Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 MIR376A1-201ENST00000616574 68 ntBASIC0.68□□□□□ -2.3
TRAPPC4Q9Y296 SEPT14P17-201ENST00000617978 177 ntBASIC0.68□□□□□ -2.3
TRAPPC4Q9Y296 AC090574.1-201ENST00000623186 233 ntBASIC0.68□□□□□ -2.3
TRAPPC4Q9Y296 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 MIR103A2-201ENST00000362154 78 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 Y_RNA.28-201ENST00000362554 111 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 RNU6-442P-201ENST00000383968 104 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 SNORD38C-201ENST00000384381 69 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 RNU6-102P-201ENST00000384485 104 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 SNORD115-46-201ENST00000390982 71 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 RNU6-823P-201ENST00000391042 103 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 SNORA26.5-201ENST00000391215 123 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 AC006461.1-201ENST00000412637 326 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 HSPE1P25-201ENST00000455484 251 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 PDCD5P2-201ENST00000507570 312 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 RNU6-496P-201ENST00000516145 99 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 AC104695.3-201ENST00000604052 296 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 AC124312.5-201ENST00000604451 268 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 RAC1P9-201ENST00000604990 392 ntBASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAPPC4Q9Y296 SNORD113-8-201ENST00000363497 74 ntBASIC0.66□□□□□ -2.3
TRAPPC4Q9Y296 Y_RNA.191-201ENST00000363972 113 ntBASIC0.66□□□□□ -2.3
TRAPPC4Q9Y296 RNU6-268P-201ENST00000364174 107 ntBASIC0.66□□□□□ -2.3
TRAPPC4Q9Y296 MIR100-201ENST00000385259 80 ntBASIC0.66□□□□□ -2.3
TRAPPC4Q9Y296 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
TRAPPC4Q9Y296 MIR1252-201ENST00000408861 65 ntBASIC0.66□□□□□ -2.3
TRAPPC4Q9Y296 SNORD11-201ENST00000459124 84 ntBASIC0.66□□□□□ -2.3
TRAPPC4Q9Y296 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAPPC4Q9Y296 AL160413.1-201ENST00000622780 310 ntBASIC0.66□□□□□ -2.3
TRAPPC4Q9Y296 AC008133.2-201ENST00000624540 351 ntBASIC0.66□□□□□ -2.3
TRAPPC4Q9Y296 AC134026.1-201ENST00000623249 2239 ntBASIC0.65□□□□□ -2.3
TRAPPC4Q9Y296 SNORA25.3-201ENST00000363205 127 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 RNU6-474P-201ENST00000384243 107 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 MIR520E-201ENST00000384867 87 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 MIR605-201ENST00000385078 83 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 MIR942-201ENST00000401111 86 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 AL603910.2-201ENST00000407268 136 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 MIR1302-7-201ENST00000408841 72 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 AL392103.1-201ENST00000447000 198 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 RNU6-397P-201ENST00000516226 104 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 RNA5SP255-201ENST00000516370 107 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 RNU11-2P-201ENST00000516898 142 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 RNU6-897P-201ENST00000517135 105 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 RPL23AP91-201ENST00000569211 455 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 MIR4452-201ENST00000583004 71 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 AC131055.1-201ENST00000584626 316 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 MTND4P29-201ENST00000503122 1372 ntBASIC0.65□□□□□ -2.31
TRAPPC4Q9Y296 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 RNU4-90P-201ENST00000362773 141 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 RNU6-899P-201ENST00000363947 107 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 MIR499A-201ENST00000384903 122 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 SNORD28B-201ENST00000390993 75 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.581-201ENST00000391017 97 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 MIR1278-201ENST00000408753 81 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.631-201ENST00000459607 101 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 RNU6-764P-201ENST00000516396 105 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 RNU6-197P-201ENST00000516680 100 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.721-201ENST00000517207 102 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 CYP3A137P-201ENST00000562436 69 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 MIR548AR-201ENST00000582191 57 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 AC006441.5-201ENST00000612680 209 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 Pinc.1-201ENST00000616452 154 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 MIR4251-201ENST00000635819 61 ntBASIC0.64□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.105-201ENST00000363182 111 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.242-201ENST00000364473 110 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 RNU6-450P-201ENST00000364654 107 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.330-201ENST00000365230 109 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.370-201ENST00000365589 108 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.380-201ENST00000365663 111 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.460-201ENST00000384255 102 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 MIR802-201ENST00000390235 94 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 RNU6-763P-201ENST00000390865 106 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 SNORD72-201ENST00000390994 80 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 RNU6-101P-201ENST00000410323 104 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 RNU6-121P-201ENST00000410525 99 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.602-201ENST00000410535 92 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 MTCO1P5-201ENST00000433573 344 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 FABP5P4-201ENST00000437203 171 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 RNU6-1007P-201ENST00000516586 107 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 AC109810.1-201ENST00000534066 224 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.128-201ENST00000363391 112 ntBASIC0.62□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.394-201ENST00000383942 103 ntBASIC0.62□□□□□ -2.31
TRAPPC4Q9Y296 RNU6-144P-201ENST00000383951 107 ntBASIC0.62□□□□□ -2.31
TRAPPC4Q9Y296 Y_RNA.569-201ENST00000384749 103 ntBASIC0.62□□□□□ -2.31
TRAPPC4Q9Y296 MIR608-201ENST00000384820 100 ntBASIC0.62□□□□□ -2.31
TRAPPC4Q9Y296 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
TRAPPC4Q9Y296 U8.17-201ENST00000391292 132 ntBASIC0.62□□□□□ -2.31
TRAPPC4Q9Y296 MTCO2P33-201ENST00000402100 465 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms