Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 snoU13.25-201ENST00000458945 104 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 MRPS35P2-201ENST00000508242 191 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 RNU6-322P-201ENST00000516010 103 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 AC055872.1-201ENST00000570978 278 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 MIR3664-201ENST00000579074 99 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 AL356055.1-201ENST00000602528 446 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 HSPE1P19-201ENST00000603327 295 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 AC242852.1-201ENST00000612151 96 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 AC244015.1-201ENST00000622301 99 ntBASIC0.81□□□□□ -2.28
SCN2AQ99250 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SCN2AQ99250 Y_RNA.28-201ENST00000362554 111 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 Y_RNA.148-201ENST00000363557 117 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 SNORA33.2-201ENST00000365413 134 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 Y_RNA.370-201ENST00000365589 108 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 SNORA70.7-201ENST00000384159 133 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 RNU6-1065P-201ENST00000384513 106 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 MIR516B2-201ENST00000385190 85 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 MT-TT-201ENST00000387460 66 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SCN2AQ99250 RNU6-496P-201ENST00000516145 99 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 Y_RNA.701-201ENST00000516812 110 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 SNORA18.7-201ENST00000516910 131 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 AC090142.3-201ENST00000519012 385 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 AC136932.1-201ENST00000574771 208 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 MIR4300-201ENST00000581016 96 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 AP001485.1-201ENST00000604799 199 ntBASIC0.8□□□□□ -2.28
SCN2AQ99250 RNU6-450P-201ENST00000364654 107 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 RNU6-1160P-201ENST00000384546 104 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 MIR1298-201ENST00000408783 112 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 RNU2-14P-201ENST00000411053 191 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 AL392103.1-201ENST00000447000 198 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 RNU6-570P-201ENST00000517051 105 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 AP003733.2-201ENST00000529409 171 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 AP003072.1-201ENST00000531740 145 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 RAC1P9-201ENST00000604990 392 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 Y_RNA.11-201ENST00000362375 109 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 Y_RNA.210-201ENST00000364161 110 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 Y_RNA.394-201ENST00000383942 103 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 RNU6-474P-201ENST00000384243 107 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 RNU6-136P-201ENST00000384663 107 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 MIR522-201ENST00000385071 87 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 Y_RNA.587-201ENST00000391210 103 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 SNRPGP14-201ENST00000435400 219 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 RPS26P48-201ENST00000491713 339 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 Y_RNA.721-201ENST00000517207 102 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 AC136628.3-201ENST00000521868 290 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.79□□□□□ -2.28
SCN2AQ99250 MIR2681-201ENST00000581814 105 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 MIR548AY-201ENST00000617669 107 ntBASIC0.79□□□□□ -2.28
SCN2AQ99250 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SCN2AQ99250 UBE2WP1-201ENST00000362030 340 ntBASIC0.78□□□□□ -2.28
SCN2AQ99250 SNORD114-23-201ENST00000363536 72 ntBASIC0.78□□□□□ -2.28
SCN2AQ99250 RNU6-806P-201ENST00000365147 105 ntBASIC0.78□□□□□ -2.28
SCN2AQ99250 RNU6-144P-201ENST00000383951 107 ntBASIC0.78□□□□□ -2.28
SCN2AQ99250 MIR618-201ENST00000385287 98 ntBASIC0.78□□□□□ -2.28
SCN2AQ99250 MIR936-201ENST00000401264 98 ntBASIC0.78□□□□□ -2.28
SCN2AQ99250 HMGN2P32-201ENST00000444648 269 ntBASIC0.78□□□□□ -2.28
SCN2AQ99250 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.78□□□□□ -2.28
SCN2AQ99250 MIR4680-201ENST00000580906 66 ntBASIC0.78□□□□□ -2.28
SCN2AQ99250 RN7SL793P-201ENST00000583259 296 ntBASIC0.78□□□□□ -2.28
SCN2AQ99250 AC006441.5-201ENST00000612680 209 ntBASIC0.78□□□□□ -2.28
SCN2AQ99250 MIR26B-201ENST00000362251 77 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 Y_RNA.26-201ENST00000362539 101 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 Y_RNA.158-201ENST00000363651 101 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 RNU6-899P-201ENST00000363947 107 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 Y_RNA.418-201ENST00000384029 102 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 RNU6-708P-201ENST00000384217 107 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 MIR200A-201ENST00000384875 90 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 RNU6-985P-201ENST00000410182 104 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN2AQ99250 RN7SKP164-201ENST00000516138 266 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 MIR4724-201ENST00000579485 89 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 AL391903.3-201ENST00000612158 163 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 AC008133.2-201ENST00000624540 351 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 snoU2_19.2-201ENST00000363024 80 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 Y_RNA.330-201ENST00000365230 109 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 RNU6-716P-201ENST00000365621 103 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 RNU6-926P-201ENST00000384075 107 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 Y_RNA.537-201ENST00000384626 109 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 RNU7-90P-201ENST00000459216 62 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 AC117454.1-201ENST00000491120 168 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 RNU6-1338P-201ENST00000516328 91 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 SCARNA24.2-201ENST00000516968 130 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.77□□□□□ -2.29
SCN2AQ99250 RPS29P30-201ENST00000600975 111 ntBASIC0.77□□□□□ -2.29
SCN2AQ99250 SNORD113-8-201ENST00000363497 74 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 RNU6-290P-201ENST00000365212 101 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 RNU6-1323P-201ENST00000384025 107 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 RNU6-937P-201ENST00000384325 106 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 MIR15B-201ENST00000385045 98 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 AC005534.2-201ENST00000431047 433 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN2AQ99250 MTND5P22-201ENST00000458380 195 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.76□□□□□ -2.29
SCN2AQ99250 SNORA74.3-201ENST00000517108 154 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 AC131281.1-201ENST00000522984 164 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 RPL23AP91-201ENST00000569211 455 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.76□□□□□ -2.29
SCN2AQ99250 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.76□□□□□ -2.29
SCN2AQ99250 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms