Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CITED4Q96RK1 RNU4-16P-201ENST00000364737 141 ntBASIC2.65□□□□□ -1.99
CITED4Q96RK1 SNORA22-201ENST00000383907 134 ntBASIC2.65□□□□□ -1.99
CITED4Q96RK1 Y_RNA.494-201ENST00000384432 111 ntBASIC2.65□□□□□ -1.99
CITED4Q96RK1 RNU6-360P-201ENST00000390944 104 ntBASIC2.65□□□□□ -1.99
CITED4Q96RK1 RNA5SP136-201ENST00000410906 107 ntBASIC2.65□□□□□ -1.99
CITED4Q96RK1 HMGN2P35-201ENST00000412164 270 ntBASIC2.65□□□□□ -1.99
CITED4Q96RK1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.65□□□□□ -1.99
CITED4Q96RK1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.65□□□□□ -1.99
CITED4Q96RK1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.65□□□□□ -1.99
CITED4Q96RK1 FAM106DP-201ENST00000586416 501 ntBASIC2.65□□□□□ -1.99
CITED4Q96RK1 U4.6-201ENST00000621618 127 ntBASIC2.65□□□□□ -1.99
CITED4Q96RK1 AP003355.3-201ENST00000623465 114 ntBASIC2.65□□□□□ -1.99
CITED4Q96RK1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CITED4Q96RK1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CITED4Q96RK1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CITED4Q96RK1 MIR424-201ENST00000362227 98 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-34-201ENST00000362441 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-12-201ENST00000362583 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORA63.4-201ENST00000362763 126 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-29-201ENST00000362834 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-9-201ENST00000362912 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-21-201ENST00000362963 81 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-14-201ENST00000363090 81 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-13-201ENST00000363358 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-41-201ENST00000363608 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-11-201ENST00000363616 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-5-201ENST00000363633 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-39-201ENST00000363694 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-4-201ENST00000363810 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-16-201ENST00000363887 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-6-201ENST00000363942 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-42-201ENST00000364273 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORA67.1-201ENST00000364749 141 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-15-201ENST00000364809 81 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-1-201ENST00000364961 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-26-201ENST00000365067 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-10-201ENST00000365073 81 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-43-201ENST00000365503 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-36-201ENST00000365629 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 RNU1-138P-201ENST00000384093 164 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 MIR128-1-201ENST00000384921 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 AC005326.1-201ENST00000429197 123 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 RNU7-67P-201ENST00000459003 62 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 UBL5P3-201ENST00000475112 231 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 RPS29P24-201ENST00000486345 171 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORA31.15-201ENST00000516771 132 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 HSPE1P19-201ENST00000603327 295 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 SNORD115-40-201ENST00000606510 82 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 MIR8057-201ENST00000620957 69 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 AC106754.2-201ENST00000623006 233 ntBASIC2.64□□□□□ -1.99
CITED4Q96RK1 RNU6-349P-201ENST00000362402 107 ntBASIC2.63□□□□□ -1.99
CITED4Q96RK1 RNU6-457P-201ENST00000363999 107 ntBASIC2.63□□□□□ -1.99
CITED4Q96RK1 MIR759-201ENST00000390224 91 ntBASIC2.63□□□□□ -1.99
CITED4Q96RK1 AC025518.1-201ENST00000479856 347 ntBASIC2.63□□□□□ -1.99
CITED4Q96RK1 Y_RNA.709-201ENST00000516952 92 ntBASIC2.63□□□□□ -1.99
CITED4Q96RK1 SUMO2P16-201ENST00000519475 264 ntBASIC2.63□□□□□ -1.99
CITED4Q96RK1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.63□□□□□ -1.99
CITED4Q96RK1 MIR3670-2-201ENST00000582974 65 ntBASIC2.63□□□□□ -1.99
CITED4Q96RK1 MIR3670-1-201ENST00000584160 65 ntBASIC2.63□□□□□ -1.99
CITED4Q96RK1 MIR3670-3-201ENST00000584855 65 ntBASIC2.63□□□□□ -1.99
CITED4Q96RK1 MIR3670-4-201ENST00000612260 65 ntBASIC2.63□□□□□ -1.99
CITED4Q96RK1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.63□□□□□ -1.99
CITED4Q96RK1 Y_RNA.35-201ENST00000362601 101 ntBASIC2.62□□□□□ -1.99
CITED4Q96RK1 RNA5SP393-201ENST00000363423 117 ntBASIC2.62□□□□□ -1.99
CITED4Q96RK1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.62□□□□□ -1.99
CITED4Q96RK1 MIRLET7F2-201ENST00000385277 83 ntBASIC2.62□□□□□ -1.99
CITED4Q96RK1 RNY4P18-201ENST00000391107 89 ntBASIC2.62□□□□□ -1.99
CITED4Q96RK1 AL035398.1-201ENST00000430869 322 ntBASIC2.62□□□□□ -1.99
CITED4Q96RK1 RNU2-11P-201ENST00000459191 187 ntBASIC2.62□□□□□ -1.99
CITED4Q96RK1 RNU7-164P-201ENST00000459221 62 ntBASIC2.62□□□□□ -1.99
CITED4Q96RK1 RNU7-96P-201ENST00000459535 64 ntBASIC2.62□□□□□ -1.99
CITED4Q96RK1 RNU6-958P-201ENST00000516995 106 ntBASIC2.62□□□□□ -1.99
CITED4Q96RK1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.62□□□□□ -1.99
CITED4Q96RK1 AC107016.2-201ENST00000547968 190 ntBASIC2.62□□□□□ -1.99
CITED4Q96RK1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.62□□□□□ -1.99
CITED4Q96RK1 uc_338.1-201ENST00000612113 180 ntBASIC2.62□□□□□ -1.99
CITED4Q96RK1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CITED4Q96RK1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CITED4Q96RK1 RNU4-35P-201ENST00000362588 141 ntBASIC2.61□□□□□ -1.99
CITED4Q96RK1 MIR526A1-201ENST00000384897 85 ntBASIC2.61□□□□□ -1.99
CITED4Q96RK1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.61□□□□□ -1.99
CITED4Q96RK1 RNY4P20-201ENST00000516678 93 ntBASIC2.61□□□□□ -1.99
CITED4Q96RK1 DEFB122-202ENST00000569013 197 ntBASIC2.61□□□□□ -1.99
CITED4Q96RK1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.61□□□□□ -1.99
CITED4Q96RK1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.6□□□□□ -1.99
CITED4Q96RK1 RNU6-203P-201ENST00000384038 104 ntBASIC2.6□□□□□ -1.99
CITED4Q96RK1 SNORD17-201ENST00000390930 237 ntBASIC2.6□□□□□ -1.99
CITED4Q96RK1 SNORD123-201ENST00000459473 70 ntBASIC2.6□□□□□ -1.99
CITED4Q96RK1 RNU6-998P-201ENST00000515894 101 ntBASIC2.6□□□□□ -1.99
CITED4Q96RK1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CITED4Q96RK1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CITED4Q96RK1 RNU6-414P-201ENST00000363705 104 ntBASIC2.59□□□□□ -1.99
CITED4Q96RK1 SNORA70.7-201ENST00000384159 133 ntBASIC2.59□□□□□ -1.99
CITED4Q96RK1 MIR570-201ENST00000384917 97 ntBASIC2.59□□□□□ -1.99
CITED4Q96RK1 RNA5SP212-201ENST00000391223 107 ntBASIC2.59□□□□□ -1.99
CITED4Q96RK1 RN7SKP192-201ENST00000411291 327 ntBASIC2.59□□□□□ -1.99
CITED4Q96RK1 PDCD5P2-201ENST00000507570 312 ntBASIC2.59□□□□□ -1.99
CITED4Q96RK1 MIR4287-201ENST00000579398 78 ntBASIC2.59□□□□□ -1.99
CITED4Q96RK1 MIR548AR-201ENST00000582191 57 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms