Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 Y_RNA.210-201ENST00000364161 110 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.330-201ENST00000365230 109 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.380-201ENST00000365663 111 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-442P-201ENST00000383968 104 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.455-201ENST00000384230 98 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 MIR19B1-201ENST00000384829 87 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 MIR15B-201ENST00000385045 98 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 SNORD28B-201ENST00000390993 75 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 SNORD72-201ENST00000390994 80 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 SNORD12-201ENST00000391002 90 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 RPL21P38-201ENST00000418090 167 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 RNU7-21P-201ENST00000459430 62 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 AC005840.1-201ENST00000498412 377 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 AC113195.1-201ENST00000579952 141 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 AC136443.5-201ENST00000603741 370 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 AC007742.2-201ENST00000618226 398 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 snoU2_19.2-201ENST00000363024 80 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 RNY1P10-201ENST00000363268 113 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-770P-201ENST00000363929 105 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-899P-201ENST00000363947 107 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-290P-201ENST00000365212 101 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 Y_RNA.541-201ENST00000384640 113 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 SNRPGP14-201ENST00000435400 219 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-1137P-201ENST00000517073 99 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 MIR4680-201ENST00000580906 66 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 MIR2681-201ENST00000581814 105 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 AC008507.4-201ENST00000585464 127 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 AC087685.1-201ENST00000587507 141 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
EXOSC3Q9NQT5 AC068700.1-201ENST00000565862 3754 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 Y_RNA.64-201ENST00000362845 102 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-1205P-201ENST00000363625 106 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-674P-201ENST00000363831 107 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-268P-201ENST00000364174 107 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 SNORD38C-201ENST00000384381 69 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 AL603910.2-201ENST00000407268 136 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-383P-201ENST00000410864 94 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 SNORD11-201ENST00000459124 84 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 Y_RNA.637-201ENST00000459424 114 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 RNU7-43P-201ENST00000516554 64 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 MIR548AR-201ENST00000582191 57 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 AL512605.2-201ENST00000592972 256 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 AL355297.3-201ENST00000604082 446 ntBASIC0.82□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-662P-201ENST00000384253 104 ntBASIC0.81□□□□□ -2.28
EXOSC3Q9NQT5 MIR570-201ENST00000384917 97 ntBASIC0.81□□□□□ -2.28
EXOSC3Q9NQT5 MIR1185-1-201ENST00000408598 86 ntBASIC0.81□□□□□ -2.28
EXOSC3Q9NQT5 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
EXOSC3Q9NQT5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.81□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-1053P-201ENST00000515930 101 ntBASIC0.81□□□□□ -2.28
EXOSC3Q9NQT5 AC023827.1-201ENST00000569247 97 ntBASIC0.81□□□□□ -2.28
EXOSC3Q9NQT5 MIR4781-201ENST00000585250 76 ntBASIC0.81□□□□□ -2.28
EXOSC3Q9NQT5 AL356055.1-201ENST00000602528 446 ntBASIC0.81□□□□□ -2.28
EXOSC3Q9NQT5 AC015726.2-201ENST00000620112 122 ntBASIC0.81□□□□□ -2.28
EXOSC3Q9NQT5 SNORA25.1-201ENST00000362326 128 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 Y_RNA.16-201ENST00000362421 102 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 Y_RNA.153-201ENST00000363615 91 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 Y_RNA.338-201ENST00000365320 114 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 MIR942-201ENST00000401111 86 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 BTF3P11-201ENST00000426582 477 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 MTND5P22-201ENST00000458380 195 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 RNU7-90P-201ENST00000459216 62 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 AC091959.1-201ENST00000495857 238 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 RN7SKP164-201ENST00000516138 266 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-1153P-201ENST00000516760 105 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 Y_RNA.701-201ENST00000516812 110 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 RNU2-31P-201ENST00000516954 155 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 RNU7-181P-201ENST00000517234 74 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 AP003716.2-201ENST00000528260 108 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 Pinc.1-201ENST00000616452 154 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 AC008133.2-201ENST00000624540 351 ntBASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
EXOSC3Q9NQT5 RNA5SP48-201ENST00000363969 126 ntBASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-514P-201ENST00000384208 107 ntBASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 SNORA53-201ENST00000391141 249 ntBASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 AP003733.2-201ENST00000529409 171 ntBASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 FAM71BP1-201ENST00000604431 523 ntBASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 AC037487.3-201ENST00000606668 112 ntBASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 AC013791.1-201ENST00000616619 62 ntBASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 MIR4251-201ENST00000635819 61 ntBASIC0.79□□□□□ -2.28
EXOSC3Q9NQT5 RNA5SP432-201ENST00000362480 116 ntBASIC0.78□□□□□ -2.28
EXOSC3Q9NQT5 RNU6-1272P-201ENST00000362776 107 ntBASIC0.78□□□□□ -2.28
EXOSC3Q9NQT5 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
EXOSC3Q9NQT5 Y_RNA.202-201ENST00000364083 110 ntBASIC0.78□□□□□ -2.28
EXOSC3Q9NQT5 U8.17-201ENST00000391292 132 ntBASIC0.78□□□□□ -2.28
EXOSC3Q9NQT5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.78□□□□□ -2.28
EXOSC3Q9NQT5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.78□□□□□ -2.28
EXOSC3Q9NQT5 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
EXOSC3Q9NQT5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.78□□□□□ -2.28
EXOSC3Q9NQT5 AL020996.3-201ENST00000606617 222 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 693.3 ms