Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL049861.1-201ENST00000603130 150 ntBASIC2.16□□□□□ -2.06
VTA1Q9NP79 AC120024.3-201ENST00000603167 156 ntBASIC2.16□□□□□ -2.06
VTA1Q9NP79 AP000942.3-201ENST00000603702 160 ntBASIC2.16□□□□□ -2.06
VTA1Q9NP79 MIR424-201ENST00000362227 98 ntBASIC2.15□□□□□ -2.07
VTA1Q9NP79 RNU6-833P-201ENST00000363486 107 ntBASIC2.15□□□□□ -2.07
VTA1Q9NP79 SNORD14E-201ENST00000364009 85 ntBASIC2.15□□□□□ -2.07
VTA1Q9NP79 RNU6-442P-201ENST00000383968 104 ntBASIC2.15□□□□□ -2.07
VTA1Q9NP79 RNU6-424P-201ENST00000384367 105 ntBASIC2.15□□□□□ -2.07
VTA1Q9NP79 MIR802-201ENST00000390235 94 ntBASIC2.15□□□□□ -2.07
VTA1Q9NP79 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
VTA1Q9NP79 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.15□□□□□ -2.07
VTA1Q9NP79 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.15□□□□□ -2.07
VTA1Q9NP79 RNU7-149P-201ENST00000516739 59 ntBASIC2.15□□□□□ -2.07
VTA1Q9NP79 RNU6-453P-201ENST00000516819 85 ntBASIC2.15□□□□□ -2.07
VTA1Q9NP79 SNRPGP19-201ENST00000603826 189 ntBASIC2.15□□□□□ -2.07
VTA1Q9NP79 AC021506.2-201ENST00000612354 169 ntBASIC2.15□□□□□ -2.07
VTA1Q9NP79 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.15□□□□□ -2.07
VTA1Q9NP79 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.15□□□□□ -2.07
VTA1Q9NP79 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
VTA1Q9NP79 MIRLET7C-201ENST00000362160 84 ntBASIC2.14□□□□□ -2.07
VTA1Q9NP79 RNU6-682P-201ENST00000363843 106 ntBASIC2.14□□□□□ -2.07
VTA1Q9NP79 Y_RNA.432-201ENST00000384087 111 ntBASIC2.14□□□□□ -2.07
VTA1Q9NP79 JTBP1-201ENST00000441314 247 ntBASIC2.14□□□□□ -2.07
VTA1Q9NP79 MRPS17P9-201ENST00000511924 393 ntBASIC2.14□□□□□ -2.07
VTA1Q9NP79 SNORD45.4-201ENST00000516629 73 ntBASIC2.14□□□□□ -2.07
VTA1Q9NP79 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.14□□□□□ -2.07
VTA1Q9NP79 MIR4431-201ENST00000579990 94 ntBASIC2.14□□□□□ -2.07
VTA1Q9NP79 Pinc.1-201ENST00000616452 154 ntBASIC2.14□□□□□ -2.07
VTA1Q9NP79 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VTA1Q9NP79 AL359851.1-201ENST00000569460 4997 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 Y_RNA.180-201ENST00000363867 113 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 Y_RNA.357-201ENST00000365487 109 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 Y_RNA.412-201ENST00000384001 104 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 RNU6-886P-201ENST00000384319 105 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 RNU6-163P-201ENST00000384396 106 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 MT-TT-201ENST00000387460 66 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 MIR891A-201ENST00000401237 79 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 AL121914.1-201ENST00000450188 156 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 AL021397.1-201ENST00000451806 248 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 RNA5SP168-201ENST00000516642 112 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 RNU6-861P-201ENST00000516745 106 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.13□□□□□ -2.07
VTA1Q9NP79 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.13□□□□□ -2.07
VTA1Q9NP79 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VTA1Q9NP79 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VTA1Q9NP79 RNA5SP160-201ENST00000364866 120 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 RNA5SP138-201ENST00000365098 114 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 Y_RNA.441-201ENST00000384123 112 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 MIR15B-201ENST00000385045 98 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 MIR660-201ENST00000385235 97 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 SNORA12.1-201ENST00000390873 148 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 RNU2-40P-201ENST00000410833 196 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 RNU6-1135P-201ENST00000411083 103 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 AC003989.2-201ENST00000440224 169 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 SNRPGP8-201ENST00000454064 226 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 RNU6-1219P-201ENST00000516143 112 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 RNU6-197P-201ENST00000516680 100 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.12□□□□□ -2.07
VTA1Q9NP79 AC097639.2-201ENST00000603159 172 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 uc_338.20-201ENST00000621563 178 ntBASIC2.12□□□□□ -2.07
VTA1Q9NP79 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VTA1Q9NP79 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VTA1Q9NP79 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
VTA1Q9NP79 Y_RNA.140-201ENST00000363474 103 ntBASIC2.11□□□□□ -2.07
VTA1Q9NP79 SNORD50B-201ENST00000364995 70 ntBASIC2.11□□□□□ -2.07
VTA1Q9NP79 MIR9-3-201ENST00000385084 90 ntBASIC2.11□□□□□ -2.07
VTA1Q9NP79 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
VTA1Q9NP79 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
VTA1Q9NP79 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.11□□□□□ -2.07
VTA1Q9NP79 AC099513.1-201ENST00000490423 301 ntBASIC2.11□□□□□ -2.07
VTA1Q9NP79 RNU6-365P-201ENST00000517113 106 ntBASIC2.11□□□□□ -2.07
VTA1Q9NP79 MIR3683-201ENST00000580847 82 ntBASIC2.11□□□□□ -2.07
VTA1Q9NP79 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.11□□□□□ -2.07
VTA1Q9NP79 MIR8074-201ENST00000615081 81 ntBASIC2.11□□□□□ -2.07
VTA1Q9NP79 SNORD45.3-201ENST00000363836 72 ntBASIC2.1□□□□□ -2.07
VTA1Q9NP79 Y_RNA.464-201ENST00000384282 110 ntBASIC2.1□□□□□ -2.07
VTA1Q9NP79 U8.16-201ENST00000391279 133 ntBASIC2.1□□□□□ -2.07
VTA1Q9NP79 MIR548I3-201ENST00000408378 149 ntBASIC2.1□□□□□ -2.07
VTA1Q9NP79 MIR548I1-201ENST00000408810 149 ntBASIC2.1□□□□□ -2.07
VTA1Q9NP79 RNU2-70P-201ENST00000410718 179 ntBASIC2.1□□□□□ -2.07
VTA1Q9NP79 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.1□□□□□ -2.07
VTA1Q9NP79 CALM2P4-201ENST00000430810 426 ntBASIC2.1□□□□□ -2.07
VTA1Q9NP79 RNU7-12P-201ENST00000516030 62 ntBASIC2.1□□□□□ -2.07
VTA1Q9NP79 AC022559.1-201ENST00000520905 205 ntBASIC2.1□□□□□ -2.07
VTA1Q9NP79 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
VTA1Q9NP79 AC006441.5-201ENST00000612680 209 ntBASIC2.1□□□□□ -2.07
VTA1Q9NP79 AC084768.2-201ENST00000622736 221 ntBASIC2.1□□□□□ -2.07
VTA1Q9NP79 SNORD24-201ENST00000383884 75 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 RNU6-484P-201ENST00000384016 107 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 RNU6-643P-201ENST00000384018 107 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 MIR194-1-201ENST00000384892 85 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 MIR452-201ENST00000385020 85 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VTA1Q9NP79 MIR1267-201ENST00000408723 78 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 AC004965.1-201ENST00000413033 213 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 RNU6-717P-201ENST00000459076 104 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 AC114811.1-201ENST00000507207 168 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 AC107027.2-201ENST00000512197 115 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 RNU6-504P-201ENST00000516568 104 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms