Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6-772P-201ENST00000516042 105 ntBASIC2.03□□□□□ -2.08
EBF3Q9H4W6 SNORD77.4-201ENST00000516158 81 ntBASIC2.03□□□□□ -2.08
EBF3Q9H4W6 AC090049.2-201ENST00000550377 109 ntBASIC2.03□□□□□ -2.08
EBF3Q9H4W6 AL160236.1-201ENST00000556317 195 ntBASIC2.03□□□□□ -2.08
EBF3Q9H4W6 uc_338.4-201ENST00000616635 176 ntBASIC2.03□□□□□ -2.08
EBF3Q9H4W6 ZNF355P-201ENST00000427301 3216 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.02□□□□□ -2.09
EBF3Q9H4W6 RNU4-13P-201ENST00000364019 141 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 Y_RNA.634-201ENST00000364811 113 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 RNU6-1144P-201ENST00000384247 104 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 RNU6-476P-201ENST00000384726 107 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 MIR562-201ENST00000384894 95 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 SNORD23.1-201ENST00000408212 104 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 RNU2-55P-201ENST00000411146 174 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 MLLT10P1-201ENST00000418346 262 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.02□□□□□ -2.09
EBF3Q9H4W6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.02□□□□□ -2.09
EBF3Q9H4W6 RNU1-131P-201ENST00000458943 161 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 RPS27P21-201ENST00000486977 252 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 PDCD5P2-201ENST00000507570 312 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 RNA5SP182-201ENST00000516064 82 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 RNU6-1299P-201ENST00000516316 100 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 AC090142.3-201ENST00000519012 385 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 MIR5089-201ENST00000580047 84 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 MIR4438-201ENST00000585271 93 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 AC097639.2-201ENST00000603159 172 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 SNORD14A-201ENST00000606526 91 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 MIR3914-2-201ENST00000637339 95 ntBASIC2.02□□□□□ -2.09
EBF3Q9H4W6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
EBF3Q9H4W6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
EBF3Q9H4W6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
EBF3Q9H4W6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
EBF3Q9H4W6 SNORA3A-201ENST00000364113 130 ntBASIC2.01□□□□□ -2.09
EBF3Q9H4W6 RNU6-1164P-201ENST00000364428 107 ntBASIC2.01□□□□□ -2.09
EBF3Q9H4W6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
EBF3Q9H4W6 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
EBF3Q9H4W6 SNORA79-201ENST00000408376 140 ntBASIC2.01□□□□□ -2.09
EBF3Q9H4W6 AC060773.1-201ENST00000421698 310 ntBASIC2.01□□□□□ -2.09
EBF3Q9H4W6 AL158147.1-201ENST00000443970 75 ntBASIC2.01□□□□□ -2.09
EBF3Q9H4W6 RN7SL274P-201ENST00000492268 272 ntBASIC2.01□□□□□ -2.09
EBF3Q9H4W6 RNU7-172P-201ENST00000517125 64 ntBASIC2.01□□□□□ -2.09
EBF3Q9H4W6 CYCSP26-201ENST00000534107 320 ntBASIC2.01□□□□□ -2.09
EBF3Q9H4W6 AC011604.1-201ENST00000545978 196 ntBASIC2.01□□□□□ -2.09
EBF3Q9H4W6 MIR3121-201ENST00000579680 77 ntBASIC2.01□□□□□ -2.09
EBF3Q9H4W6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.01□□□□□ -2.09
EBF3Q9H4W6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
EBF3Q9H4W6 RNU6-1298P-201ENST00000362456 101 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 Y_RNA.114-201ENST00000363265 113 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 RNU6-309P-201ENST00000364573 106 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 Y_RNA.486-201ENST00000384398 107 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 RNU1-148P-201ENST00000384472 162 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 MIR1262-201ENST00000408276 93 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 AL353689.1-201ENST00000438895 199 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 AC003989.2-201ENST00000440224 169 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 NDUFA4P2-201ENST00000489989 244 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 RN7SKP179-201ENST00000516126 217 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 SNORD33.1-201ENST00000516213 88 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 RNU6-589P-201ENST00000516485 107 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 RNA5SP153-201ENST00000516498 76 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 RNU7-128P-201ENST00000517247 62 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 AC007751.1-201ENST00000529260 376 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 AC108081.1-201ENST00000604358 221 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 MTND5P32-201ENST00000560711 1802 ntBASIC2□□□□□ -2.09
EBF3Q9H4W6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2□□□□□ -2.09
EBF3Q9H4W6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2□□□□□ -2.09
EBF3Q9H4W6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
EBF3Q9H4W6 Y_RNA.120-201ENST00000363304 110 ntBASIC1.99□□□□□ -2.09
EBF3Q9H4W6 AL356379.1-201ENST00000414105 126 ntBASIC1.99□□□□□ -2.09
EBF3Q9H4W6 RNU7-149P-201ENST00000516739 59 ntBASIC1.99□□□□□ -2.09
EBF3Q9H4W6 Y_RNA.709-201ENST00000516952 92 ntBASIC1.99□□□□□ -2.09
EBF3Q9H4W6 AC026271.5-201ENST00000577873 130 ntBASIC1.99□□□□□ -2.09
EBF3Q9H4W6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.99□□□□□ -2.09
EBF3Q9H4W6 AC131055.1-201ENST00000584626 316 ntBASIC1.99□□□□□ -2.09
EBF3Q9H4W6 AL353149.1-201ENST00000610667 244 ntBASIC1.99□□□□□ -2.09
EBF3Q9H4W6 U6.73-201ENST00000619194 103 ntBASIC1.99□□□□□ -2.09
EBF3Q9H4W6 Y_RNA.66-201ENST00000362862 102 ntBASIC1.98□□□□□ -2.09
EBF3Q9H4W6 RNU1-96P-201ENST00000364163 162 ntBASIC1.98□□□□□ -2.09
EBF3Q9H4W6 RNU6-160P-201ENST00000384591 107 ntBASIC1.98□□□□□ -2.09
EBF3Q9H4W6 RNU2-70P-201ENST00000410718 179 ntBASIC1.98□□□□□ -2.09
EBF3Q9H4W6 HMGN2P34-201ENST00000437647 269 ntBASIC1.98□□□□□ -2.09
EBF3Q9H4W6 AC011406.1-201ENST00000512440 370 ntBASIC1.98□□□□□ -2.09
EBF3Q9H4W6 RNU6-1146P-201ENST00000516282 102 ntBASIC1.98□□□□□ -2.09
EBF3Q9H4W6 RNU6-781P-201ENST00000516377 101 ntBASIC1.98□□□□□ -2.09
EBF3Q9H4W6 RNU6-1096P-201ENST00000517089 102 ntBASIC1.98□□□□□ -2.09
EBF3Q9H4W6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.98□□□□□ -2.09
EBF3Q9H4W6 MTND5P34-201ENST00000568888 325 ntBASIC1.98□□□□□ -2.09
EBF3Q9H4W6 Pinc.1-201ENST00000616452 154 ntBASIC1.98□□□□□ -2.09
EBF3Q9H4W6 U6.108-201ENST00000637764 58 ntBASIC1.98□□□□□ -2.09
EBF3Q9H4W6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
EBF3Q9H4W6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
EBF3Q9H4W6 SNORD114-6-201ENST00000364393 72 ntBASIC1.97□□□□□ -2.09
EBF3Q9H4W6 RNU6-1138P-201ENST00000365359 106 ntBASIC1.97□□□□□ -2.09
EBF3Q9H4W6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.97□□□□□ -2.09
EBF3Q9H4W6 SNORA1-201ENST00000384107 130 ntBASIC1.97□□□□□ -2.09
EBF3Q9H4W6 Y_RNA.617-201ENST00000410920 90 ntBASIC1.97□□□□□ -2.09
EBF3Q9H4W6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.97□□□□□ -2.09
EBF3Q9H4W6 Y_RNA.651-201ENST00000459380 103 ntBASIC1.97□□□□□ -2.09
EBF3Q9H4W6 Y_RNA.692-201ENST00000516627 105 ntBASIC1.97□□□□□ -2.09
EBF3Q9H4W6 MIR514B-201ENST00000516774 80 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 264.5 ms