Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 MTATP8P2-201ENST00000435212 202 ntBASIC3.11□□□□□ -1.91
ATG3Q9NT62 HMGN2P5-201ENST00000436882 273 ntBASIC3.11□□□□□ -1.91
ATG3Q9NT62 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.11□□□□□ -1.91
ATG3Q9NT62 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.11□□□□□ -1.91
ATG3Q9NT62 RNU6-693P-201ENST00000516134 107 ntBASIC3.11□□□□□ -1.91
ATG3Q9NT62 RPPH1-2P-201ENST00000516688 293 ntBASIC3.11□□□□□ -1.91
ATG3Q9NT62 RNU6-965P-201ENST00000516721 96 ntBASIC3.11□□□□□ -1.91
ATG3Q9NT62 AC068339.1-201ENST00000526965 141 ntBASIC3.11□□□□□ -1.91
ATG3Q9NT62 AC015712.3-201ENST00000559380 164 ntBASIC3.11□□□□□ -1.91
ATG3Q9NT62 MIR5009-201ENST00000578736 100 ntBASIC3.11□□□□□ -1.91
ATG3Q9NT62 MIR3670-2-201ENST00000582974 65 ntBASIC3.11□□□□□ -1.91
ATG3Q9NT62 MIR3670-1-201ENST00000584160 65 ntBASIC3.11□□□□□ -1.91
ATG3Q9NT62 MIR3670-3-201ENST00000584855 65 ntBASIC3.11□□□□□ -1.91
ATG3Q9NT62 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.11□□□□□ -1.91
ATG3Q9NT62 MIR3670-4-201ENST00000612260 65 ntBASIC3.11□□□□□ -1.91
ATG3Q9NT62 SNORD24-201ENST00000383884 75 ntBASIC3.1□□□□□ -1.91
ATG3Q9NT62 MIR518F-201ENST00000384973 87 ntBASIC3.1□□□□□ -1.91
ATG3Q9NT62 Y_RNA.621-201ENST00000411065 96 ntBASIC3.1□□□□□ -1.91
ATG3Q9NT62 AL591806.2-201ENST00000433122 173 ntBASIC3.1□□□□□ -1.91
ATG3Q9NT62 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.1□□□□□ -1.91
ATG3Q9NT62 RNY4P20-201ENST00000516678 93 ntBASIC3.1□□□□□ -1.91
ATG3Q9NT62 AC008507.4-201ENST00000585464 127 ntBASIC3.1□□□□□ -1.91
ATG3Q9NT62 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.1□□□□□ -1.91
ATG3Q9NT62 AC010297.1-201ENST00000623948 149 ntBASIC3.1□□□□□ -1.91
ATG3Q9NT62 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATG3Q9NT62 Y_RNA.344-201ENST00000365381 112 ntBASIC3.09□□□□□ -1.91
ATG3Q9NT62 RPS12P2-201ENST00000439728 269 ntBASIC3.09□□□□□ -1.91
ATG3Q9NT62 RPS26P48-201ENST00000491713 339 ntBASIC3.09□□□□□ -1.91
ATG3Q9NT62 AC009487.4-201ENST00000624969 3585 ntBASIC3.09□□□□□ -1.92
ATG3Q9NT62 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATG3Q9NT62 SNORD114-1-201ENST00000362705 72 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 RNU6-414P-201ENST00000363705 104 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 Y_RNA.220-201ENST00000364244 109 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 Y_RNA.253-201ENST00000364562 112 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 RNU6-438P-201ENST00000365561 103 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 RNU6-1152P-201ENST00000384576 107 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 RNU6-1072P-201ENST00000384703 107 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 RNU6-443P-201ENST00000384780 107 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 SNRPGP10-201ENST00000432323 225 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATG3Q9NT62 HMGN1P7-201ENST00000491722 313 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 RNU6-904P-201ENST00000516206 101 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.08□□□□□ -1.92
ATG3Q9NT62 AC073413.2-201ENST00000604332 360 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 U2.20-201ENST00000613956 192 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 AL449363.1-201ENST00000617815 186 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 MALAT1.1-201ENST00000618249 95 ntBASIC3.08□□□□□ -1.92
ATG3Q9NT62 MIR340-201ENST00000362125 95 ntBASIC3.07□□□□□ -1.92
ATG3Q9NT62 VTRNA1-1-201ENST00000363120 99 ntBASIC3.07□□□□□ -1.92
ATG3Q9NT62 RNY1P10-201ENST00000363268 113 ntBASIC3.07□□□□□ -1.92
ATG3Q9NT62 RNY4P6-201ENST00000363667 96 ntBASIC3.07□□□□□ -1.92
ATG3Q9NT62 RNU6-1104P-201ENST00000384723 104 ntBASIC3.07□□□□□ -1.92
ATG3Q9NT62 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ATG3Q9NT62 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ATG3Q9NT62 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.07□□□□□ -1.92
ATG3Q9NT62 Y_RNA.685-201ENST00000516532 108 ntBASIC3.07□□□□□ -1.92
ATG3Q9NT62 MIR5197-201ENST00000583721 112 ntBASIC3.07□□□□□ -1.92
ATG3Q9NT62 SNORD115-40-201ENST00000606510 82 ntBASIC3.07□□□□□ -1.92
ATG3Q9NT62 Y_RNA.818-201ENST00000618813 71 ntBASIC3.07□□□□□ -1.92
ATG3Q9NT62 MIR494-201ENST00000349529 81 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 RNU6-349P-201ENST00000362402 107 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 Y_RNA.342-201ENST00000365352 113 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 RNU1-109P-201ENST00000383960 147 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 RNU6-820P-201ENST00000384273 107 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 MIR450A2-201ENST00000385022 100 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATG3Q9NT62 RPS3AP1-201ENST00000413190 320 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 RNU7-26P-201ENST00000458980 63 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 RNU6-1291P-201ENST00000516591 104 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 RNU7-128P-201ENST00000517247 62 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 AC141557.1-201ENST00000540982 400 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 MIR5739-201ENST00000619803 80 ntBASIC3.06□□□□□ -1.92
ATG3Q9NT62 Y_RNA.78-201ENST00000362970 110 ntBASIC3.05□□□□□ -1.92
ATG3Q9NT62 RNU1-96P-201ENST00000364163 162 ntBASIC3.05□□□□□ -1.92
ATG3Q9NT62 AC060773.1-201ENST00000421698 310 ntBASIC3.05□□□□□ -1.92
ATG3Q9NT62 SNRPGP13-201ENST00000442212 177 ntBASIC3.05□□□□□ -1.92
ATG3Q9NT62 AC233266.1-201ENST00000454518 96 ntBASIC3.05□□□□□ -1.92
ATG3Q9NT62 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.05□□□□□ -1.92
ATG3Q9NT62 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.05□□□□□ -1.92
ATG3Q9NT62 RNU2-34P-201ENST00000516534 121 ntBASIC3.05□□□□□ -1.92
ATG3Q9NT62 RNU6-158P-201ENST00000517104 100 ntBASIC3.05□□□□□ -1.92
ATG3Q9NT62 AC242852.1-201ENST00000612151 96 ntBASIC3.05□□□□□ -1.92
ATG3Q9NT62 AC134878.1-201ENST00000619901 243 ntBASIC3.05□□□□□ -1.92
ATG3Q9NT62 AC244015.1-201ENST00000622301 99 ntBASIC3.05□□□□□ -1.92
ATG3Q9NT62 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG3Q9NT62 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATG3Q9NT62 MIR520G-201ENST00000385064 90 ntBASIC3.04□□□□□ -1.92
ATG3Q9NT62 SNORD78.1-201ENST00000390866 65 ntBASIC3.04□□□□□ -1.92
ATG3Q9NT62 AL603825.1-201ENST00000438481 80 ntBASIC3.04□□□□□ -1.92
ATG3Q9NT62 RNA5SP490-201ENST00000517141 136 ntBASIC3.04□□□□□ -1.92
ATG3Q9NT62 RNU6-586P-201ENST00000517265 104 ntBASIC3.04□□□□□ -1.92
ATG3Q9NT62 AC084364.2-201ENST00000546924 395 ntBASIC3.04□□□□□ -1.92
ATG3Q9NT62 AC022523.2-201ENST00000561045 150 ntBASIC3.04□□□□□ -1.92
ATG3Q9NT62 DEFB122-202ENST00000569013 197 ntBASIC3.04□□□□□ -1.92
ATG3Q9NT62 FO624990.1-201ENST00000636373 85 ntBASIC3.04□□□□□ -1.92
ATG3Q9NT62 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
ATG3Q9NT62 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
ATG3Q9NT62 RNU1-91P-201ENST00000364746 163 ntBASIC3.03□□□□□ -1.92
ATG3Q9NT62 RNU6-1186P-201ENST00000410429 97 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms