Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC010975.2-201ENST00000427781 588 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 MTND1P27-201ENST00000451117 902 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 RNA5SP484-201ENST00000458857 111 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 SNORD123-201ENST00000459473 70 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 RNU7-188P-201ENST00000517063 64 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.1□□□□□ -2.59
SPG11Q96JI7 MIR548AC-201ENST00000585049 88 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 SNORD87-201ENST00000364849 89 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 RNU6-117P-201ENST00000365415 107 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 AC084290.1-201ENST00000434995 374 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.11□□□□□ -2.59
SPG11Q96JI7 AP001282.2-201ENST00000616149 309 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 RNU4-92P-201ENST00000363783 136 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 MIR539-201ENST00000365690 78 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 MTCO1P57-201ENST00000432182 261 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 AP000542.1-201ENST00000448473 371 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 RNU6-430P-201ENST00000517078 107 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 AC026470.2-201ENST00000561492 181 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.11□□□□□ -2.59
SPG11Q96JI7 AC011373.1-201ENST00000607270 237 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 AL354950.2-201ENST00000617939 290 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 AL078596.1-201ENST00000624856 447 ntBASIC-1.11□□□□□ -2.59
SPG11Q96JI7 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.12□□□□□ -2.59
SPG11Q96JI7 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.12□□□□□ -2.59
SPG11Q96JI7 AC107934.1-201ENST00000522215 217 ntBASIC-1.12□□□□□ -2.59
SPG11Q96JI7 AC100767.1-201ENST00000528178 123 ntBASIC-1.12□□□□□ -2.59
SPG11Q96JI7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.12□□□□□ -2.59
SPG11Q96JI7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.12□□□□□ -2.59
SPG11Q96JI7 MIR548AE1-201ENST00000583292 70 ntBASIC-1.12□□□□□ -2.59
SPG11Q96JI7 MTATP6P2-201ENST00000603319 678 ntBASIC-1.12□□□□□ -2.59
SPG11Q96JI7 AC027449.1-201ENST00000608890 407 ntBASIC-1.12□□□□□ -2.59
SPG11Q96JI7 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.12□□□□□ -2.59
SPG11Q96JI7 AC008873.1-201ENST00000625051 138 ntBASIC-1.12□□□□□ -2.59
SPG11Q96JI7 U6.114-201ENST00000636407 96 ntBASIC-1.12□□□□□ -2.59
SPG11Q96JI7 AC007671.2-201ENST00000637344 619 ntBASIC-1.12□□□□□ -2.59
SPG11Q96JI7 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 RNU6-190P-201ENST00000384154 102 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 RNU6-1122P-201ENST00000384449 107 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 SNORA72.6-201ENST00000384520 129 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.13□□□□□ -2.59
SPG11Q96JI7 MTCO1P29-201ENST00000496868 288 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 AC117522.1-201ENST00000509821 380 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 SNORA40.17-201ENST00000517256 115 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 AL163152.1-201ENST00000642001 374 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 SNORD56.4-201ENST00000363883 71 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 MIRLET7B-201ENST00000385140 83 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 RNA5SP261-201ENST00000410536 106 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 USP9YP30-201ENST00000430729 455 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 AC236972.2-201ENST00000434979 310 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 AL353813.1-201ENST00000440700 253 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 RNU6-759P-201ENST00000516740 103 ntBASIC-1.13□□□□□ -2.59
SPG11Q96JI7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.13□□□□□ -2.59
SPG11Q96JI7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.13□□□□□ -2.59
SPG11Q96JI7 RNU4-20P-201ENST00000365601 151 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 RNU6-571P-201ENST00000384128 107 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 RNU6-476P-201ENST00000384726 107 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 MIR29B1-201ENST00000385015 81 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 MIR548H1-201ENST00000408610 102 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 RNU4-61P-201ENST00000411243 107 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 MRPS10P1-201ENST00000448483 130 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 RNU2-13P-201ENST00000515909 113 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 MIR4789-201ENST00000577469 82 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 SNORD115-25-201ENST00000362619 82 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 RNU6-827P-201ENST00000365553 106 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 RNU6-131P-201ENST00000391144 107 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 MIR548H3-201ENST00000408771 118 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 MTATP6P18-201ENST00000417994 673 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.14□□□□□ -2.59
SPG11Q96JI7 MTND1P5-201ENST00000517906 940 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 AC078880.5-201ENST00000617845 421 ntBASIC-1.14□□□□□ -2.59
SPG11Q96JI7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.15□□□□□ -2.59
SPG11Q96JI7 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 SNORA2.1-201ENST00000363089 137 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 RNU6-442P-201ENST00000383968 104 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 SNORA20B-201ENST00000384220 132 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 U8.19-201ENST00000459095 133 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 RNU6-150P-201ENST00000516237 95 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 MIR4756-201ENST00000577874 78 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.15□□□□□ -2.59
SPG11Q96JI7 MIR4308-201ENST00000580634 81 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 AL121655.1-201ENST00000605811 308 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.15□□□□□ -2.59
SPG11Q96JI7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.15□□□□□ -2.59
SPG11Q96JI7 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 SNORD115-23-201ENST00000364461 82 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 RNU6-609P-201ENST00000365459 107 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 RNU6-154P-201ENST00000384306 106 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 RNU6-325P-201ENST00000411132 105 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 TIMM9P2-201ENST00000419324 266 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 AL137792.2-201ENST00000443484 235 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms