Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MIR4295-201ENST00000585286 85 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 POLR3GP1-201ENST00000594073 261 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 AP003357.1-201ENST00000604497 148 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 AL008718.3-201ENST00000610217 321 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 MIR6779-201ENST00000617283 64 ntBASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.93□□□□□ -2.26
RSPO3Q9BXY4 UBE2WP1-201ENST00000362030 340 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 MIR302D-201ENST00000362275 68 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 RNU6-740P-201ENST00000364734 105 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 SNORA22-201ENST00000383907 134 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 SNORA22C-201ENST00000384614 134 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 RNU6-713P-201ENST00000384761 107 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 MIR520G-201ENST00000385064 90 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 U8.16-201ENST00000391279 133 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 MTCO2P33-201ENST00000402100 465 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 RN7SKP200-201ENST00000410564 320 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 MRPL35P3-201ENST00000421557 364 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 CALM2P4-201ENST00000430810 426 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 JTBP1-201ENST00000441314 247 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 RNU7-94P-201ENST00000459576 63 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 RPS29P1-201ENST00000465274 159 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.668-201ENST00000516233 93 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 MIR4709-201ENST00000577272 72 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 AL162730.1-201ENST00000605734 292 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 AL591926.4-201ENST00000616895 298 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 MIR548AY-201ENST00000617669 107 ntBASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
RSPO3Q9BXY4 MIR335-201ENST00000362173 94 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 SNORA25.1-201ENST00000362326 128 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 RNU6-1272P-201ENST00000362776 107 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 RNU6-414P-201ENST00000363705 104 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 RNU4-10P-201ENST00000364383 140 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 SNORA72-201ENST00000384339 132 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 RNU6-1289P-201ENST00000384431 106 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.572-201ENST00000384757 98 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 SNORA53-201ENST00000391141 249 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 SNORA36B-201ENST00000410438 131 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 COX6CP10-201ENST00000416832 224 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 RNU7-34P-201ENST00000459394 64 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 RNA5SP168-201ENST00000516642 112 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 AP002004.2-201ENST00000531656 154 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 AC127455.1-201ENST00000565496 145 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 AC015688.6-201ENST00000577737 104 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 AL512605.2-201ENST00000592972 256 ntBASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.91□□□□□ -2.26
RSPO3Q9BXY4 Y_RNA.14-201ENST00000362415 103 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.76-201ENST00000362931 109 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.253-201ENST00000364562 112 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.265-201ENST00000364677 108 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.275-201ENST00000364726 110 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 RNU6-424P-201ENST00000384367 105 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.562-201ENST00000384695 113 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 snosnR66.1-201ENST00000391095 99 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 AL603910.2-201ENST00000407268 136 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 RNU6-383P-201ENST00000410864 94 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.621-201ENST00000411065 96 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 RPS27P16-201ENST00000425758 201 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 AC024067.1-201ENST00000426199 223 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 BTF3P11-201ENST00000426582 477 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 SNRPGP10-201ENST00000432323 225 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 AC093850.1-201ENST00000454121 251 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 RNU6-1132P-201ENST00000459214 107 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 RNU2-56P-201ENST00000516826 190 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 SUMO2P16-201ENST00000519475 264 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 AL358944.1-201ENST00000528537 144 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 MIR5692C2-201ENST00000577959 77 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 AC005357.1-201ENST00000588399 301 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 AC011921.3-201ENST00000605540 361 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 AL078604.3-201ENST00000615580 211 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 AC013791.1-201ENST00000616619 62 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.44-201ENST00000362676 108 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.203-201ENST00000364106 102 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.277-201ENST00000364754 102 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 SNORD1A-201ENST00000364968 72 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 RNU6-211P-201ENST00000384047 107 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 RNU6-463P-201ENST00000384340 107 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.477-201ENST00000384352 108 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.539-201ENST00000384635 107 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 MIR522-201ENST00000385071 87 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 RNU6-1248P-201ENST00000391096 64 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 AL034345.1-201ENST00000407768 123 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 MIR1267-201ENST00000408723 78 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 PGBD4P5-201ENST00000445958 426 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 NDUFA4P2-201ENST00000489989 244 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 RPL23AP54-201ENST00000495129 419 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 MIR4778-201ENST00000577635 80 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 U2.14-201ENST00000615943 113 ntBASIC0.89□□□□□ -2.27
RSPO3Q9BXY4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms