Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 RNA5SP289-201ENST00000362332 137 ntBASIC1.98□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU6-833P-201ENST00000363486 107 ntBASIC1.98□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU6-203P-201ENST00000384038 104 ntBASIC1.98□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU6-804P-201ENST00000384286 107 ntBASIC1.98□□□□□ -2.09
NIPSNAP3AQ9UFN0 Y_RNA.521-201ENST00000384560 114 ntBASIC1.98□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU6-239P-201ENST00000390990 99 ntBASIC1.98□□□□□ -2.09
NIPSNAP3AQ9UFN0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.98□□□□□ -2.09
NIPSNAP3AQ9UFN0 AC093850.1-201ENST00000454121 251 ntBASIC1.98□□□□□ -2.09
NIPSNAP3AQ9UFN0 AL160236.1-201ENST00000556317 195 ntBASIC1.98□□□□□ -2.09
NIPSNAP3AQ9UFN0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU6-661P-201ENST00000362409 107 ntBASIC1.97□□□□□ -2.09
NIPSNAP3AQ9UFN0 Y_RNA.337-201ENST00000365312 102 ntBASIC1.97□□□□□ -2.09
NIPSNAP3AQ9UFN0 SNORA70B-201ENST00000384210 135 ntBASIC1.97□□□□□ -2.09
NIPSNAP3AQ9UFN0 MIR1267-201ENST00000408723 78 ntBASIC1.97□□□□□ -2.09
NIPSNAP3AQ9UFN0 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
NIPSNAP3AQ9UFN0 JTBP1-201ENST00000441314 247 ntBASIC1.97□□□□□ -2.09
NIPSNAP3AQ9UFN0 Y_RNA.666-201ENST00000516187 112 ntBASIC1.97□□□□□ -2.09
NIPSNAP3AQ9UFN0 MIR3144-201ENST00000579460 79 ntBASIC1.97□□□□□ -2.09
NIPSNAP3AQ9UFN0 MIR378D2-201ENST00000580636 98 ntBASIC1.97□□□□□ -2.09
NIPSNAP3AQ9UFN0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
NIPSNAP3AQ9UFN0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU6-1123P-201ENST00000362347 106 ntBASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6-1062P-201ENST00000383908 107 ntBASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNA5SP425-201ENST00000410336 112 ntBASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6-394P-201ENST00000410735 107 ntBASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 AL356320.1-201ENST00000429616 163 ntBASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6-504P-201ENST00000516568 104 ntBASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR6873-201ENST00000622788 63 ntBASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 AC095038.3-201ENST00000634439 195 ntBASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 AC021753.1-201ENST00000635724 168 ntBASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6-268P-201ENST00000364174 107 ntBASIC1.95□□□□□ -2.1
NIPSNAP3AQ9UFN0 SNORD116-18-201ENST00000383961 92 ntBASIC1.95□□□□□ -2.1
NIPSNAP3AQ9UFN0 SNORD38C-201ENST00000384381 69 ntBASIC1.95□□□□□ -2.1
NIPSNAP3AQ9UFN0 SNRPGP13-201ENST00000442212 177 ntBASIC1.95□□□□□ -2.1
NIPSNAP3AQ9UFN0 SNORD116-25-201ENST00000516517 92 ntBASIC1.95□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6-1270P-201ENST00000517128 108 ntBASIC1.95□□□□□ -2.1
NIPSNAP3AQ9UFN0 AC097639.2-201ENST00000603159 172 ntBASIC1.95□□□□□ -2.1
NIPSNAP3AQ9UFN0 AL627230.6-201ENST00000611129 280 ntBASIC1.95□□□□□ -2.1
NIPSNAP3AQ9UFN0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 AL359851.1-201ENST00000569460 4997 ntBASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 U8.2-201ENST00000363156 134 ntBASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6-449P-201ENST00000383914 107 ntBASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR548O-201ENST00000408583 114 ntBASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 AC004965.1-201ENST00000413033 213 ntBASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 HMGN2P19-201ENST00000425149 265 ntBASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6-693P-201ENST00000516134 107 ntBASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 SUMO2P16-201ENST00000519475 264 ntBASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 AC006441.5-201ENST00000612680 209 ntBASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR8074-201ENST00000615081 81 ntBASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.94□□□□□ -2.1
NIPSNAP3AQ9UFN0 Y_RNA.66-201ENST00000362862 102 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6-1130P-201ENST00000365434 107 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 Y_RNA.398-201ENST00000383952 99 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 SNORD61-201ENST00000384252 73 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR452-201ENST00000385020 85 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 SNORA3.2-201ENST00000408221 125 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 SNRPGP14-201ENST00000435400 219 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 RPL23AP42-201ENST00000471152 471 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6-255P-201ENST00000516957 105 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 DEFB122-202ENST00000569013 197 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 AC015726.2-201ENST00000620112 122 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 uc_338.20-201ENST00000621563 178 ntBASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NIPSNAP3AQ9UFN0 SNORD24-201ENST00000383884 75 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR194-1-201ENST00000384892 85 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR516B2-201ENST00000385190 85 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 Y_RNA.580-201ENST00000391004 95 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 SNORD37.2-201ENST00000391075 66 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 Z98742.3-201ENST00000418637 326 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 AC015922.2-201ENST00000435593 184 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU7-121P-201ENST00000516604 62 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR514B-201ENST00000516774 80 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6-1212P-201ENST00000517023 104 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 MTND5P41-201ENST00000517498 206 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 DNAJC19P2-201ENST00000593340 302 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 AC106754.2-201ENST00000623006 233 ntBASIC1.92□□□□□ -2.1
NIPSNAP3AQ9UFN0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
NIPSNAP3AQ9UFN0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
NIPSNAP3AQ9UFN0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNA5SP259-201ENST00000365541 109 ntBASIC1.91□□□□□ -2.1
NIPSNAP3AQ9UFN0 Y_RNA.393-201ENST00000383936 102 ntBASIC1.91□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6-768P-201ENST00000384683 107 ntBASIC1.91□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR513A1-201ENST00000385138 129 ntBASIC1.91□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU7-25P-201ENST00000516544 62 ntBASIC1.91□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR1273D-201ENST00000577266 86 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms