 133 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 RNA5SP200-201ENST00000516360 103 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 RNU2-60P-201ENST00000517290 128 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 AC007751.1-201ENST00000529260 376 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 AL049779.4-201ENST00000604500 156 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 MIR6766-201ENST00000622641 72 ntBASIC2.48□□□□□ -2.01
PTPN22Q9Y2R2 AC007336.1-201ENST00000576365 3828 ntBASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 SNORD18B-201ENST00000365659 72 ntBASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 RNU6-1292P-201ENST00000383856 107 ntBASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 SNORD24-201ENST00000383884 75 ntBASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 RNU1-138P-201ENST00000384093 164 ntBASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 MIR518E-201ENST00000385252 88 ntBASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 RNU7-94P-201ENST00000459576 63 ntBASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 RNU6-772P-201ENST00000516042 105 ntBASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 RNU1-142P-201ENST00000516682 145 ntBASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 AC008507.4-201ENST00000585464 127 ntBASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PTPN22Q9Y2R2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
PTPN22Q9Y2R2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
PTPN22Q9Y2R2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
PTPN22Q9Y2R2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PTPN22Q9Y2R2 Y_RNA.116-201ENST00000363292 103 ntBASIC2.46□□□□□ -2.02
PTPN22Q9Y2R2 Y_RNA.294-201ENST00000364916 102 ntBASIC2.46□□□□□ -2.02
PTPN22Q9Y2R2 CST2P1-201ENST00000425770 87 ntBASIC2.46□□□□□ -2.02
PTPN22Q9Y2R2 SNRPGP10-201ENST00000432323 225 ntBASIC2.46□□□□□ -2.02
PTPN22Q9Y2R2 MRPS17P9-201ENST00000511924 393 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 221.9 ms