Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ECHDC1Q9NTX5 Y_RNA.20-201ENST00000362479 113 ntBASIC1.46□□□□□ -2.18
ECHDC1Q9NTX5 SNORD68-201ENST00000363214 84 ntBASIC1.46□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-392P-201ENST00000364926 101 ntBASIC1.46□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-424P-201ENST00000384367 105 ntBASIC1.46□□□□□ -2.18
ECHDC1Q9NTX5 MIR522-201ENST00000385071 87 ntBASIC1.46□□□□□ -2.18
ECHDC1Q9NTX5 SNORD58.1-201ENST00000391313 66 ntBASIC1.46□□□□□ -2.18
ECHDC1Q9NTX5 MLLT10P1-201ENST00000418346 262 ntBASIC1.46□□□□□ -2.18
ECHDC1Q9NTX5 JTBP1-201ENST00000441314 247 ntBASIC1.46□□□□□ -2.18
ECHDC1Q9NTX5 RNU7-116P-201ENST00000516940 62 ntBASIC1.46□□□□□ -2.18
ECHDC1Q9NTX5 SNORA44.1-201ENST00000517031 108 ntBASIC1.46□□□□□ -2.18
ECHDC1Q9NTX5 SUMO2P16-201ENST00000519475 264 ntBASIC1.46□□□□□ -2.18
ECHDC1Q9NTX5 AL358944.1-201ENST00000528537 144 ntBASIC1.46□□□□□ -2.18
ECHDC1Q9NTX5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-1205P-201ENST00000363625 106 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-379P-201ENST00000363813 104 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 snoU2_19.4-201ENST00000364329 80 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 Y_RNA.292-201ENST00000364904 97 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 Y_RNA.293-201ENST00000364908 93 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 SNORD50B-201ENST00000364995 70 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 Y_RNA.590-201ENST00000410140 107 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 PIGPP3-201ENST00000425307 415 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 SCARNA8-201ENST00000515924 131 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-1023P-201ENST00000516137 106 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 MIR6078-201ENST00000611069 100 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 MIR8074-201ENST00000615081 81 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 AL365265.1-201ENST00000621045 234 ntBASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.45□□□□□ -2.18
ECHDC1Q9NTX5 MIR302D-201ENST00000362275 68 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 Y_RNA.24-201ENST00000362508 103 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-653P-201ENST00000363074 106 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-674P-201ENST00000363831 107 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 Y_RNA.224-201ENST00000364308 111 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 RNY4P28-201ENST00000365281 93 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 PGBD4P5-201ENST00000445958 426 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 SNORD11-201ENST00000459124 84 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 HMGN1P7-201ENST00000491722 313 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-453P-201ENST00000516819 85 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 AC100767.1-201ENST00000528178 123 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 RPL23AP91-201ENST00000569211 455 ntBASIC1.44□□□□□ -2.18
ECHDC1Q9NTX5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 Y_RNA.118-201ENST00000363300 101 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-414P-201ENST00000363705 104 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-969P-201ENST00000383900 105 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 MT-TT-201ENST00000387460 66 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 RNA5SP482-201ENST00000391269 118 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 AL034345.1-201ENST00000407768 123 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 MIR548H3-201ENST00000408771 118 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 AC114811.1-201ENST00000507207 168 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 Y_RNA.679-201ENST00000516416 91 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-1271P-201ENST00000517049 105 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 AC015688.6-201ENST00000577737 104 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 MIR4762-201ENST00000585261 75 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 AL021707.8-201ENST00000609428 183 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 AL442067.1-201ENST00000613261 223 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 AC073349.3-201ENST00000617616 186 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 AC078938.1-201ENST00000620993 318 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 AC106754.2-201ENST00000623006 233 ntBASIC1.43□□□□□ -2.18
ECHDC1Q9NTX5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 SNORA20.1-201ENST00000364790 130 ntBASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 MIR626-201ENST00000385032 94 ntBASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 SNORD72-201ENST00000390994 80 ntBASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 MIR1267-201ENST00000408723 78 ntBASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 BX284668.6-201ENST00000606899 438 ntBASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
ECHDC1Q9NTX5 WWP1P1-201ENST00000466609 2769 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 Y_RNA.188-201ENST00000363952 111 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 U8.5-201ENST00000364528 136 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 Y_RNA.304-201ENST00000365011 112 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 MIR562-201ENST00000384894 95 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 MIR526A1-201ENST00000384897 85 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 MIR660-201ENST00000385235 97 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 FTH1P12-201ENST00000432137 551 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 RNU7-12P-201ENST00000516030 62 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-388P-201ENST00000517012 105 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 RNU6-389P-201ENST00000517048 105 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 AC006006.1-201ENST00000603082 144 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 SNORD3E-202ENST00000627253 216 ntBASIC1.41□□□□□ -2.18
ECHDC1Q9NTX5 ICE2P2-201ENST00000483823 2787 ntBASIC1.4□□□□□ -2.19
ECHDC1Q9NTX5 SNORD1A-201ENST00000364968 72 ntBASIC1.4□□□□□ -2.19
ECHDC1Q9NTX5 RNU6-144P-201ENST00000383951 107 ntBASIC1.4□□□□□ -2.19
ECHDC1Q9NTX5 RNU11-5P-201ENST00000391216 129 ntBASIC1.4□□□□□ -2.19
ECHDC1Q9NTX5 AL591704.2-201ENST00000421658 181 ntBASIC1.4□□□□□ -2.19
ECHDC1Q9NTX5 AC245047.8-201ENST00000456455 284 ntBASIC1.4□□□□□ -2.19
ECHDC1Q9NTX5 RNU7-28P-201ENST00000516759 62 ntBASIC1.4□□□□□ -2.19
ECHDC1Q9NTX5 AL049861.1-201ENST00000603130 150 ntBASIC1.4□□□□□ -2.19
ECHDC1Q9NTX5 AC120024.3-201ENST00000603167 156 ntBASIC1.4□□□□□ -2.19
ECHDC1Q9NTX5 AL513423.1-201ENST00000621695 132 ntBASIC1.4□□□□□ -2.19
ECHDC1Q9NTX5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms