Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 RNU2-14P-201ENST00000411053 191 ntBASIC1.33□□□□□ -2.2
PCDH11YQ9BZA8 RPS27P16-201ENST00000425758 201 ntBASIC1.33□□□□□ -2.2
PCDH11YQ9BZA8 MTATP8P1-201ENST00000467115 207 ntBASIC1.33□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-1338P-201ENST00000516328 91 ntBASIC1.33□□□□□ -2.2
PCDH11YQ9BZA8 MIR2681-201ENST00000581814 105 ntBASIC1.33□□□□□ -2.2
PCDH11YQ9BZA8 AC106754.2-201ENST00000623006 233 ntBASIC1.33□□□□□ -2.2
PCDH11YQ9BZA8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-1048P-201ENST00000364054 107 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 MIR532-201ENST00000385025 91 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 SNORA26.5-201ENST00000391215 123 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 SNORA36B-201ENST00000410438 131 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-1203P-201ENST00000410703 110 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 MLLT10P1-201ENST00000418346 262 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 SNRPGP10-201ENST00000432323 225 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-437P-201ENST00000459408 95 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 AC091959.1-201ENST00000495857 238 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 SERF1AP1-201ENST00000514575 187 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 SNORA27.4-201ENST00000516650 95 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-570P-201ENST00000517051 105 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 AL513534.2-201ENST00000603836 250 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 JPX_2.1-201ENST00000614161 69 ntBASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.32□□□□□ -2.2
PCDH11YQ9BZA8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 Y_RNA.16-201ENST00000362421 102 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-674P-201ENST00000363831 107 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 SNORA2.2-201ENST00000365473 135 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 MIR653-201ENST00000385279 96 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-763P-201ENST00000390865 106 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-131P-201ENST00000391144 107 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 MTCO2P33-201ENST00000402100 465 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 MIR548F4-201ENST00000408515 105 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 PIGPP3-201ENST00000425307 415 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 AC093850.1-201ENST00000454121 251 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 TRBVB-201ENST00000477100 408 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 RPL30P7-201ENST00000479312 323 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 AC114811.1-201ENST00000507207 168 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-322P-201ENST00000516010 103 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-1116P-201ENST00000517269 99 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 AC090049.2-201ENST00000550377 109 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 AL117187.1-201ENST00000555482 181 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 AC007742.2-201ENST00000618226 398 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 U6.104-201ENST00000637979 90 ntBASIC1.31□□□□□ -2.2
PCDH11YQ9BZA8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 AC134026.1-201ENST00000623249 2239 ntBASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-1084P-201ENST00000362498 107 ntBASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 Y_RNA.176-201ENST00000363815 109 ntBASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-969P-201ENST00000383900 105 ntBASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-144P-201ENST00000383951 107 ntBASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 Y_RNA.574-201ENST00000384766 95 ntBASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 AL512310.8-201ENST00000550183 120 ntBASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 AC005357.1-201ENST00000588399 301 ntBASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 AP001485.1-201ENST00000604799 199 ntBASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 MIR6857-201ENST00000613267 93 ntBASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 MIR8062-201ENST00000621515 85 ntBASIC1.3□□□□□ -2.2
PCDH11YQ9BZA8 UBE2WP1-201ENST00000362030 340 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-1272P-201ENST00000362776 107 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-238P-201ENST00000363313 106 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 snoU2-30.1-201ENST00000365012 70 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 Y_RNA.376-201ENST00000365638 108 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 Y_RNA.459-201ENST00000384251 102 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 AL451046.2-201ENST00000403074 277 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 MIR1285-1-201ENST00000408593 84 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 HMGN2P32-201ENST00000444648 269 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 RN7SKP179-201ENST00000516126 217 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 DEFB108E-201ENST00000524692 240 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 MIR5000-201ENST00000577717 103 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 MIR3664-201ENST00000579074 99 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 MIR3973-201ENST00000579824 107 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 AC087685.1-201ENST00000587507 141 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 AL360085.1-201ENST00000604713 532 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 AC013791.1-201ENST00000616619 62 ntBASIC1.29□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-1205P-201ENST00000363625 106 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 Y_RNA.217-201ENST00000364214 105 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 Y_RNA.512-201ENST00000384518 102 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 MIR452-201ENST00000385020 85 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 MIR1302-6-201ENST00000408466 90 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 Y_RNA.641-201ENST00000459414 105 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 Y_RNA.637-201ENST00000459424 114 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-917P-201ENST00000516294 104 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 SNORD45.4-201ENST00000516629 73 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 RNU6-922P-201ENST00000516753 99 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 SCARNA24.2-201ENST00000516968 130 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 GHRLOS.1-201ENST00000610995 70 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 AP001282.2-201ENST00000616149 309 ntBASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.28□□□□□ -2.2
PCDH11YQ9BZA8 MIR335-201ENST00000362173 94 ntBASIC1.27□□□□□ -2.21
PCDH11YQ9BZA8 RNU6-1209P-201ENST00000363655 107 ntBASIC1.27□□□□□ -2.21
PCDH11YQ9BZA8 RNU6-662P-201ENST00000384253 104 ntBASIC1.27□□□□□ -2.21
PCDH11YQ9BZA8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
PCDH11YQ9BZA8 BTF3P11-201ENST00000426582 477 ntBASIC1.27□□□□□ -2.21
PCDH11YQ9BZA8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.27□□□□□ -2.21
PCDH11YQ9BZA8 RNU6-327P-201ENST00000516270 127 ntBASIC1.27□□□□□ -2.21
PCDH11YQ9BZA8 RNU6-1007P-201ENST00000516586 107 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms