Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 Y_RNA.199-201ENST00000364014 102 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.229-201ENST00000364347 113 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 RNU6-923P-201ENST00000364753 107 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 RNU6-144P-201ENST00000383951 107 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 MIR150-201ENST00000385048 84 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 MIR522-201ENST00000385071 87 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 MT-TT-201ENST00000387460 66 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 RNU6-493P-201ENST00000391321 108 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.54□□□□□ -2.16
UPF2Q9HAU5 CALM2P4-201ENST00000430810 426 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 SNRPGP10-201ENST00000432323 225 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 AC069257.2-201ENST00000441819 155 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 STAG3L5P-204ENST00000443759 179 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 snoU13.27-201ENST00000459278 104 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 RNU6-1116P-201ENST00000517269 99 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 AC022559.1-201ENST00000520905 205 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 MIR4762-201ENST00000585261 75 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.54□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.802-201ENST00000614892 130 ntBASIC1.54□□□□□ -2.16
UPF2Q9HAU5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.83-201ENST00000363005 113 ntBASIC1.53□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.140-201ENST00000363474 103 ntBASIC1.53□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.262-201ENST00000364641 102 ntBASIC1.53□□□□□ -2.16
UPF2Q9HAU5 MIR562-201ENST00000384894 95 ntBASIC1.53□□□□□ -2.16
UPF2Q9HAU5 U8.16-201ENST00000391279 133 ntBASIC1.53□□□□□ -2.16
UPF2Q9HAU5 RNU2-7P-201ENST00000410794 178 ntBASIC1.53□□□□□ -2.16
UPF2Q9HAU5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.53□□□□□ -2.16
UPF2Q9HAU5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.53□□□□□ -2.16
UPF2Q9HAU5 AC245047.8-201ENST00000456455 284 ntBASIC1.53□□□□□ -2.16
UPF2Q9HAU5 snoU13.9-201ENST00000458927 103 ntBASIC1.53□□□□□ -2.16
UPF2Q9HAU5 HMGN1P7-201ENST00000491722 313 ntBASIC1.53□□□□□ -2.16
UPF2Q9HAU5 AC090821.2-201ENST00000523552 176 ntBASIC1.53□□□□□ -2.16
UPF2Q9HAU5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.53□□□□□ -2.16
UPF2Q9HAU5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.53□□□□□ -2.16
UPF2Q9HAU5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.53□□□□□ -2.17
UPF2Q9HAU5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
UPF2Q9HAU5 U8.5-201ENST00000364528 136 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 Y_RNA.297-201ENST00000364950 91 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 RNU6-424P-201ENST00000384367 105 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 SNORA8.3-201ENST00000384679 139 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 Y_RNA.621-201ENST00000411065 96 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 COX6CP10-201ENST00000416832 224 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 AC108667.1-201ENST00000428618 249 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 RNU6-561P-201ENST00000516222 102 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 RNU2-56P-201ENST00000516826 190 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 RPL23AP91-201ENST00000569211 455 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 SNORA77B-201ENST00000578179 125 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 MIR4724-201ENST00000579485 89 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 ZNF209P-201ENST00000593450 2304 ntBASIC1.52□□□□□ -2.17
UPF2Q9HAU5 RNU6-360P-201ENST00000390944 104 ntBASIC1.51□□□□□ -2.17
UPF2Q9HAU5 MIR1267-201ENST00000408723 78 ntBASIC1.51□□□□□ -2.17
UPF2Q9HAU5 RNU6-847P-201ENST00000411115 108 ntBASIC1.51□□□□□ -2.17
UPF2Q9HAU5 AC005908.1-201ENST00000468701 347 ntBASIC1.51□□□□□ -2.17
UPF2Q9HAU5 RNA5SP481-201ENST00000516814 122 ntBASIC1.51□□□□□ -2.17
UPF2Q9HAU5 AP000942.3-201ENST00000603702 160 ntBASIC1.51□□□□□ -2.17
UPF2Q9HAU5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.5□□□□□ -2.17
UPF2Q9HAU5 MIR367-201ENST00000362299 68 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 SNORD50B-201ENST00000364995 70 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 RNU4-17P-201ENST00000365598 141 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 Y_RNA.515-201ENST00000384535 112 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 SNORD72-201ENST00000390994 80 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 RN7SKP200-201ENST00000410564 320 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 FTH1P12-201ENST00000432137 551 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.5□□□□□ -2.17
UPF2Q9HAU5 Y_RNA.644-201ENST00000459006 113 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.5□□□□□ -2.17
UPF2Q9HAU5 RNA5SP458-201ENST00000516188 119 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 Y_RNA.674-201ENST00000516362 113 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 RNA5SP168-201ENST00000516642 112 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.5□□□□□ -2.17
UPF2Q9HAU5 MIR4709-201ENST00000577272 72 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 MIR5688-201ENST00000580619 83 ntBASIC1.5□□□□□ -2.17
UPF2Q9HAU5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
UPF2Q9HAU5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
UPF2Q9HAU5 SNORD68-201ENST00000363214 84 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 Y_RNA.265-201ENST00000364677 108 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 Y_RNA.785-201ENST00000384290 109 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 MIR616-201ENST00000385293 97 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 RNU11-5P-201ENST00000391216 129 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 RNA5SP482-201ENST00000391269 118 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 RNU2-64P-201ENST00000411315 191 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 SNRPGP14-201ENST00000435400 219 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.49□□□□□ -2.17
UPF2Q9HAU5 RNU7-34P-201ENST00000459394 64 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 AC004223.1-201ENST00000479840 271 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.49□□□□□ -2.17
UPF2Q9HAU5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.49□□□□□ -2.17
UPF2Q9HAU5 AL049861.1-201ENST00000603130 150 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 RNU2-4P-201ENST00000606190 192 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 AL442644.1-201ENST00000454390 3105 ntBASIC1.49□□□□□ -2.17
UPF2Q9HAU5 RNU6-682P-201ENST00000363843 106 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 RNU6-484P-201ENST00000384016 107 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 Y_RNA.435-201ENST00000384095 112 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 Y_RNA.571-201ENST00000384753 98 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 MT-TR-201ENST00000387439 65 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 MIR1285-1-201ENST00000408593 84 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 RNU4-62P-201ENST00000410125 130 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 281.2 ms