Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 Y_RNA.235-201ENST00000364412 102 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 Y_RNA.306-201ENST00000365015 102 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 Y_RNA.312-201ENST00000365089 102 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 Y_RNA.322-201ENST00000365151 102 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 RNA5SP496-201ENST00000391240 109 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 MIR1304-201ENST00000408243 91 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 SNORD2.1-201ENST00000458762 69 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 Y_RNA.650-201ENST00000459002 102 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 Y_RNA.777-201ENST00000516982 102 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 MIR4303-201ENST00000581299 66 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 Y_RNA.771-201ENST00000598668 102 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 AL049861.1-201ENST00000603130 150 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 AL357312.1-201ENST00000603879 298 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 AL021707.8-201ENST00000609428 183 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 Y_RNA.789-201ENST00000622480 102 ntBASIC1.59□□□□□ -2.15
ARFGAP3Q9NP61 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ARFGAP3Q9NP61 Y_RNA.24-201ENST00000362508 103 ntBASIC1.58□□□□□ -2.16
ARFGAP3Q9NP61 SNORA8.3-201ENST00000384679 139 ntBASIC1.58□□□□□ -2.16
ARFGAP3Q9NP61 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
ARFGAP3Q9NP61 RNU6-955P-201ENST00000410497 104 ntBASIC1.58□□□□□ -2.16
ARFGAP3Q9NP61 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.58□□□□□ -2.16
ARFGAP3Q9NP61 RNU6-237P-201ENST00000515985 71 ntBASIC1.58□□□□□ -2.16
ARFGAP3Q9NP61 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.58□□□□□ -2.16
ARFGAP3Q9NP61 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.58□□□□□ -2.16
ARFGAP3Q9NP61 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.58□□□□□ -2.16
ARFGAP3Q9NP61 Y_RNA.277-201ENST00000364754 102 ntBASIC1.57□□□□□ -2.16
ARFGAP3Q9NP61 SNORD38C-201ENST00000384381 69 ntBASIC1.57□□□□□ -2.16
ARFGAP3Q9NP61 RNU6-1132P-201ENST00000459214 107 ntBASIC1.57□□□□□ -2.16
ARFGAP3Q9NP61 RNA5SP61-201ENST00000516453 100 ntBASIC1.57□□□□□ -2.16
ARFGAP3Q9NP61 AL645939.4-201ENST00000604495 135 ntBASIC1.57□□□□□ -2.16
ARFGAP3Q9NP61 uc_338.4-201ENST00000616635 176 ntBASIC1.57□□□□□ -2.16
ARFGAP3Q9NP61 MIR8065-201ENST00000620577 100 ntBASIC1.57□□□□□ -2.16
ARFGAP3Q9NP61 Y_RNA.122-201ENST00000363331 96 ntBASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 Y_RNA.572-201ENST00000384757 98 ntBASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 MIR15B-201ENST00000385045 98 ntBASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 MIR548H3-201ENST00000408771 118 ntBASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 SNRPGP14-201ENST00000435400 219 ntBASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 Y_RNA.668-201ENST00000516233 93 ntBASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 SNORD111.1-201ENST00000516421 86 ntBASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 SNORA18.7-201ENST00000516910 131 ntBASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 AC100767.1-201ENST00000528178 123 ntBASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 MIR4643-201ENST00000577473 78 ntBASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 MIR5688-201ENST00000580619 83 ntBASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ARFGAP3Q9NP61 RNU6-268P-201ENST00000364174 107 ntBASIC1.55□□□□□ -2.16
ARFGAP3Q9NP61 Y_RNA.242-201ENST00000364473 110 ntBASIC1.55□□□□□ -2.16
ARFGAP3Q9NP61 SNORD26-201ENST00000384147 75 ntBASIC1.55□□□□□ -2.16
ARFGAP3Q9NP61 RNU6-196P-201ENST00000384315 107 ntBASIC1.55□□□□□ -2.16
ARFGAP3Q9NP61 AC108667.1-201ENST00000428618 249 ntBASIC1.55□□□□□ -2.16
ARFGAP3Q9NP61 RPL39P39-201ENST00000455840 151 ntBASIC1.55□□□□□ -2.16
ARFGAP3Q9NP61 AC245047.8-201ENST00000456455 284 ntBASIC1.55□□□□□ -2.16
ARFGAP3Q9NP61 RNU7-149P-201ENST00000516739 59 ntBASIC1.55□□□□□ -2.16
ARFGAP3Q9NP61 MIR4282-201ENST00000583613 67 ntBASIC1.55□□□□□ -2.16
ARFGAP3Q9NP61 U4.1-201ENST00000620349 87 ntBASIC1.55□□□□□ -2.16
ARFGAP3Q9NP61 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
ARFGAP3Q9NP61 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
ARFGAP3Q9NP61 Y_RNA.562-201ENST00000384695 113 ntBASIC1.54□□□□□ -2.16
ARFGAP3Q9NP61 MIR626-201ENST00000385032 94 ntBASIC1.54□□□□□ -2.16
ARFGAP3Q9NP61 RNU6-482P-201ENST00000391068 107 ntBASIC1.54□□□□□ -2.16
ARFGAP3Q9NP61 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
ARFGAP3Q9NP61 SNORA74.3-201ENST00000517108 154 ntBASIC1.54□□□□□ -2.16
ARFGAP3Q9NP61 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
ARFGAP3Q9NP61 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ARFGAP3Q9NP61 RNU4-62P-201ENST00000410125 130 ntBASIC1.53□□□□□ -2.16
ARFGAP3Q9NP61 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.53□□□□□ -2.16
ARFGAP3Q9NP61 Y_RNA.638-201ENST00000459374 113 ntBASIC1.53□□□□□ -2.16
ARFGAP3Q9NP61 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
ARFGAP3Q9NP61 MIR4503-201ENST00000582187 83 ntBASIC1.53□□□□□ -2.16
ARFGAP3Q9NP61 AL162730.1-201ENST00000605734 292 ntBASIC1.53□□□□□ -2.16
ARFGAP3Q9NP61 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.16
ARFGAP3Q9NP61 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.53□□□□□ -2.16
ARFGAP3Q9NP61 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.53□□□□□ -2.16
ARFGAP3Q9NP61 AL442644.1-201ENST00000454390 3105 ntBASIC1.53□□□□□ -2.17
ARFGAP3Q9NP61 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 SNORD27-201ENST00000363981 72 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 Y_RNA.229-201ENST00000364347 113 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 Y_RNA.416-201ENST00000384014 113 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 RNU6-574P-201ENST00000384265 107 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 Y_RNA.477-201ENST00000384352 108 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 Y_RNA.587-201ENST00000391210 103 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 SNORD123-201ENST00000459473 70 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 DNAJC19P9-201ENST00000555084 351 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 AC062037.2-201ENST00000610137 73 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 AL096861.1-201ENST00000610899 123 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 AC006441.5-201ENST00000612680 209 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 Pinc.1-201ENST00000616452 154 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 AL365265.1-201ENST00000621045 234 ntBASIC1.52□□□□□ -2.17
ARFGAP3Q9NP61 RNA5SP327-201ENST00000362494 101 ntBASIC1.51□□□□□ -2.17
ARFGAP3Q9NP61 Y_RNA.76-201ENST00000362931 109 ntBASIC1.51□□□□□ -2.17
ARFGAP3Q9NP61 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
ARFGAP3Q9NP61 RNU6-702P-201ENST00000364982 107 ntBASIC1.51□□□□□ -2.17
ARFGAP3Q9NP61 Y_RNA.304-201ENST00000365011 112 ntBASIC1.51□□□□□ -2.17
ARFGAP3Q9NP61 MIR520C-201ENST00000385005 87 ntBASIC1.51□□□□□ -2.17
ARFGAP3Q9NP61 SNORA31.2-201ENST00000516019 134 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms