Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MIR520A-201ENST00000384862 85 ntBASIC1.38□□□□□ -2.19
VGLL1Q99990 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.38□□□□□ -2.19
VGLL1Q99990 AC069257.2-201ENST00000441819 155 ntBASIC1.38□□□□□ -2.19
VGLL1Q99990 RNU6-346P-201ENST00000516288 111 ntBASIC1.38□□□□□ -2.19
VGLL1Q99990 RNA5SP153-201ENST00000516498 76 ntBASIC1.38□□□□□ -2.19
VGLL1Q99990 RNU6-197P-201ENST00000516680 100 ntBASIC1.38□□□□□ -2.19
VGLL1Q99990 RNU2-56P-201ENST00000516826 190 ntBASIC1.38□□□□□ -2.19
VGLL1Q99990 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.38□□□□□ -2.19
VGLL1Q99990 MIR4648-201ENST00000580107 72 ntBASIC1.38□□□□□ -2.19
VGLL1Q99990 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.38□□□□□ -2.19
VGLL1Q99990 JPX_2.1-201ENST00000614161 69 ntBASIC1.38□□□□□ -2.19
VGLL1Q99990 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.38□□□□□ -2.19
VGLL1Q99990 MIR3658-201ENST00000636291 56 ntBASIC1.38□□□□□ -2.19
VGLL1Q99990 AC245060.5-201ENST00000610778 3293 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 RNY1P11-201ENST00000363759 113 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 Y_RNA.634-201ENST00000364811 113 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 SNORD116-18-201ENST00000383961 92 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 RNU6-1031P-201ENST00000384773 107 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 RNA5SP482-201ENST00000391269 118 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.37□□□□□ -2.19
VGLL1Q99990 STAG3L5P-204ENST00000443759 179 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 AC107027.2-201ENST00000512197 115 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 RPL23AP94-201ENST00000512518 302 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 RNU7-28P-201ENST00000516759 62 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 SNORA31.17-201ENST00000516953 127 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.37□□□□□ -2.19
VGLL1Q99990 Pinc.1-201ENST00000616452 154 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 U1.36-201ENST00000620684 176 ntBASIC1.37□□□□□ -2.19
VGLL1Q99990 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VGLL1Q99990 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.36□□□□□ -2.19
VGLL1Q99990 SNORD68-201ENST00000363214 84 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 Y_RNA.357-201ENST00000365487 109 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 Y_RNA.432-201ENST00000384087 111 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 RNU6-768P-201ENST00000384683 107 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 MIR548A2-201ENST00000384956 97 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 MIR548M-201ENST00000408260 86 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 AC006461.1-201ENST00000412637 326 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 CALM2P4-201ENST00000430810 426 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.36□□□□□ -2.19
VGLL1Q99990 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.36□□□□□ -2.19
VGLL1Q99990 RNU6-1299P-201ENST00000516316 100 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 SNORD116-25-201ENST00000516517 92 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 Y_RNA.703-201ENST00000516846 111 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 RNU6-1116P-201ENST00000517269 99 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 AC022254.1-201ENST00000567857 235 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 AC087685.1-201ENST00000587507 141 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.36□□□□□ -2.19
VGLL1Q99990 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
VGLL1Q99990 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
VGLL1Q99990 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
VGLL1Q99990 RNA5SP276-201ENST00000362580 94 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 Y_RNA.265-201ENST00000364677 108 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 RNU6-449P-201ENST00000383914 107 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 RNU6-424P-201ENST00000384367 105 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 RNU6-131P-201ENST00000391144 107 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 U8.16-201ENST00000391279 133 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 MLLT10P1-201ENST00000418346 262 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.35□□□□□ -2.19
VGLL1Q99990 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.35□□□□□ -2.19
VGLL1Q99990 AC003989.2-201ENST00000440224 169 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 AL392103.1-201ENST00000447000 198 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 RNU7-197P-201ENST00000458836 62 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 RPL23AP42-201ENST00000471152 471 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 AC007751.1-201ENST00000529260 376 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 MIR3618-201ENST00000580330 88 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 MIR378D2-201ENST00000580636 98 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 DNAJC19P2-201ENST00000593340 302 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 AC120024.3-201ENST00000603167 156 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 AC021506.2-201ENST00000612354 169 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 Y_RNA.778-201ENST00000620203 90 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.35□□□□□ -2.19
VGLL1Q99990 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
VGLL1Q99990 RNU6-1082P-201ENST00000364574 107 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 SNORD48-201ENST00000364953 64 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 Y_RNA.337-201ENST00000365312 102 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 RNU6-597P-201ENST00000365620 102 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 Y_RNA.400-201ENST00000383963 111 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 RNU6-997P-201ENST00000384725 107 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 RN7SKP200-201ENST00000410564 320 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 snoU13.27-201ENST00000459278 104 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 SNORD45.4-201ENST00000516629 73 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 RNA5SP168-201ENST00000516642 112 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.34□□□□□ -2.19
VGLL1Q99990 MIR4299-201ENST00000577899 72 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 MIR4662B-201ENST00000579498 81 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 AC006441.5-201ENST00000612680 209 ntBASIC1.34□□□□□ -2.19
VGLL1Q99990 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.34□□□□□ -2.2
VGLL1Q99990 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
VGLL1Q99990 RNU6-151P-201ENST00000364158 107 ntBASIC1.33□□□□□ -2.2
VGLL1Q99990 RNU6-268P-201ENST00000364174 107 ntBASIC1.33□□□□□ -2.2
VGLL1Q99990 RNU6-1336P-201ENST00000383886 109 ntBASIC1.33□□□□□ -2.2
VGLL1Q99990 Y_RNA.393-201ENST00000383936 102 ntBASIC1.33□□□□□ -2.2
VGLL1Q99990 SNORD61-201ENST00000384252 73 ntBASIC1.33□□□□□ -2.2
VGLL1Q99990 MIR194-1-201ENST00000384892 85 ntBASIC1.33□□□□□ -2.2
VGLL1Q99990 MIR569-201ENST00000385228 96 ntBASIC1.33□□□□□ -2.2
VGLL1Q99990 AC023449.1-201ENST00000454464 154 ntBASIC1.33□□□□□ -2.2
VGLL1Q99990 RPS29P11-201ENST00000496507 171 ntBASIC1.33□□□□□ -2.2
VGLL1Q99990 AC114811.1-201ENST00000507207 168 ntBASIC1.33□□□□□ -2.2
VGLL1Q99990 Y_RNA.666-201ENST00000516187 112 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 251.3 ms