Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.37□□□□□ -2.03
TRIM55Q9BYV6 SNORD3E-202ENST00000627253 216 ntBASIC2.37□□□□□ -2.03
TRIM55Q9BYV6 MIR194-1-201ENST00000384892 85 ntBASIC2.36□□□□□ -2.03
TRIM55Q9BYV6 MIR378D2-201ENST00000580636 98 ntBASIC2.36□□□□□ -2.03
TRIM55Q9BYV6 MIR3910-1-201ENST00000580936 111 ntBASIC2.36□□□□□ -2.03
TRIM55Q9BYV6 AC095038.3-201ENST00000634439 195 ntBASIC2.36□□□□□ -2.03
TRIM55Q9BYV6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.36□□□□□ -2.03
TRIM55Q9BYV6 Y_RNA.66-201ENST00000362862 102 ntBASIC2.35□□□□□ -2.03
TRIM55Q9BYV6 RNU6-268P-201ENST00000364174 107 ntBASIC2.35□□□□□ -2.03
TRIM55Q9BYV6 JTBP1-201ENST00000441314 247 ntBASIC2.35□□□□□ -2.03
TRIM55Q9BYV6 UBL5P3-201ENST00000475112 231 ntBASIC2.35□□□□□ -2.03
TRIM55Q9BYV6 Y_RNA.666-201ENST00000516187 112 ntBASIC2.35□□□□□ -2.03
TRIM55Q9BYV6 RNU7-121P-201ENST00000516604 62 ntBASIC2.35□□□□□ -2.03
TRIM55Q9BYV6 MIR4778-201ENST00000577635 80 ntBASIC2.35□□□□□ -2.03
TRIM55Q9BYV6 AC006441.5-201ENST00000612680 209 ntBASIC2.35□□□□□ -2.03
TRIM55Q9BYV6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM55Q9BYV6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM55Q9BYV6 RNU6-1123P-201ENST00000362347 106 ntBASIC2.34□□□□□ -2.03
TRIM55Q9BYV6 Y_RNA.337-201ENST00000365312 102 ntBASIC2.34□□□□□ -2.03
TRIM55Q9BYV6 AL161935.2-201ENST00000414627 60 ntBASIC2.34□□□□□ -2.03
TRIM55Q9BYV6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.34□□□□□ -2.03
TRIM55Q9BYV6 AC093850.1-201ENST00000454121 251 ntBASIC2.34□□□□□ -2.03
TRIM55Q9BYV6 snoU13.15-201ENST00000459407 104 ntBASIC2.34□□□□□ -2.03
TRIM55Q9BYV6 AL627230.6-201ENST00000611129 280 ntBASIC2.34□□□□□ -2.03
TRIM55Q9BYV6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM55Q9BYV6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 SNORD24-201ENST00000383884 75 ntBASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 MIR504-201ENST00000385065 83 ntBASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 Y_RNA.580-201ENST00000391004 95 ntBASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 RNA5SP233-201ENST00000459153 113 ntBASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 AC104435.1-201ENST00000483483 166 ntBASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 RPS27P21-201ENST00000486977 252 ntBASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 RNU6-406P-201ENST00000516470 107 ntBASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 RNU6-504P-201ENST00000516568 104 ntBASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 AC103810.8-201ENST00000607347 118 ntBASIC2.33□□□□□ -2.04
TRIM55Q9BYV6 RNU6-978P-201ENST00000364371 103 ntBASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 SNORD61-201ENST00000384252 73 ntBASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 Y_RNA.521-201ENST00000384560 114 ntBASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 MIR1267-201ENST00000408723 78 ntBASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 AC004965.1-201ENST00000413033 213 ntBASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 SNRPGP13-201ENST00000442212 177 ntBASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 RNU6-237P-201ENST00000515985 71 ntBASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 RNA5SP272-201ENST00000516095 111 ntBASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 SNORD116-25-201ENST00000516517 92 ntBASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 RNU6-789P-201ENST00000517105 102 ntBASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 AC121758.2-201ENST00000553271 193 ntBASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM55Q9BYV6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 ICE2P2-201ENST00000483823 2787 ntBASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 RNU6-888P-201ENST00000363010 101 ntBASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 RNU6-151P-201ENST00000364158 107 ntBASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 RNU6-449P-201ENST00000383914 107 ntBASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 MIR548O-201ENST00000408583 114 ntBASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 RNA5SP425-201ENST00000410336 112 ntBASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 RN7SKP223-201ENST00000410582 62 ntBASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 AL392103.1-201ENST00000447000 198 ntBASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 AC007751.1-201ENST00000529260 376 ntBASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 MIR4524B-201ENST00000581569 115 ntBASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 MIR6840-201ENST00000611937 71 ntBASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
TRIM55Q9BYV6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 Y_RNA.393-201ENST00000383936 102 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 SNORD38C-201ENST00000384381 69 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 RNU6-768P-201ENST00000384683 107 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 MIR548A2-201ENST00000384956 97 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 MIR452-201ENST00000385020 85 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 AC015922.2-201ENST00000435593 184 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 AC234781.5-201ENST00000508429 271 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 RNU7-25P-201ENST00000516544 62 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 RNU6-1270P-201ENST00000517128 108 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 MIR4769-201ENST00000584126 77 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 DNAJC19P2-201ENST00000593340 302 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 MIR8074-201ENST00000615081 81 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 MIR1291-201ENST00000627649 87 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 MIR3658-201ENST00000636291 56 ntBASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
TRIM55Q9BYV6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM55Q9BYV6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
TRIM55Q9BYV6 AL359511.1-201ENST00000402970 211 ntBASIC2.29□□□□□ -2.04
TRIM55Q9BYV6 CYCSP49-201ENST00000420810 319 ntBASIC2.29□□□□□ -2.04
TRIM55Q9BYV6 AL606753.1-201ENST00000427435 87 ntBASIC2.29□□□□□ -2.04
TRIM55Q9BYV6 RPL23AP42-201ENST00000471152 471 ntBASIC2.29□□□□□ -2.04
TRIM55Q9BYV6 RNU6-693P-201ENST00000516134 107 ntBASIC2.29□□□□□ -2.04
TRIM55Q9BYV6 AC090142.3-201ENST00000519012 385 ntBASIC2.29□□□□□ -2.04
TRIM55Q9BYV6 SUMO2P16-201ENST00000519475 264 ntBASIC2.29□□□□□ -2.04
TRIM55Q9BYV6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
TRIM55Q9BYV6 SNORA77B-201ENST00000578179 125 ntBASIC2.29□□□□□ -2.04
TRIM55Q9BYV6 MIR4648-201ENST00000580107 72 ntBASIC2.29□□□□□ -2.04
TRIM55Q9BYV6 AC016717.2-201ENST00000609089 5141 ntBASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 AL442644.1-201ENST00000454390 3105 ntBASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 RNU6-597P-201ENST00000365620 102 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms