Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 MTND5P40-201ENST00000559945 246 ntBASIC-2.85□□□□□ -2.87
VPS13AQ96RL7 AC012213.4-201ENST00000606457 354 ntBASIC-2.85□□□□□ -2.87
VPS13AQ96RL7 U4.1-201ENST00000620349 87 ntBASIC-2.85□□□□□ -2.87
VPS13AQ96RL7 RNU6-207P-201ENST00000384137 107 ntBASIC-2.86□□□□□ -2.87
VPS13AQ96RL7 RNU6-1310P-201ENST00000384153 107 ntBASIC-2.86□□□□□ -2.87
VPS13AQ96RL7 MTCYBP39-201ENST00000437562 491 ntBASIC-2.86□□□□□ -2.87
VPS13AQ96RL7 AC020550.1-201ENST00000447385 163 ntBASIC-2.86□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.86□□□□□ -2.87
VPS13AQ96RL7 MIR5683-201ENST00000636514 76 ntBASIC-2.86□□□□□ -2.87
VPS13AQ96RL7 MIR562-201ENST00000384894 95 ntBASIC-2.86□□□□□ -2.87
VPS13AQ96RL7 AL122001.1-201ENST00000457027 370 ntBASIC-2.86□□□□□ -2.87
VPS13AQ96RL7 AC112206.4-201ENST00000515142 405 ntBASIC-2.86□□□□□ -2.87
VPS13AQ96RL7 MTND1P35-201ENST00000526739 508 ntBASIC-2.86□□□□□ -2.87
VPS13AQ96RL7 RNU6-855P-201ENST00000410395 104 ntBASIC-2.87□□□□□ -2.87
VPS13AQ96RL7 AL157770.1-201ENST00000623049 439 ntBASIC-2.87□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.440-201ENST00000384120 114 ntBASIC-2.88□□□□□ -2.87
VPS13AQ96RL7 MTND4P3-201ENST00000417829 541 ntBASIC-2.88□□□□□ -2.87
VPS13AQ96RL7 MIR4753-201ENST00000585119 83 ntBASIC-2.88□□□□□ -2.87
VPS13AQ96RL7 AC132825.7-201ENST00000638744 335 ntBASIC-2.88□□□□□ -2.87
VPS13AQ96RL7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-2.88□□□□□ -2.87
VPS13AQ96RL7 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.88□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.88□□□□□ -2.87
VPS13AQ96RL7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-2.88□□□□□ -2.87
VPS13AQ96RL7 RPL30P16-201ENST00000419341 429 ntBASIC-2.88□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.450-201ENST00000384198 113 ntBASIC-2.89□□□□□ -2.87
VPS13AQ96RL7 AC025647.1-201ENST00000517879 253 ntBASIC-2.89□□□□□ -2.87
VPS13AQ96RL7 AL445523.1-201ENST00000451184 1362 ntBASIC-2.89□□□□□ -2.87
VPS13AQ96RL7 RNU6-188P-201ENST00000364207 107 ntBASIC-2.89□□□□□ -2.87
VPS13AQ96RL7 RNU6-142P-201ENST00000384019 107 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 MIR570-201ENST00000384917 97 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Z98949.2-201ENST00000440996 144 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.802-201ENST00000614892 130 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 AC093423.1-201ENST00000440817 142 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 MIR30D-201ENST00000362283 70 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 MIR525-201ENST00000384978 85 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 AP002795.1-201ENST00000534879 84 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.9□□□□□ -2.87
VPS13AQ96RL7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-2.91□□□□□ -2.87
VPS13AQ96RL7 USP9YP28-201ENST00000435142 589 ntBASIC-2.91□□□□□ -2.87
VPS13AQ96RL7 RNU7-13P-201ENST00000516413 62 ntBASIC-2.91□□□□□ -2.87
VPS13AQ96RL7 MIR6773-201ENST00000612812 74 ntBASIC-2.91□□□□□ -2.88
VPS13AQ96RL7 RNU6-641P-201ENST00000384006 107 ntBASIC-2.92□□□□□ -2.88
VPS13AQ96RL7 MTND3P13-201ENST00000574391 343 ntBASIC-2.92□□□□□ -2.88
VPS13AQ96RL7 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.92□□□□□ -2.88
VPS13AQ96RL7 SNORA72.6-201ENST00000384520 129 ntBASIC-2.92□□□□□ -2.88
VPS13AQ96RL7 RNU6-441P-201ENST00000384545 106 ntBASIC-2.92□□□□□ -2.88
VPS13AQ96RL7 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.92□□□□□ -2.88
VPS13AQ96RL7 RNU6-337P-201ENST00000391243 106 ntBASIC-2.92□□□□□ -2.88
VPS13AQ96RL7 Y_RNA.588-201ENST00000391254 102 ntBASIC-2.92□□□□□ -2.88
VPS13AQ96RL7 RNU6-927P-201ENST00000516199 100 ntBASIC-2.92□□□□□ -2.88
VPS13AQ96RL7 MTATP6P18-201ENST00000417994 673 ntBASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 MTCO3P39-201ENST00000514812 518 ntBASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 AC104458.1-201ENST00000608243 463 ntBASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 AC022306.3-201ENST00000619930 550 ntBASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 SNORD115-29-201ENST00000362834 82 ntBASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 SNORD115-11-201ENST00000363616 82 ntBASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 SNORD115-22-201ENST00000364456 82 ntBASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 SNORD115-43-201ENST00000365503 82 ntBASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 SNORD115-36-201ENST00000365629 82 ntBASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 RNU6-571P-201ENST00000384128 107 ntBASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 Y_RNA.509-201ENST00000384506 99 ntBASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 AC026414.1-201ENST00000504046 698 ntBASIC-2.93□□□□□ -2.88
VPS13AQ96RL7 RNU6-690P-201ENST00000365242 106 ntBASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 RNU6-442P-201ENST00000383968 104 ntBASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 RNU6-1201P-201ENST00000384227 107 ntBASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 RNA5SP403-201ENST00000363598 108 ntBASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 Y_RNA.380-201ENST00000365663 111 ntBASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 SNORA40C-201ENST00000391285 128 ntBASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 MIR4464-201ENST00000580818 92 ntBASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 MIR599-201ENST00000385069 95 ntBASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 Y_RNA.665-201ENST00000516177 98 ntBASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 AC020661.2-201ENST00000560114 134 ntBASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 RMST_10.1-201ENST00000616309 154 ntBASIC-2.94□□□□□ -2.88
VPS13AQ96RL7 MIR1283-1-201ENST00000408494 87 ntBASIC-2.95□□□□□ -2.88
VPS13AQ96RL7 MIR548O-201ENST00000408583 114 ntBASIC-2.95□□□□□ -2.88
VPS13AQ96RL7 AC236972.2-201ENST00000434979 310 ntBASIC-2.95□□□□□ -2.88
VPS13AQ96RL7 AC145350.1-201ENST00000567426 208 ntBASIC-2.95□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms