Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RNU6-1143P-201ENST00000516125 104 ntBASIC0.9□□□□□ -2.27
NXF3Q9H4D5 RNU6-764P-201ENST00000516396 105 ntBASIC0.9□□□□□ -2.27
NXF3Q9H4D5 DEFB108E-201ENST00000524692 240 ntBASIC0.9□□□□□ -2.27
NXF3Q9H4D5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.9□□□□□ -2.27
NXF3Q9H4D5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.9□□□□□ -2.27
NXF3Q9H4D5 AL022345.2-201ENST00000606307 135 ntBASIC0.9□□□□□ -2.27
NXF3Q9H4D5 BX284668.6-201ENST00000606899 438 ntBASIC0.9□□□□□ -2.27
NXF3Q9H4D5 AC108706.1-201ENST00000611053 297 ntBASIC0.9□□□□□ -2.27
NXF3Q9H4D5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
NXF3Q9H4D5 AL442644.1-201ENST00000454390 3105 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 RNU6-674P-201ENST00000363831 107 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 Y_RNA.210-201ENST00000364161 110 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 RNU6-290P-201ENST00000365212 101 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 RNU6-969P-201ENST00000383900 105 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 SNORA72.4-201ENST00000384174 132 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
NXF3Q9H4D5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 MIR1278-201ENST00000408753 81 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 RPL21P38-201ENST00000418090 167 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 MLLT10P1-201ENST00000418346 262 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.89□□□□□ -2.27
NXF3Q9H4D5 SNRPGP10-201ENST00000432323 225 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 RNU7-141P-201ENST00000459304 62 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 SNORA31.4-201ENST00000516049 129 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 Y_RNA.714-201ENST00000517065 90 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.89□□□□□ -2.27
NXF3Q9H4D5 AL357312.1-201ENST00000603879 298 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.89□□□□□ -2.27
NXF3Q9H4D5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.89□□□□□ -2.27
NXF3Q9H4D5 AC134026.1-201ENST00000623249 2239 ntBASIC0.89□□□□□ -2.27
NXF3Q9H4D5 AC068700.1-201ENST00000565862 3754 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 Y_RNA.19-201ENST00000362462 99 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 snoU2_19.2-201ENST00000363024 80 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 Y_RNA.153-201ENST00000363615 91 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 SNORD50B-201ENST00000364995 70 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 snoU2-30.1-201ENST00000365012 70 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 RNU6-639P-201ENST00000384074 107 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 MIR452-201ENST00000385020 85 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
NXF3Q9H4D5 SNORD12-201ENST00000391002 90 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 RNU6-131P-201ENST00000391144 107 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 MIR1298-201ENST00000408783 112 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 RNU6-1054P-201ENST00000411293 104 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 MTCO1P5-201ENST00000433573 344 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 HMGN2P32-201ENST00000444648 269 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 MTND4LP30-201ENST00000454092 297 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 MTND5P22-201ENST00000458380 195 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 RPL23AP54-201ENST00000495129 419 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 RNY3P15-201ENST00000516297 97 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 SNORD45.4-201ENST00000516629 73 ntBASIC0.88□□□□□ -2.27
NXF3Q9H4D5 RNU6-1084P-201ENST00000362498 107 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 Y_RNA.336-201ENST00000365307 109 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 RNU6-326P-201ENST00000365480 107 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 Y_RNA.541-201ENST00000384640 113 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 SNORA26.5-201ENST00000391215 123 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 SNORA36B-201ENST00000410438 131 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 AC004941.2-201ENST00000427009 228 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 AL731563.1-201ENST00000442202 214 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 RNU6-437P-201ENST00000459408 95 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 RNU2-31P-201ENST00000516954 155 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 MIR2681-201ENST00000581814 105 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 MIR4661-201ENST00000582720 75 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.87□□□□□ -2.27
NXF3Q9H4D5 AC007742.2-201ENST00000618226 398 ntBASIC0.87□□□□□ -2.27
NXF3Q9H4D5 Y_RNA.64-201ENST00000362845 102 ntBASIC0.86□□□□□ -2.27
NXF3Q9H4D5 RNU6-1209P-201ENST00000363655 107 ntBASIC0.86□□□□□ -2.27
NXF3Q9H4D5 RNU6-899P-201ENST00000363947 107 ntBASIC0.86□□□□□ -2.27
NXF3Q9H4D5 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
NXF3Q9H4D5 Y_RNA.422-201ENST00000384054 114 ntBASIC0.86□□□□□ -2.27
NXF3Q9H4D5 AC113618.1-201ENST00000416747 285 ntBASIC0.86□□□□□ -2.27
NXF3Q9H4D5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.86□□□□□ -2.27
NXF3Q9H4D5 MRPS35P2-201ENST00000508242 191 ntBASIC0.86□□□□□ -2.27
NXF3Q9H4D5 RNU6-947P-201ENST00000516264 106 ntBASIC0.86□□□□□ -2.27
NXF3Q9H4D5 SNORA70.22-201ENST00000517160 124 ntBASIC0.86□□□□□ -2.27
NXF3Q9H4D5 AP003733.2-201ENST00000529409 171 ntBASIC0.86□□□□□ -2.27
NXF3Q9H4D5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.86□□□□□ -2.27
NXF3Q9H4D5 AC087685.1-201ENST00000587507 141 ntBASIC0.86□□□□□ -2.27
NXF3Q9H4D5 JPX_2.1-201ENST00000614161 69 ntBASIC0.86□□□□□ -2.27
NXF3Q9H4D5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
NXF3Q9H4D5 Y_RNA.16-201ENST00000362421 102 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 RNU6-144P-201ENST00000383951 107 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 Y_RNA.512-201ENST00000384518 102 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 MIR19B1-201ENST00000384829 87 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 MIR516B2-201ENST00000385190 85 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 RNU6-763P-201ENST00000390865 106 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 SNORA53-201ENST00000391141 249 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 RPL39P39-201ENST00000455840 151 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 Y_RNA.637-201ENST00000459424 114 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 AC090142.3-201ENST00000519012 385 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 AC005357.1-201ENST00000588399 301 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 AL512605.2-201ENST00000592972 256 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
NXF3Q9H4D5 AC022140.2-201ENST00000623500 188 ntBASIC0.85□□□□□ -2.27
NXF3Q9H4D5 RNY1-201ENST00000364228 113 ntBASIC0.84□□□□□ -2.27
NXF3Q9H4D5 MIR136-201ENST00000385207 82 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 189.8 ms