Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 U8.17-201ENST00000391292 132 ntBASIC0.74□□□□□ -2.29
ZCCHC3Q9NUD5 AL603910.2-201ENST00000407268 136 ntBASIC0.74□□□□□ -2.29
ZCCHC3Q9NUD5 SNORD11-201ENST00000459124 84 ntBASIC0.74□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-191P-201ENST00000516295 94 ntBASIC0.74□□□□□ -2.29
ZCCHC3Q9NUD5 MIR4300-201ENST00000581016 96 ntBASIC0.74□□□□□ -2.29
ZCCHC3Q9NUD5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.74□□□□□ -2.29
ZCCHC3Q9NUD5 AL353765.1-201ENST00000605514 183 ntBASIC0.74□□□□□ -2.29
ZCCHC3Q9NUD5 SNORA63.7-201ENST00000365579 123 ntBASIC0.73□□□□□ -2.29
ZCCHC3Q9NUD5 SNORD72-201ENST00000390994 80 ntBASIC0.73□□□□□ -2.29
ZCCHC3Q9NUD5 SNORD111-201ENST00000408139 94 ntBASIC0.73□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
ZCCHC3Q9NUD5 AC113410.1-201ENST00000505029 247 ntBASIC0.73□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-1007P-201ENST00000516586 107 ntBASIC0.73□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-94P-201ENST00000607728 107 ntBASIC0.73□□□□□ -2.29
ZCCHC3Q9NUD5 AC006441.5-201ENST00000612680 209 ntBASIC0.73□□□□□ -2.29
ZCCHC3Q9NUD5 Y_RNA.136-201ENST00000363444 102 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 SNORD113-8-201ENST00000363497 74 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-899P-201ENST00000363947 107 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-654P-201ENST00000364373 107 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 Y_RNA.242-201ENST00000364473 110 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 SNORD113.3-201ENST00000364630 78 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 SNORD42.2-201ENST00000365570 69 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 Y_RNA.445-201ENST00000384168 102 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-1067P-201ENST00000384752 107 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 SNORD89-201ENST00000390981 114 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 MTCO2P33-201ENST00000402100 465 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 Y_RNA.639-201ENST00000458981 102 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-1110P-201ENST00000516462 101 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 AC104695.3-201ENST00000604052 296 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 MIR376A1-201ENST00000616574 68 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 MIR6767-201ENST00000637302 66 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
ZCCHC3Q9NUD5 Y_RNA.183-201ENST00000363882 113 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 Y_RNA.431-201ENST00000384086 102 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 MIR570-201ENST00000384917 97 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-613P-201ENST00000410412 108 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-496P-201ENST00000516145 99 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 MIR2115-201ENST00000516657 100 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 RNA5SP102-201ENST00000516865 106 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 AC025627.3-201ENST00000582078 182 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 AC124312.5-201ENST00000604451 268 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 AC104465.1-201ENST00000611365 139 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 AC090971.5-201ENST00000621102 293 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 AC090574.1-201ENST00000623186 233 ntBASIC0.71□□□□□ -2.3
ZCCHC3Q9NUD5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 MIR369-201ENST00000362155 70 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 MIR373-201ENST00000362273 69 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-102P-201ENST00000384485 104 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 Y_RNA.537-201ENST00000384626 109 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 SNORD115-46-201ENST00000390982 71 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 Y_RNA.645-201ENST00000391229 102 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 RPS26P5-201ENST00000418544 335 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 HSPE1P25-201ENST00000455484 251 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-764P-201ENST00000516396 105 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 Y_RNA.715-201ENST00000517082 110 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 RNU7-181P-201ENST00000517234 74 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 C8orf59P2-201ENST00000603441 271 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 AC108706.1-201ENST00000611053 297 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 AC015726.2-201ENST00000620112 122 ntBASIC0.7□□□□□ -2.3
ZCCHC3Q9NUD5 MIR96-201ENST00000362288 78 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 Y_RNA.31-201ENST00000362574 102 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 SNORA1.2-201ENST00000365189 134 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-144P-201ENST00000383951 107 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 Y_RNA.419-201ENST00000384041 102 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 SNORA51.10-201ENST00000384418 136 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-110P-201ENST00000384508 104 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-763P-201ENST00000390865 106 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-308P-201ENST00000390957 107 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-994P-201ENST00000410507 111 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 Y_RNA.602-201ENST00000410535 92 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 AC005534.2-201ENST00000431047 433 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 AC067940.1-201ENST00000458411 300 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 RNU4-57P-201ENST00000515980 135 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-397P-201ENST00000516226 104 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 RAC1P9-201ENST00000604990 392 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 AL136317.1-201ENST00000612653 226 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 7SK.10-201ENST00000621414 298 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 AC023934.1-201ENST00000574529 2389 ntBASIC0.69□□□□□ -2.3
ZCCHC3Q9NUD5 MIR337-201ENST00000362281 93 ntBASIC0.68□□□□□ -2.3
ZCCHC3Q9NUD5 RNA5SP432-201ENST00000362480 116 ntBASIC0.68□□□□□ -2.3
ZCCHC3Q9NUD5 RNU4-90P-201ENST00000362773 141 ntBASIC0.68□□□□□ -2.3
ZCCHC3Q9NUD5 SNORD99-201ENST00000408612 74 ntBASIC0.68□□□□□ -2.3
ZCCHC3Q9NUD5 AC022028.1-201ENST00000412054 408 ntBASIC0.68□□□□□ -2.3
ZCCHC3Q9NUD5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.68□□□□□ -2.3
ZCCHC3Q9NUD5 PMCHL1-202ENST00000423102 261 ntBASIC0.68□□□□□ -2.3
ZCCHC3Q9NUD5 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-897P-201ENST00000517135 105 ntBASIC0.68□□□□□ -2.3
ZCCHC3Q9NUD5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.68□□□□□ -2.3
ZCCHC3Q9NUD5 MIR4791-201ENST00000607666 84 ntBASIC0.68□□□□□ -2.3
ZCCHC3Q9NUD5 AC022140.2-201ENST00000623500 188 ntBASIC0.68□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-396P-201ENST00000365369 105 ntBASIC0.67□□□□□ -2.3
ZCCHC3Q9NUD5 SNORA2B-201ENST00000384583 137 ntBASIC0.67□□□□□ -2.3
ZCCHC3Q9NUD5 Y_RNA.569-201ENST00000384749 103 ntBASIC0.67□□□□□ -2.3
ZCCHC3Q9NUD5 RNU6-823P-201ENST00000391042 103 ntBASIC0.67□□□□□ -2.3
ZCCHC3Q9NUD5 RNA5SP95-201ENST00000410319 137 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms