Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RN7SL594P-201ENST00000470590 287 ntBASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 RNA5SP112-201ENST00000515937 99 ntBASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 RNU2-58P-201ENST00000516403 183 ntBASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 MIR4781-201ENST00000585250 76 ntBASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 ZNF861P-201ENST00000588126 639 ntBASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 SEPT14P17-201ENST00000617978 177 ntBASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 RNA5SP322-201ENST00000363617 119 ntBASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 SNORA67.4-201ENST00000384688 142 ntBASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 SNORA80E-201ENST00000384744 137 ntBASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 RPL31P63-201ENST00000422565 375 ntBASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 RNA5SP33-201ENST00000516687 98 ntBASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 Y_RNA.788-201ENST00000622394 112 ntBASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL25A1Q9BXS0 AC005336.3-201ENST00000623833 2679 ntBASIC3.26□□□□□ -1.89
COL25A1Q9BXS0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL25A1Q9BXS0 MIR423-201ENST00000362201 94 ntBASIC3.26□□□□□ -1.89
COL25A1Q9BXS0 Y_RNA.494-201ENST00000384432 111 ntBASIC3.26□□□□□ -1.89
COL25A1Q9BXS0 RNU6-613P-201ENST00000410412 108 ntBASIC3.26□□□□□ -1.89
COL25A1Q9BXS0 AL445685.2-201ENST00000422551 342 ntBASIC3.26□□□□□ -1.89
COL25A1Q9BXS0 AC125388.1-201ENST00000459631 156 ntBASIC3.26□□□□□ -1.89
COL25A1Q9BXS0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.26□□□□□ -1.89
COL25A1Q9BXS0 AC002076.2-201ENST00000617362 122 ntBASIC3.26□□□□□ -1.89
COL25A1Q9BXS0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.26□□□□□ -1.89
COL25A1Q9BXS0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 RNU6-1244P-201ENST00000363614 108 ntBASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 Y_RNA.241-201ENST00000364470 117 ntBASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 RNU6-1319P-201ENST00000390855 104 ntBASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 RNU6-747P-201ENST00000390928 104 ntBASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 RNU6-241P-201ENST00000391148 104 ntBASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 RNU6-177P-201ENST00000411257 104 ntBASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 RNU7-45P-201ENST00000459460 63 ntBASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 TRBV12-2-201ENST00000489763 344 ntBASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 RNU1-142P-201ENST00000516682 145 ntBASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 MIR338-201ENST00000636369 67 ntBASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL25A1Q9BXS0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-37-201ENST00000363768 82 ntBASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 SNORD38.1-201ENST00000363863 68 ntBASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 HMGN2P3-201ENST00000433603 273 ntBASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 HMGN2P5-201ENST00000436882 273 ntBASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 HMGN2P16-201ENST00000456802 261 ntBASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 RNU6-1053P-201ENST00000515930 101 ntBASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 AL353149.1-201ENST00000610667 244 ntBASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 MIR6841-201ENST00000637129 72 ntBASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 AC009487.2-201ENST00000420969 6821 ntBASIC3.24□□□□□ -1.89
COL25A1Q9BXS0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-34-201ENST00000362441 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-12-201ENST00000362583 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-29-201ENST00000362834 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-9-201ENST00000362912 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-21-201ENST00000362963 81 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-14-201ENST00000363090 81 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-41-201ENST00000363608 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-11-201ENST00000363616 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-5-201ENST00000363633 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-39-201ENST00000363694 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-4-201ENST00000363810 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 RNU6-478P-201ENST00000363904 110 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-6-201ENST00000363942 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-42-201ENST00000364273 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-15-201ENST00000364809 81 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-26-201ENST00000365067 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-10-201ENST00000365073 81 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 Y_RNA.340-201ENST00000365330 92 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-43-201ENST00000365503 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 SNORD115-36-201ENST00000365629 82 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 RNU6-129P-201ENST00000391022 107 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 MIR1265-201ENST00000408444 86 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 RHEBP3-201ENST00000411920 351 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 AC090821.2-201ENST00000523552 176 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 AC107016.2-201ENST00000547968 190 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 AC103810.6-201ENST00000606708 136 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 ICE2P2-201ENST00000483823 2787 ntBASIC3.23□□□□□ -1.89
COL25A1Q9BXS0 Y_RNA.57-201ENST00000362806 113 ntBASIC3.22□□□□□ -1.89
COL25A1Q9BXS0 RNU6-546P-201ENST00000383991 107 ntBASIC3.22□□□□□ -1.89
COL25A1Q9BXS0 MIR512-1-201ENST00000384913 84 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms