Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 Y_RNA.214-201ENST00000364201 112 ntBASIC1.07□□□□□ -2.24
CPSF2Q9P2I0 Y_RNA.541-201ENST00000384640 113 ntBASIC1.07□□□□□ -2.24
CPSF2Q9P2I0 SNORD72-201ENST00000390994 80 ntBASIC1.07□□□□□ -2.24
CPSF2Q9P2I0 RPL21P38-201ENST00000418090 167 ntBASIC1.07□□□□□ -2.24
CPSF2Q9P2I0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.07□□□□□ -2.24
CPSF2Q9P2I0 AC098869.1-201ENST00000481627 292 ntBASIC1.07□□□□□ -2.24
CPSF2Q9P2I0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.07□□□□□ -2.24
CPSF2Q9P2I0 MIR4498-201ENST00000577599 66 ntBASIC1.07□□□□□ -2.24
CPSF2Q9P2I0 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
CPSF2Q9P2I0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CPSF2Q9P2I0 RNY1P10-201ENST00000363268 113 ntBASIC1.06□□□□□ -2.24
CPSF2Q9P2I0 RNU6-770P-201ENST00000363929 105 ntBASIC1.06□□□□□ -2.24
CPSF2Q9P2I0 RNU6-806P-201ENST00000365147 105 ntBASIC1.06□□□□□ -2.24
CPSF2Q9P2I0 Y_RNA.338-201ENST00000365320 114 ntBASIC1.06□□□□□ -2.24
CPSF2Q9P2I0 AL603910.2-201ENST00000407268 136 ntBASIC1.06□□□□□ -2.24
CPSF2Q9P2I0 RNU7-90P-201ENST00000459216 62 ntBASIC1.06□□□□□ -2.24
CPSF2Q9P2I0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.06□□□□□ -2.24
CPSF2Q9P2I0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.06□□□□□ -2.24
CPSF2Q9P2I0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 Y_RNA.19-201ENST00000362462 99 ntBASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 Y_RNA.26-201ENST00000362539 101 ntBASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 RNU6-1272P-201ENST00000362776 107 ntBASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 RNU6-268P-201ENST00000364174 107 ntBASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 MIR215-201ENST00000384858 110 ntBASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 SNORD28B-201ENST00000390993 75 ntBASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 MIR1185-1-201ENST00000408598 86 ntBASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 Y_RNA.637-201ENST00000459424 114 ntBASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 RN7SKP164-201ENST00000516138 266 ntBASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 RNY3P15-201ENST00000516297 97 ntBASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 RNU2-31P-201ENST00000516954 155 ntBASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 AC008133.2-201ENST00000624540 351 ntBASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.05□□□□□ -2.24
CPSF2Q9P2I0 AC068700.1-201ENST00000565862 3754 ntBASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 Y_RNA.153-201ENST00000363615 91 ntBASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 RNU6-1205P-201ENST00000363625 106 ntBASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 AL603825.1-201ENST00000438481 80 ntBASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 MTND4LP30-201ENST00000454092 297 ntBASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 RNU6-830P-201ENST00000516353 107 ntBASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 AL512605.2-201ENST00000592972 256 ntBASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 AC013791.1-201ENST00000616619 62 ntBASIC1.04□□□□□ -2.24
CPSF2Q9P2I0 SNORA25.1-201ENST00000362326 128 ntBASIC1.03□□□□□ -2.24
CPSF2Q9P2I0 SNORD114-24-201ENST00000365029 72 ntBASIC1.03□□□□□ -2.24
CPSF2Q9P2I0 MIR200A-201ENST00000384875 90 ntBASIC1.03□□□□□ -2.24
CPSF2Q9P2I0 SNORA53-201ENST00000391141 249 ntBASIC1.03□□□□□ -2.24
CPSF2Q9P2I0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.03□□□□□ -2.24
CPSF2Q9P2I0 AC091959.1-201ENST00000495857 238 ntBASIC1.03□□□□□ -2.24
CPSF2Q9P2I0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.03□□□□□ -2.24
CPSF2Q9P2I0 MIR548AR-201ENST00000582191 57 ntBASIC1.03□□□□□ -2.24
CPSF2Q9P2I0 AL356055.1-201ENST00000602528 446 ntBASIC1.03□□□□□ -2.24
CPSF2Q9P2I0 AL359821.1-201ENST00000605519 182 ntBASIC1.03□□□□□ -2.24
CPSF2Q9P2I0 Pinc.1-201ENST00000616452 154 ntBASIC1.03□□□□□ -2.24
CPSF2Q9P2I0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 RNU6-326P-201ENST00000365480 107 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 RNU6-144P-201ENST00000383951 107 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 RNU6-514P-201ENST00000384208 107 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 MTCYBP6-201ENST00000441810 138 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 RNU6-1007P-201ENST00000516586 107 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 RNU6-1137P-201ENST00000517073 99 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 MIR4781-201ENST00000585250 76 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 AL020996.3-201ENST00000606617 222 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 AC037487.3-201ENST00000606668 112 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 AL021707.8-201ENST00000609428 183 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 AC006441.5-201ENST00000612680 209 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 SEPT14P17-201ENST00000617978 177 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 AC015726.2-201ENST00000620112 122 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 MIR4251-201ENST00000635819 61 ntBASIC1.02□□□□□ -2.25
CPSF2Q9P2I0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CPSF2Q9P2I0 Y_RNA.202-201ENST00000364083 110 ntBASIC1.01□□□□□ -2.25
CPSF2Q9P2I0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.01□□□□□ -2.25
CPSF2Q9P2I0 RNU6-383P-201ENST00000410864 94 ntBASIC1.01□□□□□ -2.25
CPSF2Q9P2I0 BTF3P11-201ENST00000426582 477 ntBASIC1.01□□□□□ -2.25
CPSF2Q9P2I0 PDCD5P2-201ENST00000507570 312 ntBASIC1.01□□□□□ -2.25
CPSF2Q9P2I0 Y_RNA.701-201ENST00000516812 110 ntBASIC1.01□□□□□ -2.25
CPSF2Q9P2I0 AP003733.2-201ENST00000529409 171 ntBASIC1.01□□□□□ -2.25
CPSF2Q9P2I0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.01□□□□□ -2.25
CPSF2Q9P2I0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
CPSF2Q9P2I0 Y_RNA.16-201ENST00000362421 102 ntBASIC1□□□□□ -2.25
CPSF2Q9P2I0 Y_RNA.64-201ENST00000362845 102 ntBASIC1□□□□□ -2.25
CPSF2Q9P2I0 Y_RNA.152-201ENST00000363578 100 ntBASIC1□□□□□ -2.25
CPSF2Q9P2I0 Y_RNA.242-201ENST00000364473 110 ntBASIC1□□□□□ -2.25
CPSF2Q9P2I0 RNU6-662P-201ENST00000384253 104 ntBASIC1□□□□□ -2.25
CPSF2Q9P2I0 MIR942-201ENST00000401111 86 ntBASIC1□□□□□ -2.25
CPSF2Q9P2I0 POLR2J4-204ENST00000418424 324 ntBASIC1□□□□□ -2.25
CPSF2Q9P2I0 AC087343.1-201ENST00000477341 475 ntBASIC1□□□□□ -2.25
CPSF2Q9P2I0 TRMT112P2-201ENST00000512910 132 ntBASIC1□□□□□ -2.25
CPSF2Q9P2I0 RNU6-1143P-201ENST00000516125 104 ntBASIC1□□□□□ -2.25
CPSF2Q9P2I0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1□□□□□ -2.25
CPSF2Q9P2I0 AC022140.2-201ENST00000623500 188 ntBASIC1□□□□□ -2.25
CPSF2Q9P2I0 Y_RNA.217-201ENST00000364214 105 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms