Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 Y_RNA.686-201ENST00000516548 134 ntBASIC2.56□□□□□ -2
VTI1BQ9UEU0 RNU6-971P-201ENST00000516920 106 ntBASIC2.56□□□□□ -2
VTI1BQ9UEU0 RNU2-60P-201ENST00000517290 128 ntBASIC2.56□□□□□ -2
VTI1BQ9UEU0 AC011603.4-201ENST00000611325 277 ntBASIC2.56□□□□□ -2
VTI1BQ9UEU0 AL773524.1-201ENST00000614065 229 ntBASIC2.56□□□□□ -2
VTI1BQ9UEU0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.56□□□□□ -2
VTI1BQ9UEU0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VTI1BQ9UEU0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
VTI1BQ9UEU0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.55□□□□□ -2
VTI1BQ9UEU0 SNORD18B-201ENST00000365659 72 ntBASIC2.55□□□□□ -2
VTI1BQ9UEU0 RNU6-1189P-201ENST00000383958 107 ntBASIC2.55□□□□□ -2
VTI1BQ9UEU0 AC022254.1-201ENST00000567857 235 ntBASIC2.55□□□□□ -2
VTI1BQ9UEU0 MIR4778-201ENST00000577635 80 ntBASIC2.55□□□□□ -2
VTI1BQ9UEU0 MIR4287-201ENST00000579398 78 ntBASIC2.55□□□□□ -2
VTI1BQ9UEU0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
VTI1BQ9UEU0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
VTI1BQ9UEU0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
VTI1BQ9UEU0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
VTI1BQ9UEU0 AL603914.1-201ENST00000401964 204 ntBASIC2.54□□□□□ -2
VTI1BQ9UEU0 AC087499.4-201ENST00000448505 178 ntBASIC2.54□□□□□ -2
VTI1BQ9UEU0 RNU4-57P-201ENST00000515980 135 ntBASIC2.54□□□□□ -2
VTI1BQ9UEU0 MIR376A2-201ENST00000636782 80 ntBASIC2.54□□□□□ -2
VTI1BQ9UEU0 MTND5P32-201ENST00000560711 1802 ntBASIC2.54□□□□□ -2
VTI1BQ9UEU0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
VTI1BQ9UEU0 SNORA6-201ENST00000384033 151 ntBASIC2.53□□□□□ -2
VTI1BQ9UEU0 RNU6-203P-201ENST00000384038 104 ntBASIC2.53□□□□□ -2
VTI1BQ9UEU0 MIR548I2-201ENST00000408348 149 ntBASIC2.53□□□□□ -2
VTI1BQ9UEU0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.53□□□□□ -2
VTI1BQ9UEU0 RNU6-1211P-201ENST00000459179 105 ntBASIC2.53□□□□□ -2
VTI1BQ9UEU0 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
VTI1BQ9UEU0 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
VTI1BQ9UEU0 Y_RNA.757-201ENST00000578934 114 ntBASIC2.53□□□□□ -2
VTI1BQ9UEU0 RNU6-938P-201ENST00000411285 103 ntBASIC2.52□□□□□ -2.01
VTI1BQ9UEU0 MTATP6P21-201ENST00000440681 189 ntBASIC2.52□□□□□ -2.01
VTI1BQ9UEU0 RNA5SP356-201ENST00000515972 94 ntBASIC2.52□□□□□ -2.01
VTI1BQ9UEU0 Y_RNA.690-201ENST00000516603 95 ntBASIC2.52□□□□□ -2.01
VTI1BQ9UEU0 Y_RNA.692-201ENST00000516627 105 ntBASIC2.52□□□□□ -2.01
VTI1BQ9UEU0 SNORD36C-201ENST00000516733 66 ntBASIC2.52□□□□□ -2.01
VTI1BQ9UEU0 RNU6-1149P-201ENST00000516810 97 ntBASIC2.52□□□□□ -2.01
VTI1BQ9UEU0 SCARNA15-202ENST00000516881 127 ntBASIC2.52□□□□□ -2.01
VTI1BQ9UEU0 AP003484.1-201ENST00000530974 250 ntBASIC2.52□□□□□ -2.01
VTI1BQ9UEU0 RNU6-414P-201ENST00000363705 104 ntBASIC2.51□□□□□ -2.01
VTI1BQ9UEU0 SNORA5B-201ENST00000363786 132 ntBASIC2.51□□□□□ -2.01
VTI1BQ9UEU0 MIR194-1-201ENST00000384892 85 ntBASIC2.51□□□□□ -2.01
VTI1BQ9UEU0 MIR516B2-201ENST00000385190 85 ntBASIC2.51□□□□□ -2.01
VTI1BQ9UEU0 MIR136-201ENST00000385207 82 ntBASIC2.51□□□□□ -2.01
VTI1BQ9UEU0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
VTI1BQ9UEU0 RN7SKP192-201ENST00000411291 327 ntBASIC2.51□□□□□ -2.01
VTI1BQ9UEU0 SNORD109B-201ENST00000458961 67 ntBASIC2.51□□□□□ -2.01
VTI1BQ9UEU0 SNORD109A-201ENST00000459128 67 ntBASIC2.51□□□□□ -2.01
VTI1BQ9UEU0 RNA5SP236-201ENST00000516169 116 ntBASIC2.51□□□□□ -2.01
VTI1BQ9UEU0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VTI1BQ9UEU0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
VTI1BQ9UEU0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 RNU6-661P-201ENST00000362409 107 ntBASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 Y_RNA.218-201ENST00000364218 104 ntBASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 RNU6-22P-201ENST00000384355 107 ntBASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 MIR17-201ENST00000385012 84 ntBASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 RNA5SP184-201ENST00000411071 108 ntBASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 AL021397.1-201ENST00000451806 248 ntBASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 RNU6-62P-201ENST00000516526 102 ntBASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 MIR4713-201ENST00000582691 75 ntBASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 MIR6895-201ENST00000613497 78 ntBASIC2.5□□□□□ -2.01
VTI1BQ9UEU0 RNU6-439P-201ENST00000384188 106 ntBASIC2.49□□□□□ -2.01
VTI1BQ9UEU0 MIR526A1-201ENST00000384897 85 ntBASIC2.49□□□□□ -2.01
VTI1BQ9UEU0 AL161935.2-201ENST00000414627 60 ntBASIC2.49□□□□□ -2.01
VTI1BQ9UEU0 JTBP1-201ENST00000441314 247 ntBASIC2.49□□□□□ -2.01
VTI1BQ9UEU0 RPL23AP6-201ENST00000446637 472 ntBASIC2.49□□□□□ -2.01
VTI1BQ9UEU0 MIR4299-201ENST00000577899 72 ntBASIC2.49□□□□□ -2.01
VTI1BQ9UEU0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 AC062016.1-201ENST00000355719 319 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 RNU6-859P-201ENST00000362728 107 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 Y_RNA.71-201ENST00000362892 104 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 SNORA2.2-201ENST00000365473 135 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 Y_RNA.440-201ENST00000384120 114 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 RNU6-80P-201ENST00000384195 107 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 MIR634-201ENST00000385208 97 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 RNU2-52P-201ENST00000410680 190 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 AC004965.1-201ENST00000413033 213 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 AC008267.6-201ENST00000441664 139 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 RNU6-479P-201ENST00000516348 105 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 RNA5SP402-201ENST00000517148 110 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 MIR4319-201ENST00000577285 85 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 MIR3121-201ENST00000579680 77 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.48□□□□□ -2.01
VTI1BQ9UEU0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VTI1BQ9UEU0 Y_RNA.280-201ENST00000364765 112 ntBASIC2.47□□□□□ -2.01
VTI1BQ9UEU0 Y_RNA.510-201ENST00000384511 114 ntBASIC2.47□□□□□ -2.01
VTI1BQ9UEU0 RNU6-1081P-201ENST00000384537 107 ntBASIC2.47□□□□□ -2.01
VTI1BQ9UEU0 U8.17-201ENST00000391292 132 ntBASIC2.47□□□□□ -2.01
VTI1BQ9UEU0 RNU2-51P-201ENST00000410708 197 ntBASIC2.47□□□□□ -2.01
VTI1BQ9UEU0 AC095038.3-201ENST00000634439 195 ntBASIC2.47□□□□□ -2.01
VTI1BQ9UEU0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.47□□□□□ -2.01
VTI1BQ9UEU0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.01
VTI1BQ9UEU0 RNU6-457P-201ENST00000363999 107 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms