Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 RNA5SP118-201ENST00000410385 109 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 RNU2-59P-201ENST00000410482 191 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 MCFD2P1-201ENST00000417812 300 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 AL358176.2-201ENST00000425769 204 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 RPS3AP52-201ENST00000435639 297 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 SEPT7P4-201ENST00000437076 306 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 MTND3P10-201ENST00000450967 341 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 MIR18B-201ENST00000454574 71 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 RNA5SP227-201ENST00000516184 113 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 AC024405.2-202ENST00000532731 184 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.11□□□□□ -2.43
VAT1Q99536 MIR5190-201ENST00000581537 80 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 AC005899.2-201ENST00000584353 90 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 AP003357.1-201ENST00000604497 148 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 AC006441.5-201ENST00000612680 209 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 MIR6740-201ENST00000618268 113 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 AC010332.2-201ENST00000613083 1904 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 SNORA36.1-201ENST00000363424 132 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 RNA5SP117-201ENST00000365294 118 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 SNORD116-1-201ENST00000384335 95 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 SNORA69.1-201ENST00000390904 137 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 SNORD72-201ENST00000390994 80 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 MIR548F5-201ENST00000408421 86 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 RNU6-710P-201ENST00000410424 105 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 snoU13.16-201ENST00000459350 104 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.12□□□□□ -2.43
VAT1Q99536 RPL23AP54-201ENST00000495129 419 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 MIR5188-201ENST00000583467 113 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 SNORD92-201ENST00000585078 85 ntBASIC-0.12□□□□□ -2.43
VAT1Q99536 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.12□□□□□ -2.43
VAT1Q99536 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.12□□□□□ -2.43
VAT1Q99536 SNORD114-5-201ENST00000362928 70 ntBASIC-0.13□□□□□ -2.43
VAT1Q99536 SNORD114-26-201ENST00000363543 72 ntBASIC-0.13□□□□□ -2.43
VAT1Q99536 SNORA63C-201ENST00000364578 129 ntBASIC-0.13□□□□□ -2.43
VAT1Q99536 AL603910.2-201ENST00000407268 136 ntBASIC-0.13□□□□□ -2.43
VAT1Q99536 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.13□□□□□ -2.43
VAT1Q99536 RNU7-185P-201ENST00000459215 60 ntBASIC-0.13□□□□□ -2.43
VAT1Q99536 RNU6-470P-201ENST00000515954 104 ntBASIC-0.13□□□□□ -2.43
VAT1Q99536 RNU7-156P-201ENST00000517214 74 ntBASIC-0.13□□□□□ -2.43
VAT1Q99536 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.13□□□□□ -2.43
VAT1Q99536 AC022441.3-201ENST00000605737 136 ntBASIC-0.13□□□□□ -2.43
VAT1Q99536 SNORA24-201ENST00000384096 131 ntBASIC-0.14□□□□□ -2.43
VAT1Q99536 MIR181A1-201ENST00000385026 110 ntBASIC-0.14□□□□□ -2.43
VAT1Q99536 MTND1P29-201ENST00000448112 647 ntBASIC-0.14□□□□□ -2.43
VAT1Q99536 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.14□□□□□ -2.43
VAT1Q99536 AC133485.4-201ENST00000561835 220 ntBASIC-0.14□□□□□ -2.43
VAT1Q99536 AC127455.1-201ENST00000565496 145 ntBASIC-0.14□□□□□ -2.43
VAT1Q99536 MIR6755-201ENST00000619993 66 ntBASIC-0.14□□□□□ -2.43
VAT1Q99536 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 U8.7-201ENST00000364940 136 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 AL590004.1-201ENST00000405321 300 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 MIR1197-201ENST00000408818 88 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 AC236972.2-201ENST00000434979 310 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.15□□□□□ -2.43
VAT1Q99536 RPS29P25-201ENST00000481709 171 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 RNU7-115P-201ENST00000516433 55 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 AC245505.1-201ENST00000556398 224 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 AL355297.3-201ENST00000604082 446 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 AC011476.5-201ENST00000615594 130 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 AC134878.1-201ENST00000619901 243 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 AC022079.1-201ENST00000621546 602 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 AC098679.4-201ENST00000624241 654 ntBASIC-0.15□□□□□ -2.43
VAT1Q99536 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 RNU6-716P-201ENST00000365621 103 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 RNY3P4-201ENST00000384428 101 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 SNORD38B-201ENST00000384690 67 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 MIR1257-201ENST00000408490 117 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 MIR1278-201ENST00000408753 81 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 AF228730.4-201ENST00000421457 183 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 RNU6-307P-201ENST00000516743 106 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 RNU6-448P-201ENST00000517052 107 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.16□□□□□ -2.44
VAT1Q99536 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.16□□□□□ -2.44
VAT1Q99536 PISRT1.1-201ENST00000616930 107 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 SNORD38B-202ENST00000625943 69 ntBASIC-0.16□□□□□ -2.44
VAT1Q99536 SNORA9.1-201ENST00000362412 131 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 MIR588-201ENST00000384900 83 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 MIR518F-201ENST00000384973 87 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 MIR625-201ENST00000385047 85 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 SNORD78.2-201ENST00000391076 69 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 PCNPP3-201ENST00000393579 471 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 MTND1P2-201ENST00000430604 821 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 RNU7-67P-201ENST00000459003 62 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 AC107297.1-201ENST00000459991 176 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 AC091951.2-201ENST00000500762 203 ntBASIC-0.17□□□□□ -2.44
VAT1Q99536 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.17□□□□□ -2.44
VAT1Q99536 PRDX4P1-201ENST00000507189 574 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms