Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.08□□□□□ -2.24
ZNF558Q96NG5 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
ZNF558Q96NG5 Y_RNA.158-201ENST00000363651 101 ntBASIC1.07□□□□□ -2.24
ZNF558Q96NG5 SNORD14E-201ENST00000364009 85 ntBASIC1.07□□□□□ -2.24
ZNF558Q96NG5 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
ZNF558Q96NG5 Y_RNA.276-201ENST00000364732 109 ntBASIC1.07□□□□□ -2.24
ZNF558Q96NG5 SNORA26.5-201ENST00000391215 123 ntBASIC1.07□□□□□ -2.24
ZNF558Q96NG5 AC002429.1-201ENST00000437672 148 ntBASIC1.07□□□□□ -2.24
ZNF558Q96NG5 NDUFA4P2-201ENST00000489989 244 ntBASIC1.07□□□□□ -2.24
ZNF558Q96NG5 RNU7-43P-201ENST00000516554 64 ntBASIC1.07□□□□□ -2.24
ZNF558Q96NG5 RNA5SP480-201ENST00000516840 109 ntBASIC1.07□□□□□ -2.24
ZNF558Q96NG5 AP003716.2-201ENST00000528260 108 ntBASIC1.07□□□□□ -2.24
ZNF558Q96NG5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.07□□□□□ -2.24
ZNF558Q96NG5 HSPE1P19-201ENST00000603327 295 ntBASIC1.07□□□□□ -2.24
ZNF558Q96NG5 MIR373-201ENST00000362273 69 ntBASIC1.06□□□□□ -2.24
ZNF558Q96NG5 RNU6-1048P-201ENST00000364054 107 ntBASIC1.06□□□□□ -2.24
ZNF558Q96NG5 Y_RNA.569-201ENST00000384749 103 ntBASIC1.06□□□□□ -2.24
ZNF558Q96NG5 MIR7-2-201ENST00000384970 110 ntBASIC1.06□□□□□ -2.24
ZNF558Q96NG5 RNU6-121P-201ENST00000410525 99 ntBASIC1.06□□□□□ -2.24
ZNF558Q96NG5 Y_RNA.602-201ENST00000410535 92 ntBASIC1.06□□□□□ -2.24
ZNF558Q96NG5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.06□□□□□ -2.24
ZNF558Q96NG5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.06□□□□□ -2.24
ZNF558Q96NG5 RNU7-21P-201ENST00000459430 62 ntBASIC1.06□□□□□ -2.24
ZNF558Q96NG5 RNU6-764P-201ENST00000516396 105 ntBASIC1.06□□□□□ -2.24
ZNF558Q96NG5 AC005357.1-201ENST00000588399 301 ntBASIC1.06□□□□□ -2.24
ZNF558Q96NG5 AL355297.3-201ENST00000604082 446 ntBASIC1.06□□□□□ -2.24
ZNF558Q96NG5 MIR6857-201ENST00000613267 93 ntBASIC1.06□□□□□ -2.24
ZNF558Q96NG5 RNU6-797P-201ENST00000363101 109 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 Y_RNA.105-201ENST00000363182 111 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 RNU6-899P-201ENST00000363947 107 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 MIR598-201ENST00000384868 97 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 MIR520C-201ENST00000385005 87 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 MIR532-201ENST00000385025 91 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 MTCO2P12-201ENST00000427426 682 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 MTCO1P5-201ENST00000433573 344 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 SNRPGP14-201ENST00000435400 219 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 SNORD123-201ENST00000459473 70 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 SNORA18.7-201ENST00000516910 131 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 MIR4764-201ENST00000580680 88 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 AC008507.4-201ENST00000585464 127 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 PVT1_3.1-201ENST00000620853 95 ntBASIC1.05□□□□□ -2.24
ZNF558Q96NG5 RNA5SP264-201ENST00000363115 107 ntBASIC1.04□□□□□ -2.24
ZNF558Q96NG5 RNU6-442P-201ENST00000383968 104 ntBASIC1.04□□□□□ -2.24
ZNF558Q96NG5 Y_RNA.455-201ENST00000384230 98 ntBASIC1.04□□□□□ -2.24
ZNF558Q96NG5 MTND4LP30-201ENST00000454092 297 ntBASIC1.04□□□□□ -2.24
ZNF558Q96NG5 RNU6-830P-201ENST00000516353 107 ntBASIC1.04□□□□□ -2.24
ZNF558Q96NG5 AC020661.2-201ENST00000560114 134 ntBASIC1.04□□□□□ -2.24
ZNF558Q96NG5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
ZNF558Q96NG5 MIR3171-201ENST00000584270 74 ntBASIC1.04□□□□□ -2.24
ZNF558Q96NG5 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
ZNF558Q96NG5 RNU6-290P-201ENST00000365212 101 ntBASIC1.03□□□□□ -2.24
ZNF558Q96NG5 RNU6-144P-201ENST00000383951 107 ntBASIC1.03□□□□□ -2.24
ZNF558Q96NG5 SNORD38C-201ENST00000384381 69 ntBASIC1.03□□□□□ -2.24
ZNF558Q96NG5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
ZNF558Q96NG5 SNORA75.2-201ENST00000391138 150 ntBASIC1.03□□□□□ -2.24
ZNF558Q96NG5 SNORA75.3-201ENST00000391231 150 ntBASIC1.03□□□□□ -2.24
ZNF558Q96NG5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.03□□□□□ -2.24
ZNF558Q96NG5 SNORD11-201ENST00000459124 84 ntBASIC1.03□□□□□ -2.24
ZNF558Q96NG5 RNU7-41P-201ENST00000515917 61 ntBASIC1.03□□□□□ -2.24
ZNF558Q96NG5 RNU6-1007P-201ENST00000516586 107 ntBASIC1.03□□□□□ -2.24
ZNF558Q96NG5 SNORA40.15-201ENST00000516884 107 ntBASIC1.03□□□□□ -2.24
ZNF558Q96NG5 AC113195.1-201ENST00000579952 141 ntBASIC1.03□□□□□ -2.24
ZNF558Q96NG5 RNU6-770P-201ENST00000363929 105 ntBASIC1.02□□□□□ -2.25
ZNF558Q96NG5 RNA5SP48-201ENST00000363969 126 ntBASIC1.02□□□□□ -2.25
ZNF558Q96NG5 Y_RNA.214-201ENST00000364201 112 ntBASIC1.02□□□□□ -2.25
ZNF558Q96NG5 Y_RNA.242-201ENST00000364473 110 ntBASIC1.02□□□□□ -2.25
ZNF558Q96NG5 RNU6-763P-201ENST00000390865 106 ntBASIC1.02□□□□□ -2.25
ZNF558Q96NG5 ELOCP20-201ENST00000422460 345 ntBASIC1.02□□□□□ -2.25
ZNF558Q96NG5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.02□□□□□ -2.25
ZNF558Q96NG5 RNU7-90P-201ENST00000459216 62 ntBASIC1.02□□□□□ -2.25
ZNF558Q96NG5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.02□□□□□ -2.25
ZNF558Q96NG5 RPL23AP91-201ENST00000569211 455 ntBASIC1.02□□□□□ -2.25
ZNF558Q96NG5 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
ZNF558Q96NG5 MIR4680-201ENST00000580906 66 ntBASIC1.02□□□□□ -2.25
ZNF558Q96NG5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
ZNF558Q96NG5 snoU2_19.2-201ENST00000363024 80 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 RNU6-268P-201ENST00000364174 107 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 RNU6-326P-201ENST00000365480 107 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 RNU6-342P-201ENST00000384521 104 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 MIR200A-201ENST00000384875 90 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 MTCO2P33-201ENST00000402100 465 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 MIR1278-201ENST00000408753 81 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.01□□□□□ -2.25
ZNF558Q96NG5 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 MRPS35P2-201ENST00000508242 191 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 RNU2-31P-201ENST00000516954 155 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 AC131281.1-201ENST00000522984 164 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 CYP3A137P-201ENST00000562436 69 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 MIR5000-201ENST00000577717 103 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.01□□□□□ -2.25
ZNF558Q96NG5 AC134026.1-201ENST00000623249 2239 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 AC008163.1-202ENST00000636004 2889 ntBASIC1.01□□□□□ -2.25
ZNF558Q96NG5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1□□□□□ -2.25
ZNF558Q96NG5 Y_RNA.216-201ENST00000364205 93 ntBASIC1□□□□□ -2.25
ZNF558Q96NG5 SNORD114-24-201ENST00000365029 72 ntBASIC1□□□□□ -2.25
ZNF558Q96NG5 SNORA22-201ENST00000383907 134 ntBASIC1□□□□□ -2.25
ZNF558Q96NG5 SNORA22C-201ENST00000384614 134 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 748.7 ms